Oreochromis niloticus (Nile tilapia): 100695157
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Entry
100695157 CDS
T06104
Name
(RefSeq) nuclear receptor ROR-alpha isoform X3
KO
K08532
RAR-related orphan receptor alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100695157
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100695157
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100695157
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100695157
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100695157
NCBI-ProteinID:
XP_005457436
Ensembl:
ENSONIG00000015603
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Position
LG1:307655..493763
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AA seq
530 aa
AA seq
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MTLQSHVPSCCAEQPEDDSAERAAAGLTQGAVLLFSPRAWIITMYFVISAMKAQIEIIPC
KICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKC
LAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQGHHLLSHPSLGSPSPVESESLS
SHYTLSSTGLTELPDEGGHYVEQNSPEGGSLSSKGDSAGGGEGGGGGFYLDIQPSPDQSG
LDINGIKPEPLCDYGSSNGFFPYCSFSNRDVPPTVPMAELDHLAQIISKSHLETCQYLRE
ELQQMSWQSFLQDEVESYQSKPQEVMWQLCAVKITEAIQYVVEFAKRIDGFMDLCQNDQI
VLLKAGSLEVVFLRMCRVFDSQNNTVFFDGKFAGPEVFKALGCDDFITAVFDFAKSMCSL
HLSEDELALFSAFILLSADRSWLQEKLQVEKLQQKTQLALQHVLQKNQREDEVLNKLRCK
ASALRSLCSRHTEKLCTFRAVYPDIVRTHFPPLYKELFGADLELTLQSSN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgcagtcacatgtaccctcatgctgtgccgagcagccggaggatgacagtgct
gagagagctgccgctggtctcacacagggagcggtgttactgttttctccacgagcctgg
attataactatgtattttgtcatttctgccatgaaagctcagattgaaataatcccctgt
aagatttgtggagataaatcatcagggatccactacggggtcatcacctgtgaaggctgt
aagggtttcttcaggcgtagtcagcagagtaacgccacctactcgtgtcctcgccagaaa
aactgtctgatcgaccgaacgagccgaaaccgctgccagcactgccgtctgcagaaatgt
ctcgctgtgggcatgtcccgagacgctgtaaagtttggtcgcatgtctaaaaagcagcgg
gacagtctgtacgcggaggtgcagaagcaccgcctccagcagcagcagcagcaaggtcac
cacctcttgtcccatcccagcctcggcagcccgagtccagtcgagtccgagtcgctgtcc
tctcactacaccctgtcctccaccggcctcacagagctgcctgatgagggggggcactac
gtggaacagaactcacctgaaggcggatctttgtcatctaagggagactctgcaggagga
ggggaaggaggtggtggggggttctacttggatatccagccgtctccggatcaatccgga
cttgatattaatggcatcaaaccggagcccctgtgcgactatggatccagtaacggcttt
tttccatattgctccttcagcaacagagacgtgccacccacggtgcccatggctgagctc
gatcacttggcccagatcatctccaagtctcacctggagacatgtcagtacctcagggag
gagctgcagcagatgagctggcagagcttccttcaggatgaagtggaaagctaccagagc
aagcctcaggaggtgatgtggcagctctgtgctgtgaagatcacagaggccattcagtat
gtggtggagtttgctaaacgcatcgacggcttcatggatctgtgccagaatgaccagatc
gtactgctgaaagctggctctctggaggtcgtctttctacgaatgtgccgagtgtttgac
tcgcagaacaacactgtcttcttcgatgggaagtttgcaggtcctgaagtcttcaaagct
ttaggctgtgatgatttcatcacggcggtgttcgactttgctaagagcatgtgctcgctg
cacctatcagaggacgagcttgctctcttctcagcgttcattctgctttctgcagaccgg
tcgtggctgcaggagaagctgcaggtggagaagctgcagcagaagactcagcttgctctg
caacatgtgctgcagaagaaccagagagaggacgaagtgctgaacaagctcagatgtaag
gcgtcagcgttgcgttcgctgtgcagtcgacacacggagaagctgtgcacattcagagcc
gtttacccggacatcgttcgaacgcacttccctcctctttataaggagctgttcggtgct
gaccttgaactgaccctgcagagcagcaactga
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