Oreochromis niloticus (Nile tilapia): 100695175
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Entry
100695175 CDS
T06104
Symbol
sox2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100695175 (sox2)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100695175 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100695175
NCBI-ProteinID:
XP_003457401
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Position
LG17:30473315..30476527
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AA seq
322 aa
AA seq
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MYNMMETELKPPAPQTNTGGTGNTNTSGTGNNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGXYGMMQDQL
GYQHPGLNAHNPSQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQTTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEPTAQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggcaacaccaacacgtccggcaccggcaacaaccagaaaaacagccccgagcgggtc
aagagacccatgaacgccttcatggtgtggtcccggggacagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagataagcaagaggctgggcgcagagtggaaactc
ctgtcggagagcgagaaaagacccttcatcgacgaagccaagagactgcgggccctgcac
atgaaggagcacccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggtgggctgctggctccgggaggcaacgggatggggacc
ggggtcggtgtcggggtcggggccgggctgggcggcggagtgaaccagcgcatggacagc
tacgccgcgcacatgaacggctggacgaacgggngctacggcatgatgcaggaccagctg
ggttaccagcacccggggctgaacgcgcacaacccgagccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaactccatgactagctcccagagctacatgaacggc
tccccgacatactccatgtcctactcccagcaaaccacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtgaagtccgagtcgagcagctccagcccgcccgtcgtc
acctcgtcatcccaccgggccgccccgggctgccaaagcggcgatctgagagacatgatc
agcatgtacctgcccggggcggaggtcagcgaaccgaccgcccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatgtaa
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integrated database retrieval system
