KEGG   Oreochromis niloticus (Nile tilapia): 100695661
Entry
100695661         CDS       T06104                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:onl04131]
    100695661 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100695661 (copa)
Membrane trafficking [BR:onl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100695661 (copa)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100695661 (copa)
  Exosomal proteins of bladder cancer cells
   100695661 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 100695661
NCBI-ProteinID: XP_003447511
Ensembl: ENSONIG00000015174
UniProt: I3KDA2
LinkDB
Position
LG18:26265292..26277453
AA seq 1222 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSGSLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAIFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDTDGVTLFDVQQK
RSLATVKISKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDTS
GGEGWGDDAELQLDEDGFMDAPEGLGEEGLGKEEGGGWEVEEDLDLPPELDVPVGAGGGT
EDGFFVPPTKGTSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQT
LSRGRTSYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTAGRF
EDAVERFRVILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKNLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQICR
VTEATEIGKDVIGLRVSPLQFR
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgttaacaaaatttgaaacgaagtcggcccgtgtcaaaggcctgagcttccatcccaaa
cggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgtacacttattgacaaattcgatgagcatgacggtcctgtcagagggattgatttccac
aagcagcagcccctgtttgtgtctggaggggatgactacaaaatcaaggtgtggaactac
aagctgaggcgctgtctcttcaccctccttgggcatcttgactacatcagaaccaccttc
tttcaccatgagtacccctggattctgagcgcttcagatgatcagacgattcgcatttgg
aactggcagtccaggacgtgtgtctgtgtgctgactggccataatcactacgtgatgtgc
gcccagttccacccatctgaggacctggtggtgtcgggcagtttggaccagactgtgcga
gtgtgggatatctccggtttgaggaagaagaacctgtctccaggtgctgtggagacggac
gtgcgcggcatctctggtgttgacttgtttggtgcctctgatgctgttgttaaacacgtc
ctcgagggtcacgatcgtggggtcaactgggcagccttccaccccagcatgcctctcatt
gtgtctggagctgatgacaggcaggtgaagatctggaggatgaatgagtccaaggcatgg
gagctcgatacatgccgtgggcactacaacaacgtgtcctgtgccatcttccacccacgc
caggagctcattctgtccaactctgaggacaagagcatccgggtgtgggacatgtccaaa
aggactggagtacagaccttccgccgtgatcacgatcgcttctgggtgctgggtgcccac
ccaaacctcaacctgtttgctgcaggtcatgacagtggtatgattgtgttcaagctggag
cgtgaacgtccagcctacgccgtacatggcaacatgctttactacgtcaaggatcgcttc
ctccgccagctggacttcaacagcagcaaagacacggctgttatgcagctgcgcagtggg
tctaagttcccagtgttcagcatgtcttataatcccgctgagaacgctgtcctgctctgc
actagagcaaccaacctggagaacagcacctatgacctgtactcaattcccaaagaaagt
gactctcagaaccccgatgcaccggaggggaaaaggtcttctggtctgacagcagtctgg
gtggccaggaacagatttgctgtgttggaccgtatgcattctctgctgattaaaaatctg
aagaatgaaattgtgaagaaagtccaggtgccgagctgtgaggagatcttctacgccggg
acaggctcactgctgctgcgtgataccgatggcgtcacactgtttgacgtgcagcagaaa
cgctccctggccactgtgaaaatctccaaggtcaagtacgtggtgtggagcgcagacacc
agccacgtggctctgctggctaaacacgcaattatgatctgcaaccgtaagctggaaagt
ctgtgcaacattcacgagaacatcagagtgaagagtggagcctgggatgagagtggagtc
tttatctacaccacttccaaccacatcaaatacgccctcacgtctggtgatcatggcatc
atcaggaccctggacctgcccatctatgtgacccgtgtgagaggcaacagcgtttattgc
ctggacagggagtgcaggcctcgtgtgctcaccatcgaccccacagagtaccgcttcaaa
ctggccctggtcaatcgcaaatatgatgaggtgctccacatggtgcgcaatgccaaactg
gtaggtcagtccatcattgcctatctgcagaagaagggctaccccgaagtagcactgcac
ttcgtcaaagatgagaagacgcgctttagcctggctctggagtgtggcaacatcgaggtg
gctctggaggcagccaaagccctggatgagcgcagctgctgggagcgtctgggtgaggca
gcactgctgcagggtcaccaccaggtcgtggaaatgtgctatcagaggaccaagaacttt
gacaagctcaccttcctctacctcatcactggtaacttggccaagctacgcaagatgatg
aagattgctgagatcagaaaggacatgagcggtcactaccaagcagcactctacctggga
gacgtcagcgagagggttagaatcttgaagaactgtggacaaaagtcactggcctacctg
actgcagccacacatgggttggatgaagaggctgaggcactaaaagagacgtttgaccca
gaaaaggagacggtgccagaggttgatcccaatgcacagctcctgcagccacctccaccc
atcaaccctctagacactaactggcctctgctcaccgtttcaaagggcttctttgaggga
gccattgcagcaaaggggaaagctggtcagatggctgccgacttggacatggatacttca
ggaggcgagggctggggagatgatgctgagcttcagctggatgaagatggcttcatggat
gctccggagggattaggagaggaaggattgggaaaagaggaaggaggaggatgggaagtt
gaggaagacctggatcttcctccagagctggatgtaccagttggtgcaggtggaggaaca
gaggacggcttctttgtcccaccaaccaagggcacaagtccaacccagatgtggtgcaac
aattcccagctgccagtggatcacatcctggccggctcctttgaaactgcaatgaggctg
ctccacgaccaggttggagttgtgaactttggcccctataagtcgcttttcatgcagact
ctgtccagaggacgcacttcttacctggggctgccatccctgccctgcctgcgtgggcac
ccacaaaggaactggaaggactgtggagcaaagcaggggctgcctgctgtgggcctgcgt
ctctctgatctcatctcccgcctgcagcagtgctaccagctgaccacagctggacgattt
gaggacgccgttgagcgcttcagagtcatccttctgtctgtacctctgctggtggttgat
aacaaacaggagattgcagaggctcagcagttgattacaatatgcagagagtacatagtg
ggtctgaccatggagactgagaggaagaagctgcctaaagacactttggaacagcagaag
aggttgtgtgagatggctgcttacttcacccactgtaatctccagccagtccacatggtg
ttagtgttgcgcacagctctgaacctcttcttcaaactgcgtaactttaagacagctgca
ggcttcgcacgacgtctcctcgaacttgggcccaagccagatgttgcacagcagactcgc
aagattttggcagcctgtgagaagaacttgacagacgcccaccagttgaactacgacccc
cacaatccatttgacctgtgcgctgcctctttcgttcccctgtaccgcggacgccccgtt
gagaagtgccctctgtctggagcctgctactgccccccttacaaaggccagatctgcagg
gtcacagaggcaacggagatcggcaaggacgtgattggtctgcgcgtgagtccacttcag
ttccgctga

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