Oreochromis niloticus (Nile tilapia): 100695661
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Entry
100695661 CDS
T06104
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100695661 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100695661 (copa)
Membrane trafficking [BR:
onl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100695661 (copa)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100695661 (copa)
Exosomal proteins of bladder cancer cells
100695661 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
100695661
NCBI-ProteinID:
XP_003447511
Ensembl:
ENSONIG00000015174
UniProt:
I3KDA2
LinkDB
All DBs
Position
LG18:26265292..26277453
Genome browser
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSGSLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAIFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDTDGVTLFDVQQK
RSLATVKISKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDTS
GGEGWGDDAELQLDEDGFMDAPEGLGEEGLGKEEGGGWEVEEDLDLPPELDVPVGAGGGT
EDGFFVPPTKGTSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQT
LSRGRTSYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTAGRF
EDAVERFRVILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKNLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQICR
VTEATEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaatttgaaacgaagtcggcccgtgtcaaaggcctgagcttccatcccaaa
cggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgtacacttattgacaaattcgatgagcatgacggtcctgtcagagggattgatttccac
aagcagcagcccctgtttgtgtctggaggggatgactacaaaatcaaggtgtggaactac
aagctgaggcgctgtctcttcaccctccttgggcatcttgactacatcagaaccaccttc
tttcaccatgagtacccctggattctgagcgcttcagatgatcagacgattcgcatttgg
aactggcagtccaggacgtgtgtctgtgtgctgactggccataatcactacgtgatgtgc
gcccagttccacccatctgaggacctggtggtgtcgggcagtttggaccagactgtgcga
gtgtgggatatctccggtttgaggaagaagaacctgtctccaggtgctgtggagacggac
gtgcgcggcatctctggtgttgacttgtttggtgcctctgatgctgttgttaaacacgtc
ctcgagggtcacgatcgtggggtcaactgggcagccttccaccccagcatgcctctcatt
gtgtctggagctgatgacaggcaggtgaagatctggaggatgaatgagtccaaggcatgg
gagctcgatacatgccgtgggcactacaacaacgtgtcctgtgccatcttccacccacgc
caggagctcattctgtccaactctgaggacaagagcatccgggtgtgggacatgtccaaa
aggactggagtacagaccttccgccgtgatcacgatcgcttctgggtgctgggtgcccac
ccaaacctcaacctgtttgctgcaggtcatgacagtggtatgattgtgttcaagctggag
cgtgaacgtccagcctacgccgtacatggcaacatgctttactacgtcaaggatcgcttc
ctccgccagctggacttcaacagcagcaaagacacggctgttatgcagctgcgcagtggg
tctaagttcccagtgttcagcatgtcttataatcccgctgagaacgctgtcctgctctgc
actagagcaaccaacctggagaacagcacctatgacctgtactcaattcccaaagaaagt
gactctcagaaccccgatgcaccggaggggaaaaggtcttctggtctgacagcagtctgg
gtggccaggaacagatttgctgtgttggaccgtatgcattctctgctgattaaaaatctg
aagaatgaaattgtgaagaaagtccaggtgccgagctgtgaggagatcttctacgccggg
acaggctcactgctgctgcgtgataccgatggcgtcacactgtttgacgtgcagcagaaa
cgctccctggccactgtgaaaatctccaaggtcaagtacgtggtgtggagcgcagacacc
agccacgtggctctgctggctaaacacgcaattatgatctgcaaccgtaagctggaaagt
ctgtgcaacattcacgagaacatcagagtgaagagtggagcctgggatgagagtggagtc
tttatctacaccacttccaaccacatcaaatacgccctcacgtctggtgatcatggcatc
atcaggaccctggacctgcccatctatgtgacccgtgtgagaggcaacagcgtttattgc
ctggacagggagtgcaggcctcgtgtgctcaccatcgaccccacagagtaccgcttcaaa
ctggccctggtcaatcgcaaatatgatgaggtgctccacatggtgcgcaatgccaaactg
gtaggtcagtccatcattgcctatctgcagaagaagggctaccccgaagtagcactgcac
ttcgtcaaagatgagaagacgcgctttagcctggctctggagtgtggcaacatcgaggtg
gctctggaggcagccaaagccctggatgagcgcagctgctgggagcgtctgggtgaggca
gcactgctgcagggtcaccaccaggtcgtggaaatgtgctatcagaggaccaagaacttt
gacaagctcaccttcctctacctcatcactggtaacttggccaagctacgcaagatgatg
aagattgctgagatcagaaaggacatgagcggtcactaccaagcagcactctacctggga
gacgtcagcgagagggttagaatcttgaagaactgtggacaaaagtcactggcctacctg
actgcagccacacatgggttggatgaagaggctgaggcactaaaagagacgtttgaccca
gaaaaggagacggtgccagaggttgatcccaatgcacagctcctgcagccacctccaccc
atcaaccctctagacactaactggcctctgctcaccgtttcaaagggcttctttgaggga
gccattgcagcaaaggggaaagctggtcagatggctgccgacttggacatggatacttca
ggaggcgagggctggggagatgatgctgagcttcagctggatgaagatggcttcatggat
gctccggagggattaggagaggaaggattgggaaaagaggaaggaggaggatgggaagtt
gaggaagacctggatcttcctccagagctggatgtaccagttggtgcaggtggaggaaca
gaggacggcttctttgtcccaccaaccaagggcacaagtccaacccagatgtggtgcaac
aattcccagctgccagtggatcacatcctggccggctcctttgaaactgcaatgaggctg
ctccacgaccaggttggagttgtgaactttggcccctataagtcgcttttcatgcagact
ctgtccagaggacgcacttcttacctggggctgccatccctgccctgcctgcgtgggcac
ccacaaaggaactggaaggactgtggagcaaagcaggggctgcctgctgtgggcctgcgt
ctctctgatctcatctcccgcctgcagcagtgctaccagctgaccacagctggacgattt
gaggacgccgttgagcgcttcagagtcatccttctgtctgtacctctgctggtggttgat
aacaaacaggagattgcagaggctcagcagttgattacaatatgcagagagtacatagtg
ggtctgaccatggagactgagaggaagaagctgcctaaagacactttggaacagcagaag
aggttgtgtgagatggctgcttacttcacccactgtaatctccagccagtccacatggtg
ttagtgttgcgcacagctctgaacctcttcttcaaactgcgtaactttaagacagctgca
ggcttcgcacgacgtctcctcgaacttgggcccaagccagatgttgcacagcagactcgc
aagattttggcagcctgtgagaagaacttgacagacgcccaccagttgaactacgacccc
cacaatccatttgacctgtgcgctgcctctttcgttcccctgtaccgcggacgccccgtt
gagaagtgccctctgtctggagcctgctactgccccccttacaaaggccagatctgcagg
gtcacagaggcaacggagatcggcaaggacgtgattggtctgcgcgtgagtccacttcag
ttccgctga
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integrated database retrieval system