Oreochromis niloticus (Nile tilapia): 100695825
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Entry
100695825 CDS
T06104
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100695825 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100695825 (pex1)
Membrane trafficking [BR:
onl04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100695825 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
ABC_tran
nSTAND3
RNA_helicase
AAA_18
NACHT
AAA_5
AAA_28
DUF815
TIP49
AAA_29
ATPase
AAA_33
NPHP3_N
Viral_helicase1
AAA_24
Sigma54_activ_2
Bac_DnaA
AAA_7
RuvB_N
ATP-synt_ab
AAA_23
APS_kinase
Vault
Motif
Other DBs
NCBI-GeneID:
100695825
NCBI-ProteinID:
XP_005478692
Ensembl:
ENSONIG00000002198
UniProt:
I3J1J9
LinkDB
All DBs
Position
LG22:22588944..22601081
Genome browser
AA seq
1248 aa
AA seq
DB search
MFSNQGIQPVTVTFNNAKNCFLHLPLKLISQLSLNENQPLELSCGHGPPVFLTWTQNRAS
SSLDSHKVELCRQLGEKQGLTDGEQGFLRPCHQVSSLDRVFVEPVSADDWEILELHSSAL
ELQLLDQIRVVFQDAVFPVWVDNHTVIFIRIASLSPRVPYGRLEQFTELVVSPKIRAETG
THTHSQLKANPNSESFHRQPNMDFSSPSGPSSESTSSTSNSHQWGGIADLKSLFHHMIKG
AYDPVKEQPPLPEIPALLTDSLYRVCGSPPHSLSTISHVATNAIHIFPWSHSFNARLSEG
HSSITYGLLSKVPSPKEMRDRTKQAMEKKKKPRVTKETATPEGEEVKEEEAMVVRAVCHC
TELFGCKERSKGEIHSGRVWIPEPLASRLNIPAHSTVRIKSVKSAIKVASTICLQPLNPL
PEEDDEEIQTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFALTVLKPEPQTEASD
QLFLLAPTVIQKKDIQVDREPVTTPAVKPGAETPHPELPSLSILGGMDELCRTGFEFISH
SLLGSPLSRELCATGRGLQGGALLITGAKGSGKSTLSQAFCRKAREELDAHVEVVDCKKL
QGKRVETVRQNLMDIFEQAEWRQPSVVLLDDLDHLTRAPASPEHEHGPEALLQQHIAQSL
QDVVDEVMLHSSLVCLIITSQSEHSLHPSLTEVHGSHFIQGFVNIPPPDQAQRVEILRHL
ILRKSCLSVETLQSLDMGAVAKETEGYTPQDLVLLLERAVHANAMQRGHSEQGVCLSWRD
FAQALKGFTPPSLWGVDLHTPSGFGLDRVGGLKEVRQQLMDTILLPAKYPVLFANLPIRH
RSGALLYGAPGTGKTLLARAVSKDSGMNFISIKGPELLSKYIGASEKGVRDVFQRAQAAK
PCILFFDEFDALAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL
LRPGRLDKSLYCPPPDLEARVEILKALTAGVPLAPDVDLEQLAAATAQFTGADLKALLYN
AQLEAVHNSIGTSAPHELTSGSESDMSLSSMIFPNNQGSGSDDSAGEGESGMGLDQSMVV
VEPSELHAENKHHHGNVWRLYFGSSYESELENSKPNSQCISGPSSMNTDFTGGSVCDHAS
SVNPAYMPSLQRGYEELGREQLERLQQEINNIKSNYRKANEECAYVHPAAKQPGLLLRLA
HVNAALAVTKPSLSQADWKRYTKLYEGFGISGDRKSVKFKPGQRVTLA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaatcagggcattcaacccgtaacggtcacttttaacaacgcaaaaaactgc
tttttacaccttcccttgaagctaatatcacagctttccctgaacgagaaccagcctctg
gagttgtcctgtggtcatgggcctccagtgttcctcacctggactcaaaacagagccagc
tctagcctggacagccacaaagtggagctgtgtcggcagctaggagagaagcagggcctg
acagatggagagcagggcttcttaaggccatgtcatcaggtctcatcattggatcgggtg
tttgtggagcctgtatcagctgatgactgggaaatcctggagctccacagttctgcactg
gagctgcaactactggatcagatcagagtagttttccaagatgccgtgtttcctgtgtgg
gtggacaaccacacggtaatctttatccgaatagcttcactttctccacgtgtgccctac
ggtcgcctggagcagttcacagaacttgttgtgtccccgaagatccgcgcagaaactggc
acccacacacattctcaactaaaagccaacccaaactcagaaagttttcacagacagcca
aacatggatttctcctccccttcaggaccatcatcagaaagtacctcctccacctctaac
agccaccagtggggtggcatagcagacctgaaaagcctttttcatcacatgataaagggc
gcttatgacccagttaaggaacaaccgcctttacctgaaatccccgctctccttacggac
tctctgtacagagtgtgcggttcacctccccactctctcagcactataagccacgttgca
actaatgctattcacatctttccttggagccacagtttcaatgccaggctgagtgaaggt
cactcctcaattacatatggccttctctccaaagtcccatcccccaaagaaatgagggac
agaaccaagcaggcaatggagaaaaagaagaagccaagagttactaaggagactgctaca
cctgaaggagaggaggtgaaggaagaggaggccatggtggttagggcagtgtgccattgt
accgagctgtttggatgcaaggaaagaagcaagggagagattcacagtggaagagtatgg
attccagagcctctggccagcaggctgaatatccctgcccattcaacagtaagaattaag
tcagtgaaatcagctatcaaagtagcttctactatttgcctacaacccctaaatccactg
cctgaggaggatgatgaggagatccagacagctttccttggttggctgcacacacagagt
cacgaacctttagcctgtctgacagcacggtctggcaccatcctcctacatggaactgat
gcaaagctagagtttgctttaactgtgctgaaaccagaaccacagactgaagcttcagat
cagctgtttcttctagcacccacagttatccagaagaaagacatacaggtagacagagag
ccagtaaccaccccagctgtgaagcctggagctgaaacaccccacccagaacttccctct
cttagtattcttggtgggatggatgagctttgtagaactgggtttgagtttatctcccat
agccttctgggtagtcccctctcgagagagctgtgtgccactggtcggggacttcaaggt
ggagctcttctcatcactggtgccaaggggagtgggaagagcactctatcccaagccttc
tgcaggaaagctagagaagagctggatgcacacgttgaagtggtagactgcaaaaagcta
caaggcaaaagggtagaaactgtgagacagaatctgatggacatttttgaacaggcagag
tggaggcagccctctgttgttctacttgatgacctggatcatttgacgcgggcaccagcc
tcacctgaacatgaacacggcccggaggcactgcttcagcagcacattgctcaaagcctg
caggatgtggtggatgaggtgatgcttcactctagcctggtgtgtctgatcattaccagc
cagagtgaacactccctccatccctctctgacggaggtacacggttcccacttcatccag
ggatttgtaaacatcccaccacctgatcaggcccagagggttgagatcctgcgccatctg
atcctgaggaagtcctgcctgtctgttgagacgctacagagtcttgatatgggggctgtt
gctaaggagacagagggatacacacctcaagatctagtactgctgttagagcgggctgtt
catgctaacgctatgcaaagaggacacagtgaacaaggtgtgtgtctctcctggagggac
tttgcgcaggctctcaaagggttcacacccccctctttgtggggtgtagacctccacacc
cccagtggatttgggttggacagggtaggagggctaaaagaagtgcgacagcagcttatg
gacaccatactgctccctgctaagtatccggtccttttcgccaatcttcctatccgccat
cgctcaggagctctgctgtatggcgctcctggtacaggaaaaacgctgctggccagagct
gtctccaaagacagcggtatgaactttatcagcatcaagggacctgaacttctgagtaag
tacattggagccagtgagaagggagtccgtgatgtcttccagagggcacaagccgccaag
ccctgcatcctgttctttgacgagtttgacgctctggcccccaggaggggccacgacagc
acaggcgtaaccgaccgtgtggtcaaccagctcctcacccagctggatggagtggaggga
ctgcagggtgtgtacgtgcttgcagccaccagccgaccagatttgattgacccggcgctg
ctgagacctggacggctggacaaatccctttactgccctccccctgacctggaggctcgt
gtggagatcctgaaagctctgactgcaggcgtccccctggctcccgatgttgacctggag
cagctggcagcagcgacagcgcagtttaccggggcagatctgaaagccttactctacaat
gcacagctggaggctgtccacaacagcataggcaccagcgcaccacatgagctgacctct
ggctcagaaagcgacatgagcctttcctccatgatctttccgaacaaccagggcagtggg
tcagacgactcggcgggagagggagagtcaggcatggggctggaccagtccatggtggtt
gtggagcccagtgagcttcatgcagaaaacaaacaccaccacggcaatgtctggagactg
tactttggaagttcttatgagtctgagttggagaattcaaaaccaaactcccagtgcatc
tctggacccagttccatgaacactgactttactggaggatcagtttgtgaccacgctagc
tcagtcaatcctgcgtacatgccctcgctccagaggggatatgaagagcttggccgagag
caactggagcgactacaacaagagattaataacatcaagagcaactacaggaaagccaat
gaagagtgtgcttatgtgcatccagctgccaaacagccaggcctgctgctgcgcctggca
catgtgaacgctgccttggccgtgaccaaaccctcccttagccaagccgactggaagaga
tacacaaaactgtatgaaggctttggcatctcgggagacagaaaatctgtcaaatttaaa
cctggacaacgtgtgactttagcgtga
DBGET
integrated database retrieval system
