Oreochromis niloticus (Nile tilapia): 100695931
Help
Entry
100695931 CDS
T06104
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K19878
ELKS/RAB6-interacting/CAST family member 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100695931
Membrane trafficking [BR:
onl04131
]
Exocytosis
Others
Others
100695931
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100695931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
ATG16
GAS
ATG14
KIF21A_4th
Motif
Other DBs
NCBI-GeneID:
100695931
NCBI-ProteinID:
XP_005478041
Ensembl:
ENSONIG00000012404
LinkDB
All DBs
Position
LG20:17730150..17885174
Genome browser
AA seq
1179 aa
AA seq
DB search
MPLNIRAKPTQSKLSAAAKGSGHTDGNSSHSRFLRSPKHGKGKQAVSSAPGARSGLEPGS
VSGGVPATPSKQTGGQGSVSRPGSKIKADPEAGKGSTRGSATAPGGKTMSMENIQSLSAA
YATSGTMYPSERESLEPSGGYPKGTMTLGRSTSRSSYTGRTTATGSSPNITSSGMHHLSD
PCEDQSFLSGGTSSLRRQSGRHTQIMNSARCGEVSTFDLHSQLRDLQRENNNLRRELEGG
RDGRTGPSMNSVNFWSPDLKREKGVRREEGVRSSIVKDQYRTNQEDLQPGNNRRNKQLPL
TVQELQEELRAHREMNSRSQHHRQQGNSYRELHMDQDLRGGLSPGHSPRQSPSNLQSPGP
KSSPRASPSNTYNPRQQEADIIIHSPGYGCNTAVAAQRISPADTLQRGLRSSPNQPLYSP
SQGPGIVPSSGSLHPCSPCQVPGCDGFSSPPPLVPSEENFFQLQSEHERQAKELSLLRKT
MEEMEMRIDSQKQTLGARDESIQRLLEMLQGQSQGQGQGHWGRGQRTGIITMAAQEAEAQ
LENVHLREDTKISSMERNIRDLEDEVQMLKTSGLLHSDERQDELKHVEVYKSHSKFMKTK
EQALSPCVSSIRPAPTFLPTQQPWITEQAEIEQLKQELNRKESEMQALQTKLETLTNQNS
DCKQHIEVLKESLSAKEQRANTLQTEVDALRVRLEEKEQFLTKKTKQLQDLTDEKSTLTG
EIRDMKDMLDVKERKIIVLQKKIENLLEQLKDKDKQVAGLRERVQGLQTDSSNTDTALAT
LEEALSEKERVIENLREQKDREDRVRLEELEQLRKENHELKDKLSVMQPQKQPQNQPGNP
SPSQNQRPDGEVKTKVDGPPAMSPTIQTTEEAVKICPDITDRLRVLEQEVGRYREESRKS
QAEVERLMGALKDAEMDKSCKEKKISDLERHGQIKSPNIQKQTVPGEMRKDALIDGHPHS
LSQLPLLASQDAMRDTAERIMELERALRESMNTSAHREALWAQEEAARVQAQRQLEELMG
ALEKTRQELDATKLRLSSTQQSLHERDGHLNSLRQERRKQLEEILEMKQQALLAAISEKD
ANIALLELSSSKRKKAQEEVMALKREKDRLMHQLKQQTQSRMKMIADNYEEDYIHPQHHP
HHSHHMHPANVHHRSLPRAPPHANHRPPMEQDDEEGIWA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaaatattagagccaagcccacacagagcaagctttctgctgctgcaaagggt
agtgggcacaccgatggcaactcatctcattcacgtttcttaaggtcccctaaacacggg
aaaggcaaacaggctgtaagctcagcaccaggggcccgttcagggttagaaccaggctct
gtgtcaggaggtgtgcctgcaacaccatctaaacagactgggggacaagggtcagtgtca
aggccaggttcaaaaatcaaagctgacccagaagcaggcaaagggtcaacgcgtggttca
gcgacagcaccagggggtaaaaccatgtctatggagaatattcagtctttgagtgctgca
tatgccacatcaggtactatgtatcccagtgaacgggagtccttggaaccctctggtggg
taccccaaaggcaccatgacactaggtagaagtaccagccgctcctcctacactggccgg
acaacagctacgggaagcagcccaaacatcacatcttctgggatgcatcacttgtcagac
ccttgtgaagaccagagttttctttctggagggacttctagtttacggcggcagtctgga
aggcacacacagataatgaattcggctcgatgtggagaggtttccacatttgatctccat
tctcagctgagggatctgcagagagagaacaacaacctgcggagagaactggaaggaggt
agggatggaaggacaggccccagcatgaacagcgtcaacttttggagcccagatttaaag
agagaaaagggcgtgaggcgagaggagggagtgaggagctccattgtgaaagaccagtac
aggacaaaccaagaagatttgcagcctgggaataacagaagaaacaagcagcttccatta
acagttcaggagcttcaggaggagctgagggctcatagagagatgaacagtcgctcccag
caccaccgtcagcaggggaactcctatcgagagctccatatggaccaggacctcagaggg
ggactcagccctggccacagtcccagacaaagccccagcaacctgcagagtcctggacca
aagagcagccccagagccagcccatccaacacctacaatccaaggcaacaggaagctgac
atcatcattcacagccccggatacggctgtaacactgcagtagccgcacaaagaatcagc
ccagctgacactcttcagcgtgggctgaggagcagcccaaatcagcctctctacagtcct
agccaaggtcccgggattgtacccagctctggttctctccacccttgtagtccctgtcag
gtgcctgggtgtgacggcttttcctcacctcctcccctggttccatcagaggagaacttc
ttccaactgcagtcagagcacgagcggcaggccaaggagctatccctgctgaggaaaacc
atggaagagatggagatgagaattgattctcagaagcagacgctgggtgcccgggacgag
agcatccagagactgttagagatgcttcaaggccaaagccaaggtcaaggtcagggacac
tggggacggggacagcggacaggcataataaccatggcagcgcaggaggctgaagcccaa
ctggagaacgtgcatttgagagaggacaccaagatctcttccatggagaggaacatcaga
gacttagaggatgaagtccagatgctaaagaccagcggcctgctgcactctgatgagagg
caggatgagctcaagcacgtggaggtctacaagagccattctaaattcatgaagactaag
gagcaggccttgtcaccatgtgtgtcttccatcagaccagctcccaccttcctccccacc
caacagccttggatcacagaacaagcagaaatagagcagctgaagcaggagctgaacagg
aaggagtctgagatgcaggcgctgcagaccaaactagaaacactgaccaatcagaactcg
gactgcaagcagcacatcgaagtgctaaaagagtcgctcagtgccaaggagcagcgcgcc
aatacactccagacagaggtagatgctctgcgagtgcgtttggaggagaaggagcagttc
ctgaccaagaagaccaaacagctgcaggacttgactgatgaaaagagcacactaacggga
gaaatcagagacatgaaggacatgctggacgtcaaggagaggaagattattgtcttgcag
aaaaaaattgagaacctgttggaacagttaaaggacaaagacaaacaggtggctggattg
agggaaagggttcagggccttcaaaccgactccagcaacacagatacggctctggctaca
ctggaagaagctttatcagaaaaggagcgagtgattgaaaacctacgggaacaaaaggac
cgggaggacagggttcggctggaggagctggagcagctgagaaaggagaaccacgaatta
aaagacaaactatcagtcatgcaaccccagaaacagcctcagaaccagcccggtaacccc
agcccatcccagaaccagaggccagatggagaggtgaaaaccaaagtagatgggccaccg
gcaatgagccccacgatccaaactacagaggaagcagtcaagatatgtccggatatcaca
gatcgtctgagggtcctagagcaggaagtgggccgttacagagaggagtccaggaagtca
caagctgaagtggagaggctgatgggagccttaaaggatgctgagatggacaaatcctgc
aaggagaaaaaaatctctgatcttgaaagacatggacaaatcaagtctcctaacatccag
aagcagacagtgccaggtgagatgaggaaagacgccctgattgatggacatccccactcg
ttatcacagcttcctcttttggcttcccaggatgccatgcgggacacagctgagcggatc
atggagctggagagggcactgagagaaagcatgaacacctctgcacatagggaggctctc
tgggcacaggaggaggctgcccgggttcaggcccagagacagctggaggaactgatggga
gctttggagaagacacgccaggagctggacgccacaaaactgcgtctgtcctccactcag
cagtcgctgcatgaaagagacggacatctgaacagtctgcggcaggagagacgcaagcag
ttggaggagattctggagatgaagcagcaggctttgcttgcagccatcagtgaaaaggat
gccaacatcgccctgctagaattatcctcctccaaacgcaagaaagcccaggaggaagtg
atggctctgaagagggagaaggacaggctcatgcaccagctcaaacagcagactcaaagc
agaatgaagatgatagctgataactacgaggaagattacatccatccccagcatcaccct
catcattcgcaccacatgcacccagcaaatgtccatcaccgaagcttgccaagagcaccc
ccccacgccaaccaccgaccccctatggagcaggatgatgaagagggaatatgggcatga
DBGET
integrated database retrieval system
