Oreochromis niloticus (Nile tilapia): 100696122
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Entry
100696122 CDS
T06104
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X3
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100696122 (cthrc1)
Cilium and associated proteins [BR:
onl03037
]
Other cilia and associated proteins
Stereociliary proteins
100696122 (cthrc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
100696122
NCBI-ProteinID:
XP_003453532
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Position
LG11:15115849..15121915
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AA seq
229 aa
AA seq
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MSPLTVRLLLLACLALPLYAVEKVRSRGYRKDPDADKYGSCLQGPAGTAGRDGNPGANGI
PGTPGIPGRDGLKGEKGECVTEVFEEPWKPNYKQCAWNSLNYGIDLGKVADCTFTKLRSD
SALRVLFSGSLRLKCKSACCQRWYFTFNGAECTGPLPIESIIYLDQGSPELNSTINIHRT
SSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctcactgtccgcctgctgctgctcgcctgcctggctttgcctctttatgcg
gtggaaaaggtgagaagcagaggctaccgaaaggatcctgacgccgacaagtatggtagc
tgcctgcagggtccagcaggcaccgctggaagagacggtaaccctggggccaacggcatt
cctgggacgcctggtatcccaggccgcgatggactgaaaggcgagaaaggagaatgcgtt
actgaagtttttgaggaaccctggaaacccaactacaagcagtgtgcctggaactcgctg
aactacgggatcgatctgggtaaagtggctgactgcacgttcaccaagctgcgctctgac
agcgccctcagagtcctcttcagtggctccctcagactcaagtgtaagagcgcatgctgc
cagaggtggtacttcaccttcaacggagcggagtgcacaggaccactgcccatagagtca
attatttacttagaccaaggcagtcccgagctcaactcaaccatcaacatccacagaact
tcctcagttgaggggctgtgtgagggtgtcaaagcagggctggttgatgtggcggtgtgg
gtggggacctgcgctgattatccaagaggagacgcatccacaggctggaattctgtatcc
aggattatcatagaggaattgcctaagtaa
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