Oreochromis niloticus (Nile tilapia): 100696292
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Entry
100696292 CDS
T06104
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
100696292 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100696292 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_EndoS
LRR_At5g56370
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
100696292
NCBI-ProteinID:
XP_019202452
Ensembl:
ENSONIG00000008936
LinkDB
All DBs
Position
LG17:complement(32049001..32181889)
Genome browser
AA seq
1669 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGVSR
SWDKKLHSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKK
LTTLKVDDNQLTSLPNTIGSPKPKQGLSLLEELDCSCNELESLPPTIGYLHSLRTFAADE
NFLSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLK
DLAALWLSDNQSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEE
QRQQRMTVAFDFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKSVHAG
HGHQHQLSTGTATSAGTNMEHTHLSKEPYEPPWPLPPKEVTDREMQDFSQTQLMDQGPMH
NSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDKKEST
DEEVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPPGNTHSHTLSHGHPHNPALPPPSKDQ
GPQTHWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWVDAPHYDNTG
FDAEESPLDPPSSTTSQGNPPLGSKPRSSSAHGRRPLLRQDRIVGVPLELDTQTLPFHGN
QRPNQDNDSQSSGHPPQNPWQNWTRTPSPLEDRTAFPSKLDLTPTSSPNPDRKDMDSRLQ
QSTVPLPGSWTYHDNEGEQNRKDQLSVGGVNKVTVVMSKSSDRLSPMMKETRSKFKKSQS
IDEIDIGSYKVYSIPMDSYSSSIEQQTSLDRPELPGSMEQTNMSRSQSAPMLDEEMGYPG
HGSGDQNQRQNQKPAIPQKAYHFDHNYNPQVRWSCEPLVTMDRRVPPPFPNTPDYVNHSS
KALEYLNQPGKTLPKELVSPRYRAYPPLEMFSFPQSPINQDGPPSQQQQPIPSQRSRPGF
LRRADSLVSSTELALFRRVHEAQQEALQESQYRQQADPPLYGRAVYSTPMEHSAMSNMAD
NQSQMLHNKRNGRYDDDYPTYQEQKKPMIGYPTKSLTQRRPLSARSYSTETYGASQARPV
SARPTMAALLEKMPPDYTLATCPEKPPDDTIKVRPVVPQKPEDITSKMPADWRQQLLRHI
EAKRLDRSGVLKHNTLTLGMLCQGGGHGQGRSSTLNFNLYNNTKHEPPAGRWLPLPPPPS
ANATPSQQGGVLDNDQEGVSGSNQWAPYSLGRRDVPPDNMLKKSAHSHNPSHQSHNTMIV
TSSSSSSATTPHRVVGQQGYDGMMSKGGQYNQGMQLSVVPSGGPGQYQGNMSQAPGQAYP
SGGLPMALSQSGNQPQYNPHTSHTSHQPATNPQYHVNQGMGHSNQVVMTTHTNPRPQSAR
CLLQTKGQKSTDGFQEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQHDGP
AASALQPGDKILQANGHSFLHMEHETAVSLLKSFPRTVDLVVLRDSSTR
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggataactactctactttacaactgcagtgtctggaaatgaccactaaacggaagctg
attggccggctggtgccgtgccgttgtttccgtggtgaagaggaagtgatctcagtgttg
gactactcccactgcagcctgcagcaggtccccaaggaaatcttcagctttgagagaact
ctggaggagctctacctagatgccaaccagattgaggaattacccaagcaactcttcaac
tgccaggccttgaagaagctgagcatgccagataacgacctgtccaacctgcccaccacc
atcgccagcctggtgaacctaaaagagctagacatcagtaaaaacggaatccaggagttt
ccagacaatataaaatgctgtaaaggcttgtctgtggtggaagccagtgtcaaccccatc
accaaactcccagatggttttacgcagctcctgaatctgacccagctctttttaaacgat
gccttcctggagtatctgcctgctaactttgggagactctccaaactacggatcctggag
ctgagggagaaccacctgaaaacaatgccaaagtccatccacagactgacacagctcgag
aggctggatctgggtagcaatgaattttctgaagtgccggaggtgttggaacagatccac
aatctgaaggagctatggctggataataactctctgcagactataccaggggtgagcaga
agttgggacaaaaagcttcattcaatagggaagcttcgtcaattgcggtacttggacttg
gctaagaatcgtatcgagacgttggacgcggacatttcgggctgcgaggccttggaagac
ctgctgctatcctccaacatgctgcagcaccttcctgactctataggaatgttaaagaag
ctgacaacactaaaggtagatgacaaccagctgacctcactgcctaacaccattgggagt
ccgaagcccaagcaaggtctgtctctactggaggagttggactgtagttgtaatgagttg
gagtcgctgcctcccaccatcggctacctgcacagcctgagaaccttcgctgccgatgag
aacttcctctcagagctgccccgcgagatcggtaactgcaagaacgtgaccgtcatgtca
ctgcgctccaacaaactggagtttcttcctgatgagatcggacagatgaccaaactgcga
gtccttaacctcagtgacaacaggttaaagaatctaccgtttaccttcactaagctgaag
gacctggcagctctgtggctctctgacaatcagtccaaggctctgatcccactgcagaca
gaagcccacccagaaaccaaacagaaggttttgaccaactacatgtttccccagcagccg
cgacatgatgaggattatcagtcggacagcgacagctttaatcctacgctgtgggaggag
cagcgacaacagaggatgactgtggccttcgactttgaggacaagaaagaagaggaagac
aactctgggaaggtcaaggtggagataaacctaaagcgctatccaacgccctaccctgag
gacctgaagaacatggttaagtcagtgcaaagtcttgtgggcaaaagcgtacatgccgga
catgggcaccagcaccagctgagcacaggcaccgccacctcggcaggaaccaacatggaa
catacacacctcagcaaagagccatatgaaccaccgtggcccctgcctcctaaagaggtg
acagacagagagatgcaggacttctctcagactcagctaatggatcagggaccaatgcat
aactctggcatcgatattcctaagaggaaggacaaagaggacttgacagagagctctgag
gattcaatgggcggctctccgaacgacatccgtatctctgacatgaggcccaccctggtg
gagccaccaatgtacaaaccaaaggtggtgttgctggggaaggataagaaagagtctaca
gatgaagaagttgataaactccactgtctgaaccacagcggctcgtcggccacctactcc
gactactctccctcacagggctcctcgggctcctccaacccgcccggcaacacgcactca
cacacgctgtcgcacggacacccccacaatcccgccctaccgcctcctagcaaggaccag
ggccctcagacgcactggaccaacagacttgcccagtcatttcccaagcccattgactcc
aagcccctgctgtctcagagagaaactcctccatcaggaaccctgcagcaacgtggggat
cggcgtccacttagcgagccttttgactgggttgacgcacctcactacgacaacacaggt
ttcgatgcagaggagtctcctctggaccctccttcatctaccaccagtcagggaaaccct
ccgctgggctctaaacctcgcagctcatcagcacacggccgccgccccctcctcaggcaa
gaccgaatcgtaggggtcccgttggaattggacacccagacactccccttccatggcaac
caacgaccgaaccaggacaatgactcgcaatcctccggacatcctccccagaatccctgg
cagaattggaccaggaccccgagccccctggaggacagaaccgcttttccttccaagctg
gaccttacacctacttccagccccaatcctgatcgcaaggacatggattcaaggcttcag
caaagcacagtgcctttgcccggcagctggacatatcacgacaatgagggggagcagaac
aggaaggatcagctcagtgtaggcggggtcaacaaggtgaccgtggtgatgagtaaaagc
tcagatcgcctgtcccccatgatgaaggagacgagatccaagtttaagaagtcacagagc
atagacgagattgacatcggctcctacaaggtctacagcattcccatggacagctatagt
tcatccattgagcagcaaactagtttggaccgtccagagcttcccggttctatggagcag
accaacatgtcacggtcacagtctgcccccatgttagatgaggagatgggataccccgga
cacggatctggcgaccaaaaccagagacagaaccaaaaacctgccatcccacaaaaggct
taccactttgaccacaactacaacccgcaggttcgatggagttgtgaaccattggtgacc
atggatcgccgggtccctccccctttccccaacacaccagattatgtcaaccactcatcg
aaggctttggagtacctcaaccaaccagggaagacactacccaaagagctagtgagccct
cggtatcgtgcttatccacccttggagatgttttctttcccccagtcgccaatcaaccaa
gatggtccgcccagccagcagcagcaaccaatcccaagtcagcgctccagaccagggttt
ctaagaagagcagactcactggtgagctctacggagctcgccttgttccgacgggttcat
gaagctcagcaggaggcgctccaagagtctcagtacagacaacaggcggatccccctctt
tatggccgggctgtctactccacccccatggagcactccgcgatgagtaatatggccgac
aaccagagtcagatgctgcacaacaagagaaacggtcgttatgacgacgactaccccact
taccaggagcagaagaagcccatgattggttatccaaccaagagcctgactcagcggcgt
cccctgtctgccagaagttatagcactgagacctacggagcatctcaggcacgtccagtg
tccgcccgtcccaccatggccgctctgctagagaagatgccacctgactacaccctggca
acctgccccgagaagccacccgatgacaccatcaaagtaagacctgttgtaccccagaaa
cctgaagacatcacctccaagatgcctgccgactggagacaacagctactcaggcacata
gaggcgaaacgactggacaggagtggtgtcctaaagcacaacacgctcacgctgggcatg
ctctgtcagggcgggggtcacggccaggggcgcagcagcactttgaactttaacctttac
aataacactaagcatgagccccctgctggccgctggctgccactacctccacctccgtct
gctaacgctaccccgtctcagcagggtggcgtgctggacaatgaccaggagggggtgtca
ggaagcaaccagtgggctccctattcactaggcaggagggacgtcccacctgacaacatg
ttaaaaaagagcgcccattcccacaacccttcccatcaatcacacaacaccatgatcgtc
acttcctcttcctcctcctcggccactacacctcatcgtgtggtgggtcagcagggctac
gatgggatgatgagcaaaggaggccaatacaaccaagggatgcagctgtcggtggtccca
tccggggggccgggacagtaccaaggcaacatgtctcaagcccctggacaagcttacccc
agcggtggcctgcctatggccctgtcccaatccggaaaccaaccccagtacaacccccat
acctctcacacctcccatcagcccgctaccaatcctcagtaccatgtcaaccagggcatg
ggccatagcaaccaggtcgttatgaccacccacaccaacccacggcctcagagcgctcgc
tgcctgttgcagactaaaggccagaagagcacggatggttttcaggagcagctgtgcgtg
agaatagagaagaaccctggtctcggtttcagtatctctggtggcatcagcggccagggg
aaccccttcaaaccctccgacatgggtatctttgttactagggtacagcatgacgggcct
gccgcctccgccctgcagcccggagacaagatactgcaggctaacggacatagtttttta
cacatggagcacgagacagccgtctctctgctgaagagtttcccgcggacggtggacttg
gtggttctgagagacagcagcacgcgctaa
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integrated database retrieval system
