Oreochromis niloticus (Nile tilapia): 100696380
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Entry
100696380 CDS
T06104
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100696380
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100696380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
100696380
NCBI-ProteinID:
XP_019213512
LinkDB
All DBs
Position
LG4:16282871..16450979
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AA seq
1811 aa
AA seq
DB search
MTSEECPVPLGSISSAGPGQNEEYSSAQADDIIEEMGPGDDVSIGSDLSTLVVPFPELAP
VVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYPEENFTVPSGMTLPAPYYRPEEDDERPFICSLASDNGIMSCTDVPARREGGRICCL
DKEDALHRQALGLSPEPLANSSGAGEAIGLCINWNQYYTRCHTGNTNPHKGAINFDNIVY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSAALYYTLRGKPP
PAGGGRGNRRGGGNVNGERHHLRHPRSFHCPHQNKQDHDSQPLANSISLSVPQNPEDCPI
CALSLKEGVRAVGDSANGEENEEDAVKETSKEENHLEERGDGERKRKRTCFGHCKDLWNG
MRRKLWGIVESKYFSRGIMIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMFTLEMI
LKLTAFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPAL
RRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLL
WAIVTVFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAE
GDANRSYSDDDRSSCNFDDSDKQKDSLHLSDPKICTLTPNGHLDMSPLPAGLFPGERLTF
ALSSRKNSVISLGRANLEQRAVYPGRGYHNWGRPLPPQHHALLTRRSSWNSLGGWPCSSS
SPSASPAFTPTSSRPFYGYGLGGLGGVVGGSLRIRGPRASSSPHHHLHHIQPDEEESLLS
PPAVTPHSLHLPHPMLPGSFGPRRDRRALSLELPHLLQVPGQTHPLQHPLPSMTLNANHR
KKSLSGGMIISSGGNFGGLHQDCNGKTPLSQLLQPPPRHPTEQAGGSNPQSHLMAEVFPQ
VNARSKDREDLDDDIDYSLCFRIQKMLEAYRPDWCETREDWSVFLFSPQNKFRQICQSII
AHKLFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMG
LYMGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRA
PGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDVKNITNKSDC
LQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPITNNNPWMLL
YFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPY
YASYGNMRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPHSLDLALKYCNYFFTSM
FVLEAVLKLIAFGVRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPINPTIIRIMRV
LRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNED
YPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTDVDYACNPSLQF
ISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGA
PGCGGGGWIKD
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggagtgtcctgtgccgctggggagcatttcctcagcagggccagggcag
aatgaggaatacagctcggcgcaggctgatgacatcattgaggaaatgggcccaggtgac
gatgtcagtatcggcagtgacctgagcactctcgtggtgcccttcccagagctagcgccc
gtggtcttcttctgcctcaagcagaccacctgtcctcgcaactggtgcatccgtatggtc
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacactg
ggcatgtaccagccctgtgagaacatcgattgcacctcggaccgctgccagatactacag
gcctttgatgcattcatctacatcttcttcgccttggagatggtggtaaagatggtggct
ctggggatctttggccgtcgctgttacctgggcgacacctggaacagactggacttcttc
atagtcatggcagggatggtagagtactcgctggacctgcagaacatcaacctgtcagcc
attcggacagtgagggttcttcggccgctcaaagccattaacagagtgccaagtatgcgt
atcctggtgaacctgctgctagacactctacccatgctgggcaatgtgctgttgctgtgc
ttcttcgtcttcttcatcttcgggatcatcggggtgcagctgtgggcggggctcctgaga
aaccgttgctaccctgaggaaaacttcactgtcccgtcaggtatgaccctgcctgcgcca
tactaccggccagaggaagatgatgaacgtcccttcatctgctccctggcttccgataat
ggcataatgtcatgtactgacgtgccagcgaggcgcgaaggaggacgcatatgctgcctg
gataaggaggacgctctccacagacaggcgctgggccttagtcctgagcctctggctaac
agcagtggtgctggtgaagcaatagggctatgcataaactggaaccaatattacactcgg
tgccacactgggaatactaacccccacaaaggtgccatcaactttgacaacattgtctac
gcctggattgtaattttccaggtgatcactctagagggctgggttgagataatgtattat
gtaatggatgcccactccttctacaacttcatctacttcatcttactcatcattatcggt
tcattcttcatgatcaacctgtgcctagtggttatcgccacccagttctcagagaccaaa
cagcgggagcaccagctgatgcaggagcaaagggcgcagtgcctgtcctcctccaccttg
gccagcatggctgagcctggagactgctacgaagagatcttccagctggtctgccatgtc
ctccgcaaggctaagaggagatcggcagctctctattacacgctgaggggcaagcccccg
ccggctggtggaggcaggggtaacaggcggggtggaggcaatgtgaacggagaacggcat
catttgaggcatccgagatcgttccactgcccccaccaaaacaagcaagaccacgactct
cagccactagccaattccatcagtctgtccgtccctcaaaatcccgaggactgccctata
tgtgcgttatcgttgaaggagggggtgagggctgtgggagattccgccaatggcgaggaa
aatgaagaggatgcggttaaggagacgagcaaagaggagaaccacttggaggagagggga
gatggagagaggaagcggaaaaggacgtgctttggacattgtaaggacctctggaacggt
atgaggaggaagctttggggcattgtggagagcaagtacttcagcaggggcattatgatt
gctattctcattaacaccatcagtatgggcatcgagcatcacaaccagcctgaggagctg
accaatgtcctggagatctgtaacatcgtcttcaccagcatgttcacgctggagatgatc
ctgaagctcactgcctttggcttctttgaatacttgaggaacccgtataacatctttgat
ggcatcatcgtcatcatcagtgtgtgtgagatcattggccaggcagacggtggtctgtcg
gtgctgaggacattcaggcttttgagggtcattaagctggtgagattcatgcctgcgctg
aggcggcagcttgtggttctgatgaagacgatggacaatgtggccaccttctgcatgctg
cttatgctgtttatcttcatcttcagcatcttggggatgcacatatttggctgtaagttt
agcttgaagacagaagcgggggacactgtgcctgacaggaagaactttgactctttgctt
tgggctattgtcaccgtttttcagattctcacccaggaggactggaatatggtgctgtac
aatggcatggcgtccacctctccctgcgccgctctctactttgtagctcttatgacgttt
ggaaactacgtgctcttcaatttgctcgtggccatcttggttgagggttttcaagcagag
ggtgatgcaaatcgctcctactcagacgatgacaggtcttcctgcaatttcgatgacagt
gacaaacagaaagactccctgcacctatcagacccaaagatatgtaccctgactcctaac
gggcacctggacatgtccccattgcctgccggtttgtttccaggagagaggttgaccttt
gctctcagctccaggaagaatagtgtcatttctcttggcagagccaacctggagcagagg
gctgtgtatccaggtcgaggttaccacaactggggccgtcctctgcctccccagcaccat
gccttgttgactcgccgctctagctggaacagcctaggaggctggccatgctcctcctca
tccccctctgctagtcctgccttcaccccgacttcctcaaggcccttctatggctacggc
ttgggaggtctaggaggggtggtcggaggaagcctgcgaatccgaggtccccgtgcctcc
tcatccccacaccaccacctgcatcatatccagccggacgaggaggagtctcttctctcc
ccacctgccgtcactccccactccctccaccttccacatcccatgctcccaggttctttt
ggacccaggagagaccggagagctctatcgctagagctgccacacctgctccaggtgcct
ggacaaactcaccctctgcagcacccccttccctccatgactcttaatgccaaccacaga
aagaagagcctctctggagggatgataatcagcagcggtggcaacttcggagggcttcac
caagactgtaacgggaagactccactgtcacagctcctccagcccccgcctagacatcca
accgagcaggccggagggtccaatccccagagccacctgatggctgaggtcttcccccag
gttaacgcacggagcaaggaccgagaggacctggatgatgacatcgactatagcttgtgc
ttccgcatccagaagatgttagaagcgtacagaccagactggtgtgagaccagagaagac
tggtccgtcttccttttctccccgcagaacaagttcagacagatatgccaatctatcatt
gctcataagctgtttgactacgtagtactggcctttatcttctccaactgcatcacagtg
gctctggaaaggcccaagatactacagggcagcttggaaagagtgtttcttaccatctcc
aactacatctttactgccatctttgtgggcgagatgacactcaaggtggtttccatgggt
ctgtatatgggggaacaggcttatctgcggagcagctggaacattctggatggtttcctg
gtttttgtgtctttgattgacattgtcgtgtccatggcgggaggggccaagatcctgggt
gtgctcagagtgctcaggctgctcaggacactgcgtcctctcagagtgattagcagagcc
ccaggcctgaaactggtggtggaaactctcatcacctccctcaaacccattggcaacatt
gtgctcatctgctgcgcattcttcatcatctttggtatcctcggggtccagctctttaaa
ggcaagttcttttactgcttgggtcctgatgtcaaaaacatcaccaacaagtctgactgt
ctgcaagccaactataagtgggtccaccataagtacaactttgacaacctgggacaggct
ctgatgtctctgtttgtactcgcctccaaagacggctgggtcaatatcatgtaccacggt
ttggacgctgtgggtgtggaccagcagccgataaccaacaacaacccgtggatgttgctg
tatttcatctccttccttctcatcgtgagcttttttgtcctcaacatgtttgttggcgtg
gtggtggagaacttccacaagtgccgtcaacaccaggaggtggaggaagccaagaggcgt
gaggagaaacgtcagcggcgcatggagaaaaagaggaggaaggctcagaagctgccctac
tatgccagctatggcaacatgcgcctgatgatccacacactgtgcacaaaccactacctg
gacctcatcatcaccttcatcatctgcatcaacgttatcaccatgtccttagagcactac
aatcaacctcattctttggatcttgccctgaaatactgcaactacttcttcacctccatg
tttgtgctggaagcagtgctcaaactcattgccttcggcgtccgtcgcttcttcaaagac
aggtggaaccagttggatctggccatagtgctcctgtcagtgatgggcatcacgctggaa
gagattgagatcagtgctgctctgcccatcaaccccaccatcatcaggatcatgagagta
ctgaggatagcaagagtgctgaagctgctgaaaatggcaacaggaatgagagccctgttg
gatacagtagtccaagccctgcctcaggtgggtaacctgggcctgctcttcatgctgctg
tttttcatctacgccgccttaggagtagagctttttggagaactagtttgcaatgaagat
tacccatgtgagggtatgagtcgtcacgctacctttgaaaactttggcatggcctttctt
acattgtttcaagtctcaacgggtgacaactggaatggcatcatgaaggatacattgcgg
gagtgcccaccagaccacggcactgatgtggactatgcctgcaatccaagccttcagttt
atctcgcccatgtattttgtctccttcgtgctcaccgcccagttcgtgctcatcaatgtg
gtggtggccgtgctgatgaagcacctggacgactccaacaaggaggcccaagaggaggcg
gagatggatgcagaaattgagctggagctggcccagggcaccctctgttgcatgggcgcc
cccggttgcgggggtggggggtggataaaggactag
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integrated database retrieval system
