Oreochromis niloticus (Nile tilapia): 100696387
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Entry
100696387 CDS
T06104
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X2
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03440
Homologous recombination
onl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100696387 (brip1)
03460 Fanconi anemia pathway
100696387 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
100696387 (brip1)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100696387 (brip1)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100696387 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
100696387 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
100696387
NCBI-ProteinID:
XP_005474494
Ensembl:
ENSONIG00000010466
UniProt:
A0A669D8Y9
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Position
LG14:2962709..3006655
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AA seq
1213 aa
AA seq
DB search
MTSSPVEYTIGGVKIHFPCKAYPSQLAMMNLIVRGLNTGQYCLLESPTGSGKSLALLCSA
LGWQHAQFAKLQEGGSTGPDKSQKSDSPTSCKCGCHSKSSRNKATAGDSHAVVDLTVSPS
KDTAQPSTSAQEPMLFPEEERRKQSLASRLSEKFQKSLSSDCAKDDDFQQDRKRIRTAEN
TSRKRQRLEKGVVFTDDEPELENEPAGPQSWNAQTKHQTPGSSSTSYAPESCSQCPCGST
EDAVKDKEKDGRKKTPKIFFGTRTHKQITQITHELKRTVYSGVPMTILSSRDHTCVNPDV
VPHTNRNERCKDLLEAKDGRSCRYYHGVQRMRDQNTLQHVHGLRAAWDIEDLVTLGKRLR
SCSYFAARELMQSAWIIFCPYNYLLDPMIRESMEIDLEGQILVLDEAHNIEDCARESASY
TLDYKSLLMSRDELDSMVNNNIRRSKHELLRGFCYSLINWIQESQSLMSERGYETAGKVW
SGKEIVGIFHTLGITADTFNILKQNLAAVLEKEEHAGVVNGREDVVQIPTISPPTATVLK
NLFMVLDFLFRDSCRFADDYRVALQKSYAWTNQVPPDVPNAQGFIVRPRGRRQTVRVKTE
VLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMDSFSSELGVKFSIQLEANHVINKSQ
VWVGTVGAGPQGRKLCATFQNAETYAFQDEVGGLLLHVCQVMAKGVLCFLPSYKMLDKLR
DRWTKTGLWDKLEQQKTVITEPRGGGGKGDFDELLHTYYSAIKYCEEKDGALLIAVCRGK
VSEGLDFTDDNARAVVAVGIPFPNIKDLQVELKMKYNDLHSKSRGLLPGSRWYEIQAYRA
LNQALGRCIRHRNDWGALVLVDDRYRNNPNKYITGLSKWVRQLVQHHSTFSDAMQSLVAF
SQVQKKMDGAPADRQAISSTISSPSSHLAATAEGHSPPEASEPQIPISCVRLPEPQQDSS
PSADLIFSHTQLKAEQKEKADQLKKQHSPQEEPLPLQKRAALPPYSIFTSTPTNNTFRKP
IFKRSAPSSPGQETCHCSDDKENQQIASASLKTNGSDEARGDPASLAPEPAPVTAPPSCE
NEPPAAGSSDEDEKDQTVFFTPELFEGEGDEGGEQEETKAESRPELVLGAMSTAAVTEEL
LGSEPTHVPGHASALDGQSAVSVSEESAGLSQGKEEEVRGQKQYEEGEGRQTGSRRHRLS
RSRQKVSSTQTGV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcaccagtggagtacaccattggaggggtgaagatccacttcccctgcaag
gcttacccatcccagctggctatgatgaatttaattgtacgaggtttgaacacagggcag
tactgtttactagagtctccaactggaagtggaaagagcttggcgttgctttgttcagct
ctgggttggcagcatgcacagtttgccaaattgcaagaaggaggaagcaccggtccagac
aagagccagaagtccgattcccccacctcttgcaagtgtgggtgtcacagcaaatccagc
aggaacaaggcaacagcaggagacagtcatgctgtggtggacctcactgtgtcaccctcc
aaagacacggctcagccgtcgacttcagcacaagaacccatgcttttcccagaagaagaa
agaagaaaacagtctctagcttctcgactgtcagagaagttccagaaatctctcagctcc
gactgtgcgaaagatgacgacttccagcaagacaggaaacgcattcgcactgcagagaac
acgagccgtaaaaggcagcgactggagaagggagtcgtgttcacagatgatgagccggag
ctggaaaatgagccagcgggacctcagagttggaatgcccagacgaaacaccaaactcct
ggttcttcctctacttcctacgctcctgagtcctgctcgcagtgcccgtgcggttcaacc
gaggatgccgtgaaggataaagagaaagatggcagaaaaaagactccaaagatcttcttt
ggcactcgcacacataaacagataactcagatcacccatgagctgaagcgcaccgtttac
tccggcgtgcccatgaccatcttatccagcagagatcacacctgtgtcaacccagacgtg
gtgcctcacacaaaccgcaatgaacgctgcaaggatctgctggaggccaaggatggaagg
tcctgccgctactaccacggtgtgcagaggatgcgggaccagaacactctacagcacgtc
catgggttgcgggcagcctgggacattgaggacctggtgactctgggcaaacggcttcgc
tcatgctcttactttgctgcccgtgaactcatgcagagcgcctggattatcttctgcccg
tataactacctgctggacccaatgattagagaaagtatggagattgacctggaaggccag
atattggtactggatgaggcccataacattgaggactgtgcgagggagagcgccagctac
acactggactacaagagtctgctgatgtccagagacgagctggacagcatggtcaacaac
aacatccgacgttccaaacacgagctgctcaggggcttctgctacagtctgatcaactgg
atccaggagagccaaagcctgatgtctgagcggggctatgagactgccggtaaagtctgg
agtgggaaggaaatagtgggcatctttcacactttgggcatcactgcggacaccttcaac
attctgaagcaaaacctggcagcagtcttggagaaggaggagcatgctggagtcgttaat
gggagagaagacgtggtgcagattccaaccatcagcccacctactgcaactgtgctcaaa
aacctcttcatggtgctcgacttcctcttcagagacagctgcagatttgctgacgactat
cgtgttgctctgcagaagagctatgcttggacaaaccaggtcccccccgatgtccccaac
gcacagggctttatagttcggccgcgcggtagacgccagactgtccgggtcaagactgaa
gtcctcacactgagcttctggtgccttaaccctgctgtggctttttctgacctgagtggg
tctgtgcacagcattgtgttgacctctggaaccctgtcacccatggactccttttcctct
gaacttggtgtgaaattctccatccagctggaggccaaccatgtgatcaataagtctcag
gtttgggtgggcaccgttggcgcaggacctcaaggcagaaagctctgtgccacctttcag
aacgcagagacgtatgccttccaggacgaagtgggtggcctgctgctccacgtctgccag
gtcatggccaagggtgtgctctgctttttgccttcctacaagatgctggataaactgaga
gaccgatggaccaaaactggtctctgggacaagctagagcaacagaaaacggtgatcaca
gagccccgtggtggtggaggcaagggagattttgatgagctgcttcacacgtactacagt
gccatcaaatactgtgaagaaaaagatggtgcactgctgattgctgtgtgtaggggtaaa
gtgagtgaagggcttgattttacggacgacaacgccagggcagtagtcgccgttggaatt
cccttccccaacattaaagacctccaggtggaactgaagatgaagtacaatgacctgcac
tctaagtcgagaggtcttctcccaggcagtcgctggtatgagattcaggcctacagagcg
ctgaaccaggccctggggaggtgcattcgccacaggaatgactggggagctctagttctg
gtggatgatcggtacaggaataatcctaataagtacatcacaggtctgtctaaatgggtc
cgccagcttgtccagcatcacagcaccttcagcgatgcaatgcagtctttggttgcattc
tctcaggtgcagaagaagatggatggggctcctgctgacaggcaggccatcagctctacc
atctcatctcccagcagccacctagcagccactgcagagggacatagtccgcctgaggct
tcagaacctcagatacctatctcatgtgtcagactacctgaaccccagcaggactcaagc
ccctcagccgacctcattttttcccatacacagttgaaagctgaacagaaagaaaaagca
gaccagttgaagaagcagcacagtccccaagaagagcctctcccacttcagaaaagagca
gcactgcctccgtactccattttcacctccacccccaccaacaacaccttcaggaagccc
atttttaaaagaagtgcaccaagtagtcctggccaggaaacatgtcattgttctgatgac
aaagaaaaccagcagatcgcctctgcatcactgaagactaatggttcagatgaagccaga
ggagacccagccagtctggctccagagcccgctccagtaacggccccgcccagctgtgaa
aacgaaccacctgcagcagggagttcagacgaagatgaaaaggaccaaactgtgtttttt
actccagaactttttgagggtgaaggagatgaaggtggtgaacaggaggagacgaaggca
gagtcacgtccagagttggtcctaggagcaatgagcacggccgcagtgaccgaagagctt
ctcggctccgagccgacccacgtgccaggccacgcctcagctctggatggacagagtgct
gtttcagtcagtgaggagagcgcaggactgtcgcagggaaaggaagaagaagtcagagga
cagaagcagtatgaggagggagagggtagacagacaggcagcagacgtcacaggctgtcc
aggtccagacagaaagtttcctccactcaaacaggtgtctaa
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integrated database retrieval system
