Oreochromis niloticus (Nile tilapia): 100696418
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Entry
100696418 CDS
T06104
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
onl04990
]
100696418 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
onl04990
]
Other domain-containing proteins
Patched domain-containing proteins
100696418 (ptchd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
100696418
NCBI-ProteinID:
XP_003459648
Ensembl:
ENSONIG00000006708
UniProt:
I3JHY0
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All DBs
Position
LG15:complement(27520968..27581757)
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AA seq
925 aa
AA seq
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MCFIGGDGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNFTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFHKVPISYPNTTLKDGRVAFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFCALASQLSTAEVPHAPDQLHIQSLTSFSLWRDFHQTGLLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKNDFITILKGSFLRSPEYQHFTEDIIFSKN
SETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTMLILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcattctactggctgggcttattcgttagcaga
catcccgttttcttcctcaccgtccccgcggtgctcaccatcattttcggatctacagtg
ctgagccgattcaagccagagacggacctggaggtactggtcgccccgactcacagcctc
gccaagatcgagcggagtctcgctaacagcttgtttccaatcgaccagtcaaagcacaag
ctgtactcggatttgcacaccccgggcagatacggcaggctgatcctgctcgccaagtcc
ggggggaacatcctggagctggccgatcaggtcctgcaggtccacaagcaggtgttggat
ttgcgcgtcaattacaagggattcaatttcacgttcgcgcacctctgcgtcttgagccac
agggacaagcgctgcctcctggatgatatcatcaccatcttcgaagacatcaggcaggct
gtgctttccaacagcactttccacaaggtgcccattagttatccgaacacaacattaaag
gatggccgtgtggcctttatcgggcaccagctgggcggcgtgtccttctcacccaacagc
cgtgaccagcaggtcaagtttgctcgtgctgtccaaatcacatactacctccgaaatcac
ggacccgtggtgcaggatgctattgcagagcgctgggagaatgagttctgtgccctggcc
agtcaactgtccacagccgaggtcccccatgcaccagaccagctccacatccagtcactc
acatccttcagtctgtggcgggacttccaccagacaggcctgctggccaagggtgaggtg
ttggtcagtctggtgctggtgctcctggccgccaccatctccagctctatgcgggactgc
ctaagggggaaacctttcctgggactcctgggtgtgctgaccatctgcattgccaatgtg
acagctgcagggatcttcttcatatcagatgggaagttcaactctacactactggggata
ccattctttgcaatgggtcatggaaccaaaggggtgtttgagctgctggcaggctggagg
agaaccagggaaaacctccccttcaaggagcgagttgcagacgcgtttgccgacgtgatg
gtgtgctacactatgaccagctcactctacatcataacctttggcatgggagctagccct
tttactaacatcgagtctgtgaaaatcttctgtcagagcatgtgtgtggccattctggtc
aactacttctatgttttctctttctatggctcctgcctggtgtttgccggacagcttgag
cagaaccgctaccacagtgttttttgctgtaaaatcccctcagtggagtacctggaccgc
cagcccacgtggtttaaaaccatgatgagtgatggccacgacctgtccacacaccatgac
agtgtaccataccagaatcacttcatccaacacttcctgcgagagcactacacggaatgg
attaccaacacctatgtcaaaccatttgtggtcattctctatcttatttatgcttctttc
tcattcatgggatgtttacaaatcagtgatggatcaaatattgtgaacctgttggcgagt
aactctccaagtgtttcgtacgctctgacccagcagaagtactttagtaactacagtcca
gtgattggattttatatttatgaacccattgagtactggaactccacagtgcaggagcac
ttgaagactttgagtcacggtttcaacaagatctcctggatggacaactttttccactac
ctgcgggtagtgaatgtgagtgcgtcaactaagaacgacttcatcaccatccttaaaggt
tccttcttgcgcagcccagagtaccagcacttcacagaggacatcatattttccaagaac
agcgagactgatgaatacgacatcattgcttcgaggatgtacttggtagcgcggaccact
gagaagaaacgtgaggaggtggtggagcttttggaaaagcttcggcccttgatgctgatc
aacagcatcaaattcattgccttcaatccaacgtttgtgttcatggaccggtacagctcc
tctgtcatctcccccattttgacctcaggcttcagcgtactcaccatgctcatcctcact
ttcttcctggtcatcaacccattgggaaacttttggctcatcctcacagttacatccgtg
gagctgggtgtcttgggtttgatgactctctggaatgtcggcatggacagcatctcaatc
ctgtgccttatttataccctcaactttgccatggatcactgtgcaccacacctgtatact
tttgtgctggccaccgagcacactaggacgcagtgcatcaagttggctctggaggagcac
ggggctgccatcctgcagaacacatcctgctttgtgattgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgttcaagtgctccctcctcaccgcgggctgcact
gtgctgcactgctttgtcattttgcctgtcttcctgaccttcttcccgccgtccaaaaag
aggcacaagaaaaagaaacgggccaagcggaaagagcgggagagggaaagggagcgggaa
agagaaagggaaagggaaagggaggagatagagtgcattgaagtcagggagaatccggat
cacgtgacaaacgtctga
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