Oreochromis niloticus (Nile tilapia): 100696470
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Entry
100696470 CDS
T06104
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100696470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100696470
03021 Transcription machinery [BR:
onl03021
]
100696470
03036 Chromosome and associated proteins [BR:
onl03036
]
100696470
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
ARID
100696470
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100696470
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100696470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100696470
NCBI-ProteinID:
XP_005456780
Ensembl:
ENSONIG00000006764
LinkDB
All DBs
Position
LG11:complement(7459834..7477512)
Genome browser
AA seq
2295 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDAKDESVPGEKQPDKKQPGLDGGSPGRGDLQDGADG
GNVGGGGEPEMKNGNGNPPRANNNTPNDSVGPEGNNHPGLVHHHGAAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQHNSHDHGFSNHQFNNYNPFPNRTPYPS
QAYAMNSPRSAQAPTAGGQPAKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLT
SPSSTRGYPNYPSSDYSSQEGASKGPADMGSSGQYGGSNPAWQQRSHHPSPMSPGSAGQP
LARTQPPGSMDPMGKMRGQPYGTSGPYGQQSQQGPSAGPQPGPGYPGQGYAPPGPQRYPV
GMQGRTSGGMGGMPYGPQMASYGQQGAGGYGSQGQAPYYGQPSQAPHPSQQQTPYSQPPP
GQPGGQSPYPGQPHPPQTSTTHTQGGPPYQQPHMPPQSQGPLPGPSQGPPQSQPPYSQAS
APQSGQSPYAQQQGPPSQAQQQPNSQSNPGSQGQSSYPGSIQGPQQPPSQQQQSQSHPQQ
PPGHSQHPQGQPAGYPQNPQQQQAQQSPYQRFPPPPPPQEVSQDSFQSNAPPSTQPKSGP
EDGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHL
PGIRGPSPSPAGSPASASTSRTGPLSPANMPGTQMPPRPSSVQSDGSLHPTMSQSPMAQD
RGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGGYGQQGGQYGPQGY
PRQPNYGNMPNASYPGTGMGSINPMASQGGGPPYAGMPPGRMPPNQMGARPYGPNMGPNM
GPSMGPNMPPNMGNMPPQVSSGMCPPPGMNRKPPDPSAMQHPATNSMHNRMSGYPNMSPG
MMGSGPPYGPPMNSMPGMMNTPGGSPYPMGPNMANNTSGMASSPEMNNKMNNKVDGSVTP
KPESKSKKSNSSTTTSEKITHLYELGPEPERKMWVDRYLAFIEEKAMGMSNLPAVGRKPL
DLFRLYMSVKEIGGMTQVNKNKKWRDLATSLNVGTSSSAASSLKKQYIQCLYAFECKIER
GEDPPPEIFSDNKKNQAAKVQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPH
AQMPPMPPGSRSSVNLQDPFSDGSDPAFPRKNMTPNSNYQSGMNTPDMQGRMGPYEPNKD
PFSNMRKVGEQFLPANQGPNSGMGDQSQQPPPQQQQPPPQQPQQQQQQPPFNRGPPGAMG
TMPMGPRQQYPYGPGYDRRSEQGMGPEGNMGSGVPQPNPMMPANADTGMYSPNRFPSQQP
RHDSYGNQYPGQGTPPTGSYPNQQPGMYTQQPSYKRPGEGGYPPSKRHETDYSGPFPGGQ
QPPQQPQQQGGASAPSSGQQESYNQYSSSGPYPGADRRPPGPGGQFPFPFGRERMQGTTG
PNSQPNMPPQMMQSGPPEGPQGGMWQGPRDMNYQNYPSRQGGPAGPPQGPGYPGMNRAEE
MMPSEQRINHDGQWGGQMGPRQPPYGPAGAGTPMPRSVQSNYQPPQGVQNHIPQVPSPAS
MPRPIESRTSPSKSPFMHGMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPPGSVEATLP
VLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFDLNTLPG
LLELVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPETLKRDWDGTEEEEPRVDDMEQED
EDDDEEEERETEGSSHVKEEEDQKQCSQGQDEKSKGSSSEQTGSLHTPTAHERPKQASKF
DKFPLKLVRKKDPFAAAQANNHGKIQEFDSGLLHWSAGGGDSTEHIQTHFEPRKDFLEPR
ERIPVPPVLLRRRVLEEEIRENGLPAEEERRKPQDEEEMPKETSSSERSAVSEKSSSSLG
SEEERKTDCEAKTVEKGSKSHQENNRPIPSSGSFLTQQAQQNGTILEDEPHSKDEGPLVA
LTNWQDSLARRCICVSNIVRSLSFVPGNDHEMSKHPGLLLILGRLILLHHRHPERKQAPL
TYEKEEDSDEGVGQRDEWWWDCLELLRENTLVTLANISGQLDLSIYSESICLPLLDGLLH
WAVCPSAEAQDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGN
LVRLIGDRKVAVCREMAVVLLANLAQGDTLAARAIAVQKGSVGNLLGFLEDSLAATQLHQ
SQSSLLHLQGMPFEPTSPDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSL
VSHVICDVLFLIGQS
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagtccgccgtccgaactcaaa
aagccggatcgagacgccaaggacgagtcggttccgggagagaagcagccagacaaaaag
caaccgggcttggacggcggatcgccgggaaggggggatctgcaggacggggccgacggt
ggaaatgtagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataataccccgaatgactctgtcggaccggagggaaataaccaccccggtttg
gtgcatcaccacggcgccgcttttcctccaccttcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgttcagtcgagcaacatgatggacccttatcaacataattcacacgaccatggc
ttttcaaatcaccagttcaacaattataacccattcccgaacaggactccgtatcccagc
caagcgtacgccatgaactctcctcgcagcgcccaggcgccgacagctggggggcaacca
gctaagcagcagccaccagcgggaggacccacggcaatggctggatcttacagtaatcag
agatataacattggaaaccctcaacctacatccacaccgacactcaacaagctcctaacc
tctcccagctcaacgcggggatatccaaactatccgtctagcgactatagtagccaagaa
ggagctagcaagggaccagcagacatgggcagtagcggtcagtatggagggagcaatccg
gcttggcaacaaaggagccatcacccgtcgcctatgagccctggaagtgctgggcagccg
ttagcaagaacccagcctcctggttccatggaccccatgggaaaaatgaggggtcagcca
tacggaacaagcggcccatacggtcagcagtcacagcaagggccttcagcaggtccacaa
ccagggcctggttaccctggacagggttatgccccgccaggtccccagagatatccagtg
ggaatgcaaggccggacctctggaggcatgggtggcatgccatatggtccacagatggca
tcttatggccagcagggagcaggaggctatggctctcagggccaggcaccctattatggc
caaccaagccaggctcctcacccaagtcagcaacaaaccccatattcacagcctccacct
ggacaacccggtggccagtcaccttacccaggtcaaccccatccccctcagacttctact
acacacacccagggaggaccaccttatcagcagccccacatgcccccacagtcccagggg
ccactgccaggcccatcccaagggcccccacagtcacagcccccttattctcaagcttca
gccccacagtctggtcagtctccctacgcccagcagcagggtcctcccagtcaggcccag
cagcagcctaactcccagtctaaccctggatcgcaaggccagtccagctacccaggatca
atacaggggccccagcagccaccctcacagcaacagcaatcacagtctcatccacagcag
ccaccaggacacagccagcacccacaagggcagcctgcaggttacccccagaaccctcaa
cagcagcaagcacaacagtcaccttatcagcgctttcctcctcctcctcctccgcaggag
gtatcccaggactcatttcagtccaatgcgcctccatccactcagcctaaatctggtcca
gaggacggtcaaggccgcccctccagccttccggacctgtcggggtccatcgatgacctg
cctaccggtacagagggcgccctgagtcccggcgtgagcacgtcaggcgtgtcgagcagc
cagggcgagcagagcaaccctgctcagtcacccttctctcctcacacgtccccacacctg
ccaggcatccgagggccttcaccttccccggccggttcccctgccagcgccagcacatcc
cgcacaggaccgctgtcacctgccaacatgccagggacccaaatgcctcccagaccgtca
agtgtgcagtcagatgggagcctacaccctacaatgagccagtctcctatggcccaggac
agagggtttatgcagagaaaccctcagatgcccccttatggctccccccaatcagcctct
gcactgtcaccacgccagtcctctgggggacagatgcaccctgggatgggcccatatcag
cagaacaactccatgggaggctacgggcagcagggaggacaatatggccctcaaggttat
cctcggcaacctaactatggcaacatgcctaatgccagctaccctgggactggcatgggc
tcaataaatcccatggcaagccagggtggaggtcctccatatgctggcatgcctccagga
aggatgccccctaatcagatgggggcacggccctatggccccaacatgggtcccaatatg
gggcctagcatgggtccaaacatgcctcccaacatgggcaacatgccaccccaggtgagc
tcaggaatgtgtcctccaccaggaatgaacagaaagcccccggatccctcagccatgcaa
caccctgccacaaactccatgcacaacaggatgtctgggtaccccaacatgtctccaggc
atgatgggctctggcccgccttacggccctccaatgaacagtatgcctggaatgatgaac
actccaggtggatcaccctaccccatggggccaaacatggccaataacacaagtggcatg
gcctccagtccagaaatgaacaataagatgaataacaaggtagatgggagtgtgacgccc
aagccagaatccaaatcaaagaagtccaactcttccaccacaaccagtgaaaagataacg
catctgtacgagttaggaccagagccagagaggaagatgtgggtggaccgttatttggcc
tttattgaagagaaggctatgggcatgagcaacctgcctgctgtaggacgcaaacctctt
gacctctttcggttgtacatgtctgttaaagagatcggaggcatgacgcaggtgaataag
aataagaaatggcgtgatctggccacttccttgaatgtgggtacatccagcagtgctgct
agttctttaaagaaacagtacatccagtgtctgtatgcctttgagtgcaaaattgagcgt
ggtgaagaccccccacctgagatcttttcagacaacaaaaagaaccaagctgctaaggtc
cagccaccctctccagctgggtcaggctctctgcagggtcctcagactcctcagtctacc
agcagctccatggctgaggggggagacttaaaaccccctactccggcctcgactcctcac
gcccaaatgccccccatgccgcccgggtccaggagcagcgttaacctgcaggaccccttc
tctgatggaagcgaccctgcatttccccggaagaacatgacgcccaactccaactatcag
tctggcatgaacacgcccgacatgcaaggtcgaatgggcccgtatgaaccaaacaaagac
ccctttagtaacatgcggaaagttggggagcagtttctacctgctaaccagggtcccaac
agcggaatgggtgatcaatcacagcagccgccgccgcaacaacaacaaccaccaccacag
caaccgcagcagcagcagcagcaacctccattcaacaggggaccgcctggggccatgggc
acgatgccaatggggcccagacagcagtatccttatggaccaggctacgacaggaggtcg
gagcaaggaatgggcccagaaggcaacatgggatctggtgttcctcagccaaacccgatg
atgcctgccaacgccgacacggggatgtattcgccaaatcgcttcccatcacagcagcca
cggcatgattcctatggtaatcagtatcctggacagggaacgccccctactggctcttac
ccaaatcagcagcctggaatgtacacacagcaaccgagttacaagcgtccaggggaaggc
ggttacccaccatcaaaacgtcatgagactgactacagtggacccttccctggtggacag
cagccaccgcagcaaccgcaacagcaaggaggcgcctctgcaccctcttcaggacagcag
gagtcatacaatcagtacagcagcagcgggccctaccctggcgctgatcgccgtccaccc
ggccctggcggtcagttcccgtttccctttggtcgtgaacggatgcaggggacaactggc
cccaattcgcaacctaacatgccccctcagatgatgcagtcaggccctcctgagggtcct
cagggaggcatgtggcagggacctcgagatatgaactatcagaactaccccagccgacag
ggtggccctgcgggtccgccccagggacctggttaccccggcatgaaccgggcagaggag
atgatgccgtcagaacaacgcataaatcacgatggccagtgggggggtcagatgggccct
cggcagcctccttacggtccagccggggctggcacacctatgcctcgctcggtacagtcc
aactaccagccccctcagggggtgcagaaccacattccacaggtgccgagcccagcatcc
atgccccgccccatagagagcaggacatcgcctagcaagtctccctttatgcatggaatg
aagatgcagaaggctggtcccccagtgcctgcatctcacatagtgccccctccagtgcag
tcacctctaataaggcgagacatgccttttcccccaggctctgtagaagctacccttccc
gtcctgaagccacgtcgaagactcaccatgaaagatattggaaccccagaggcctggaga
gttatgatgtcattaaagtccggtttattggctgaaagcacgtgggccttagatactatc
aatatacttctctatgacgacaatagtatttccaccttcgatctcaacacgttgcctggt
ctattagagttggtggttgagtatttccgacgctgcctcattgaaatctttggcatcctg
agggagtatgaggtcggcgaccctggccagagaacactacttgatcctgagaccttgaaa
cgagactgggatggcacagaggaagaggaaccacgggtggatgatatggaacaagaggac
gaagatgacgatgaagaggaagaacgagaaacggaggggtcatctcatgtgaaagaggag
gaagatcaaaagcagtgctctcaaggtcaggacgagaagagcaagggttcatcatctgag
cagacgggctcgttgcacaccccaactgcccacgagagacccaagcaggcgagcaagttt
gacaagtttcccctgaagttggtacgaaagaaagacccatttgccgcagcccaggcaaat
aatcatggcaaaattcaagagtttgacagtggcttacttcactggagcgcaggaggggga
gactcaacagaacacatccagacccactttgagccacgaaaagacttcttggaaccacga
gaacgaatacctgtgccaccggttttactaaggcggagagttctagaagaagagatacgg
gaaaatggtttgcctgccgaggaggagagaaggaagcctcaagacgaagaagaaatgcca
aaagagacctcctcttcagaaagatcggcagtctcagagaagtccagctcctcgcttggc
agcgaggaggagaggaagacagattgtgaggccaagacagttgagaaaggctctaaaagt
caccaagagaataatagacccattccctcctctggcagtttcttgacccagcaggcacag
cagaatggcaccatcctggaggatgagcctcacagtaaggatgaggggccgctcgttgca
ctgactaactggcaagattctttagcccggcgctgcatttgcgtctcaaatattgtccgc
agcctctcctttgttccaggcaatgaccacgagatgtccaagcatccgggactgctgctt
atactgggccgactgatcctgctccaccaccggcacccggagcgcaaacaggccccgctc
acctacgaaaaggaagaggattcggatgagggcgtgggccaaagggacgaatggtggtgg
gactgcttggagctgctgagggagaacacactggtcactttggcaaatatttcaggccag
ctggacctctcgatctactccgaaagcatctgcttgcctctgttggacggcctccttcac
tgggctgtgtgcccctcagcagaagcccaggaccctttccctactctgggaccccacggt
tctttgtcacctcagagacttgtcctggaaacgctcagtaaactaagcatccaagacaac
aatgtggacctcatcttggccactccaccattcagtcggttggagaagctttatgggaac
cttgtgcggctaattggagacaggaaagttgcggtctgtagggagatggctgtagttcta
ctagccaacctggcccagggtgacactctggcagcccgagcaatcgctgttcagaagggc
agcgtgggcaacctgctgggctttctggaggacagtctggctgccacacagctgcaccag
agccagagctctctgctacacctacaagggatgccctttgaacccacgagcccggacatg
atgcggcgagccgcccgggccctgcacgccttagctaaggtggaggagaaccactcagag
ttcacactacacgagtcccgactcctcgacctttcagtgtctcccctcatgaactcgctg
gtttctcatgttatctgtgacgtactctttctgattggccagtcatga
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integrated database retrieval system
