Oreochromis niloticus (Nile tilapia): 100696485
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Entry
100696485 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04371
Apelin signaling pathway
onl04514
Cell adhesion molecules
onl04520
Adherens junction
onl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100696485
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100696485
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100696485
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100696485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100696485
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100696485
04090 CD molecules [BR:
onl04090
]
100696485
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100696485
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Major cadherins
100696485
CD molecules [BR:
onl04090
]
Proteins
100696485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
100696485
NCBI-ProteinID:
XP_019221906
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All DBs
Position
LG13:complement(31568286..31579653)
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AA seq
814 aa
AA seq
DB search
MHHLPSLLTCITTPASRCLPGKVLQLFPCCIRGSGLFSREAQNLPFLQILRGLRCAVISY
GPVTEEDTEFSWCGGLEANSFFFKDFPDGGPPNLVTAEEPACVPGFQSDHLTFSVTRNYL
TRGTVLGKVGFTDCTDRTRFLFDTSDKRFVVKTDGVLMVKRPVFLHEGHHDFFIHSWDSQ
GRKLTIPVSVSMNAADAQVPVLQFPEPGEGLRRRKREWVIPPLSFPENRRGTYPLKVFRR
PCQESRQVRYYSITGPGADLPPIGRFTMDRHTGCLYVTQPLDREETAHYTFEVHTVSDGV
GQAEDPMEIIVNVIDQNDNKPYFTGEYNANVAEATAIGTEVVRVEAKDDDEPDNLNSDLR
YHILNQDPPLPTDNMFEINPVTGSIRVTGRGLDREKYPQYTLTVQAADMAGEGLTGQTKV
ILTVTDSNDNAPVFTQSLYTAIVDENKKDVEVVRMIVTDEDEPQTPAWNAKFKIVSGDPD
GLFTVKTGTNKQEGILSTAKELDFERASKLTLLVSVENEIPFAGVSVVNVKDVNEAPIFD
PKEKLVVKPEDLAVDEVVVQYTASDPDTARKQTVSYKILTDPAGWLNVDKDTGLIKVRRL
MDREATFVTNNRYTATIGAYDNDAVPATGTGTLIIQLEDVNDNAPVVELRDIQVCNKDPA
PQLLSVTDKDGPEFGPPYSVSLQGMSKTSWTARMNDSRTGIILNLATELPSGEYSVILRV
GDKHGLEQDSIITAKVCDCRGAEPTCLGRTVGGSNLPLILGILGAILLLALLLLVLLFAK
QRXKEEPLLLDDGVRDNVYYYDEEGGGEDDQPED
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcttccctctctcttgacgtgcatcacgaccccggcgtcccgctgtctccca
ggaaaggttcttcagcttttcccgtgttgcatccgtggatcgggtctgttctcccgcgaa
gctcagaaccttccttttcttcaaatcctccgtggcctccgctgcgctgtcataagttac
ggtcccgtcactgaggaagacacggagtttagctggtgcgggggtctggaagcgaattcc
tttttctttaaggactttcctgatgggggccctccaaatttagtgactgctgaggagcca
gcatgtgtacctggatttcagtcagatcatctcactttcagtgtgacgagaaactacctg
acacgaggcacggtactgggcaaagtgggcttcactgactgcacagatcgcacaagattt
ctgttcgacacctctgacaaacgttttgtagtaaagaccgatggtgtactgatggtaaag
agaccagtttttcttcatgaaggacaccatgacttcttcatccactcctgggactcacaa
ggccgcaaactgaccattcctgtcagtgtgagcatgaatgcagctgatgctcaggtgcct
gttctgcagtttcccgagcctggtgaaggactgaggaggaggaagagagaatgggttatt
cctccattaagttttcctgagaatcggagaggaacctatcccttaaaagtattccgccgt
ccttgccaggaatcaaggcaagtacggtattacagcatcactggtcctggagctgatctg
cctcctattggtcgtttcaccatggacagacatactggctgtctgtatgtaacacagcca
ctcgacagagaggaaacagctcattacacgtttgaagtacatactgtgagtgatggagtg
ggacaagctgaggatcccatggagattatagtcaatgtgatcgaccagaacgacaacaaa
ccttattttacaggggagtacaacgcaaatgttgctgaggccacggccatcgggactgag
gtggttagggttgaggccaaagatgatgatgagccagataatctcaactcagatctccgc
tatcatattctgaaccaggacccaccgctgcccactgacaacatgtttgaaatcaaccca
gttactggaagcatcagagtcactggtagaggattagacagagagaaatatccacagtac
actctgacagtacaagcagcagatatggcgggagaagggttaactggacaaacaaaagtc
atcctcacggtgacggacagcaatgacaacgctccagtcttcactcagagcttatatact
gcaatagttgatgaaaacaaaaaggatgttgaggtggttaggatgatagtaacagatgag
gatgaaccacaaactccagcctggaacgccaagttcaagatcgtcagtggtgatcctgat
ggacttttcacagtaaaaacaggaactaacaaacaggaaggaatcctttctactgcaaag
gagctggactttgagagggccagcaagctcactctgttggtttcagtggagaatgagatt
ccttttgctggtgtttctgtggtgaatgtgaaggatgtgaatgaagctccaatatttgat
ccaaaggagaagcttgtggtaaaaccagaggaccttgctgtggatgaagtcgtggtgcag
tacactgcttcagacccagacactgcacgcaagcagacagtctcgtacaaaatattgact
gaccctgcaggctggctgaacgtggacaaggacacaggccttattaaagtgagaagactc
atggacagagaggctaccttcgtcacaaacaacagatacactgcaaccattggtgcatat
gataatgatgctgtcccagctacaggaactggtaccctgatcattcagctggaagatgtc
aatgacaatgctcctgtcgttgagctgcgtgacattcaggtgtgcaacaaggatccagct
cctcagctgctgtcagtaacagataaagatggaccagaatttggacctccctactcagtg
tctttacagggcatgtcaaagaccagctggaccgctaggatgaatgactccagaacaggc
atcatcttgaatttggccactgagctgcccagtggagagtacagtgttatactgagagtg
ggagacaaacatggcttggagcaggacagcatcatcacagctaaagtgtgtgactgtagg
ggcgcagaaccgacatgcttaggccgtactgtaggtggcagcaacctgccccttatcctc
ggaatacttggagccatcctgctgctcgcgctgttgttgctagtgctgctgtttgcaaaa
cagaggnnaaaagaggagccactcctgctggatgatggtgtcagagacaacgtctattac
tatgatgaagaaggaggcggcgaggacgatcagcctgaagactaa
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