Oreochromis niloticus (Nile tilapia): 100696604
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Entry
100696604 CDS
T06104
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100696604
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100696604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
EC042_2821
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
100696604
NCBI-ProteinID:
XP_003442433
Ensembl:
ENSONIG00000006172
LinkDB
All DBs
Position
LG1:19464004..19474145
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AA seq
635 aa
AA seq
DB search
MPSATAGNSAVQSAIPDLGNGSHSEAMKQIIGVIDKKVRNMEKKKSKLDDYQARKNKGER
LNQDQLEALAKYQEINNNLEFARELQKSFLALGQEIQKAVKKSARREQLQREESEQRRLK
SVLELQYLLDQLGEDSVRQDLKHPDASGAPLLTDAELSSLDEFYKLVGPERNYDVRLTDQ
YEEASLHLWELLEGRDKAVAGTTYKSLKETLDKVLQSGYFDRAQTHQNGTCEEEEEQEEQ
TVVAESKAVEQPSEPGLASEKNTEPVKVETIEFVNRQFIPETTYSSTDKDQVEEWSVEAQ
MVNSLQHQPPAQLAPEQTITVNQVTPTPATDPVVRKQAVQDLMAQMQGTYNFMQDSMLEF
DGQALDPAIVSAQPMKPVQAVDLQQMGGPLLHSESRLPQTAAVSGPQESSQASMSLSSEP
SPAPCSLSSAFPPVSKPTLTGGINVNAAPFQSVQAVFNMNAPVPPTTDGQVDPLKQPSQF
PGGYGQGFSSQPENTVDQPDIPQERLQTVVNAFQPQDQIMSSTAGHEDPSVGAGFGQSGQ
SFYSSRAVPRGGPRNARGVMNGYRGSSNGFRGGYDGYRPPFSNAPSSGYGQAQFNTSRDY
SSSSYQREGYQQGYKRGAAQGSRGLSRGNAQAMRS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcaacagctggcaacagtgctgtccagtctgccattccagacctgggaaat
ggaagtcattctgaggccatgaagcagattattggtgtgattgacaagaaggtccgcaat
atggaaaagaaaaagtccaaactggatgactaccaggcaagaaagaataagggcgagaga
ctaaatcaggatcagttggaggccttggcgaagtatcaagagatcaacaacaacttagag
tttgctcgagaactgcaaaagagctttctcgcattgggtcaggagattcaaaaggcagtc
aagaagtctgcaagacgggaacagctgcagcgagaagagagtgaacaaagacgcttgaag
agtgttttggagcttcagtatttactcgaccagctgggagaagacagtgtcaggcaggac
cttaaacaccccgatgcctctggtgcacctttgctcactgatgctgaactctcatccctc
gatgagttttacaaattggtaggacctgagaggaactacgatgtaaggttgactgaccaa
tatgaagaagcctcactacacctgtgggaactgcttgagggtcgagacaaggctgtagca
gggaccacgtacaagtcactgaaggaaaccctggacaaagtgctgcagagtggttacttt
gacagagcgcaaactcatcaaaatgggacgtgcgaggaggaagaagagcaagaggaacag
accgtggtggctgagtctaaagctgtggagcagccatcggaacctggattggctagtgaa
aaaaatacagagcccgttaaagtggaaactatagagtttgtaaacagacagttcattcca
gaaactacatacagcagtacagacaaagaccaagttgaggagtggagtgtggaggcccag
atggtgaattcactccagcatcagccccctgctcagctggctccagaacaaaccattact
gtgaaccaagtcactcccactcctgctactgatcccgtggttagaaagcaggcagtgcaa
gacctcatggcccagatgcaagggacatacaacttcatgcaggactccatgttggagttt
gatggccaggcgctggatccagccattgtgtctgcgcagccaatgaagcctgtgcaagct
gttgacctgcagcagatgggcggtcctctactccactcggagtccagacttcctcagaca
gctgcagtgtctggaccacaggaatcctcacaagcctcaatgtctctgtcatctgaaccg
tctcctgccccatgttctctgtcctctgccttccctcctgtctccaaacccaccctcact
ggaggcatcaatgtcaacgcagcacctttccagtcagtgcaagcggtatttaacatgaat
gcacctgtacctccaactaccgatggccaagtagaccccttgaagcagcctagccagttc
cctggtggctatggacagggctttagcagccagccagaaaatacggtcgaccagcctgac
atcccacaagaaagattacagacagttgttaatgcattccagccccaggaccagattatg
tcctcaactgcaggacatgaagatccctctgtaggggcagggtttgggcagtctggtcag
tccttctacagcagcagagctgtaccaagaggtggacccaggaacgctcgtggcgtgatg
aatggatatcggggctcctcgaatggatttagaggtggatatgacggctatcgtccaccc
ttctccaacgctcccagcagtggatacggtcaagctcagttcaacacatctcgggactat
tccagcagttcctatcagcgggagggatatcagcaaggctacaaacgtggagcagcccaa
ggatctcgtggtttgtcccgaggtaatgcgcaggcaatgcgatcctaa
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