Oreochromis niloticus (Nile tilapia): 100696752
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Entry
100696752 CDS
T06104
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100696752 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100696752 (hspd1)
03110 Chaperones and folding catalysts [BR:
onl03110
]
100696752 (hspd1)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100696752 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100696752 (hspd1)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100696752 (hspd1)
Messenger RNA biogenesis [BR:
onl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100696752 (hspd1)
Chaperones and folding catalysts [BR:
onl03110
]
Heat shock proteins
HSP60 / Chaperonin
100696752 (hspd1)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100696752 (hspd1)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100696752 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
100696752 (hspd1)
Exosomal proteins of breast cancer cells
100696752 (hspd1)
Exosomal proteins of colorectal cancer cells
100696752 (hspd1)
Exosomal proteins of bladder cancer cells
100696752 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100696752
NCBI-ProteinID:
XP_003456322
Ensembl:
ENSONIG00000013762
UniProt:
I3K867
LinkDB
All DBs
Position
LG16:complement(32331559..32338465)
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AA seq
575 aa
AA seq
DB search
MFRLATVMRQVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVETIINELKNLSKPVTTPEEIAQVATISANGDM
EIGNIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGKVGEVQITKDDTLLLRG
GGSSAEIEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAMLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGSPEMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTELPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttagccacagtcatgaggcaggtgaggcctgtgagccgggcgctggctccc
cacctcacacgagcctacgccaaggatgtgaagtttggggctgacgctcgtgccctcatg
ctgcagggagtggacctgctggctgacgccgtggctgtcaccatgggcccaaagggtcgc
actgtcatcatcgagcagagctggggcagtccaaaggtcaccaaggatggcgtgacggtg
gcaaagagcattgatctgaaggacaagtacaagaacattggtgccaagctggtgcaggat
gtggccaacaacaccaacgaggaggccggcgacggcacgaccaccgccactgtactggct
cgcgccatcgccaaggaaggtttcgacaacatcagcaaaggtgcgaatcccgtggagatt
cgccgaggtgtcatgatggctgtggaaaccatcatcaacgagctgaagaacctttcaaag
cccgtcacaacccccgaggagatcgcacaggttgctacaatctcagccaatggagatatg
gagattggcaacatcatttctaatgccatgaagaaagttggccgcaagggagtcatcacc
gttaaggatgggaagactctgcatgatgagctggagatcattgagggtatgaagtttgac
cgtggttacatctcaccttacttcatcaacactgccaaaggccagaagtgcgagttccag
gatgcctacctgctgctgagtgagaagaagatctccagtgtccagagcattgtgccagct
ctggaaattgccaaccagcaccgtaaacctctggttattgtggcagaggacgtggatgga
gaagctttgagcaccttggttctcaacaggctgaaggttgggcttcaggtggtagcagtt
aaagccccaggctttggcgacaacaggaagaaccagctgaaggatatggccatcgccacc
ggggggactgtgtttggggatgaggctctgggcctggctcttgaggacatccaggctcat
gacttcggcaaggtcggcgaggtgcagatcactaaagacgacaccctgctgctgagggga
ggaggcagctctgctgagattgagaaacgcgcagcagagatcgcagagcagctggagaat
accaccagtgactacgagaaggagaagctcaatgagaggctggcaaagctttcggatgga
gtcgccatgctcaaggtgggaggaacaagtgatgtggaggtgaatgagaagaaggaccgc
gtgacagacgctctgaatgccaccagggcagctgttgaggagggcattgttcctggagga
ggttgtgccctgctgcgctgcatccccgccctcgacgccctcaaacctgccaactctgac
cagaagatcggtgtggacatcatcagacgggcgctccgtattcctgccatgaccatcgcc
aaaaacgcaggtgtggagggttcactcgtagtggaaaagatcctgcagggatcccctgaa
atgggctacgacgccatgcagggagagtacgtcaacatggtggagaagggcatcatcgac
cccacaaaggtggtgaggacagcactgatggatgctgcaggagtagcatctctgctctcc
actgctgaggctgtcgtcacagagctccccaaggaggagaaggaaatgccgggtggcatg
gggggcatggggggcatgggcggtatggggggtggaatgggtttctga
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