Oreochromis niloticus (Nile tilapia): 100696971
Help
Entry
100696971 CDS
T06104
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100696971
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100696971
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100696971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100696971
NCBI-ProteinID:
XP_003443250
Ensembl:
ENSONIG00000008402
UniProt:
A0A669DU61
LinkDB
All DBs
Position
LG4:9885252..9892613
Genome browser
AA seq
627 aa
AA seq
DB search
MRGSYGDRDRDRGRDRGNPRFGSSRGGPPPGKKFRNPGERLRKKRWDLNELPKFEKNFYN
ENSEVQRMSQYDVEEYRRKKEITVRGSGCPKPVTSFHHAQFPQYVMDVLVQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCVESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDSGRG
GGGGRSRFRNSNSNNPNMMYQDECDRRMRSAGGSGSSKDGRGSSSSYSRSGNNRDGDQSS
SYRDRSSRDGGRSYGSGSGSYDQYQNNSSSRGGSSSAGNAVGQAPPPSSGPQPLMAQQFN
PPQPMMGLMGHSPFQFAPPPASLSGRK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcttacggagacagagaccgagaccgtggtcgtgacagaggcaatccccga
ttcggatcaagcagaggcggaccacccccgggtaagaagtttcggaatcccggggaacgc
ttacgaaagaagagatgggacctgaatgagcttcccaaatttgagaaaaacttctataat
gaaaattccgaagtgcagcgaatgagccagtatgatgttgaggagtatcgcagaaagaaa
gaaatcacagtccgaggctcaggctgcccaaaacctgtcaccagcttccatcatgcacag
tttcctcaatatgtaatggatgtactggtgcagcaaaacttcaaggaaccaacagccatt
caggctcaaggtttccctttggcactcagtgggagagacatggtgggcattgctcagacg
ggctctggaaagactttatcgtatctcctgcctgcaattgtgcacatcaatcatcagccc
tacttggagcgtggagatggacccatttgcttggtgttggcccccacaagagaactagct
cagcaggtccagcaggtggcatatgactatggaaagtcatcacgcatcaaaagcacttgt
gtgtacggcggtgctcccaagggacctcaaatacgagacttggagagaggtgttgaaatc
tgcatcgccactccgggtcgtctcattgacttcctggaagctggaaagaccaacctgcgg
cgctgcacatacctagttctggatgaggctgaccgcatgctggacatgggtttcgaacca
cagatacgcaaaattgtggatcagatcaggccggacagacagactctgatgtggagcgct
acctggcctaaagaagttcgccaactggcagaggacttcctgaaggactatgtccagatc
aatgttggagctctggagctcagcgctaaccacaacatccttcaaattgttgatgtttgc
gtggagagcgaaaaggaccaaaagcttatccagctgatggaagagattatggctgagaag
gaaaacaagaccatcatcttcgttgagaccaagaaacggtgtgatgacctgacacgtagg
atgagacgtgacgggtggccagcgatgtgtattcatggtgacaagagtcagccagagaga
gactgggtattagcagagtttcggagtggcaaagcccccatcctcattgctactgacgtc
gcctcacgtgggcttgatgtggaggatgtcaagtttgtcatcaactatgactaccctaac
tcatccgaggattatatccaccgcatcggccgtacagctcgcagcactaacaaaggcacc
gcttacacctttttcactccggggaacctccggcaggcccgagagctgatccgggtcctg
gaggaagcgcggcaggcaatcaatcccaaactgctgcagctggttgacagtggacgcggc
ggaggaggtggccgttcccgtttccgcaactccaattcaaacaatcccaacatgatgtac
caggatgagtgtgatcgccggatgcgttctgctggtgggagtggcagctcaaaggatggc
cgtggcagcagcagcagctacagccgcagcggaaacaaccgggatggggaccaatcctct
tcttacagagatcgcagcagcagggatggaggacgcagttacggctccggctctggctcc
tacgaccagtaccagaataacagcagctccaggggtggctccagctcagcaggcaacgct
gtggggcaggccccacctccttcatcaggccctcagcctctaatggcccagcagttcaac
cctccgcagcctatgatgggtttgatggggcactcgccattccagtttgcgcctcctcca
gcatctctgtctgggagaaaatga
DBGET
integrated database retrieval system
