Oreochromis niloticus (Nile tilapia): 100696973
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Entry
100696973 CDS
T06104
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X4
KO
K20493
leucine-rich repeat-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100696973 (carmil1)
Membrane trafficking [BR:
onl04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100696973 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
100696973
NCBI-ProteinID:
XP_013125919
LinkDB
All DBs
Position
LG11:complement(8209634..8285479)
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AA seq
1399 aa
AA seq
DB search
MSEEVSEVPKELLESVRDAVGRKVKLSLRKRVKLEIKGDKMENRVLALASYRAYLLTARI
PTKVEHSFNYLEIQGIACNKPMQLSIEYERGSFSLKLPSTDEVNEVVAHIGNCMQRICPG
LPPSKVMKKLFMEPPDRLSSLQTLWENNKPAEPGPCGGFSQMYRCVCDWLGMPYREEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKVSTKDYKLSADVCEQILR
VVSRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGVSSLGAQF
AKLRLGLKHLNFSKTSLSPKGVNSLCQSLSASPSIPSSLVHLDLSGNMLRGDDMQHFYHF
LGQPNSLATLDLSNTDCLLDQVCSALLRGSVEHLSVLNVSKSVFPHRKGKDVPPSFKHFF
SSAASLTSINVSGTKLPPEAVKALLLGLASNPSVKDVSLDLSCCELRSGGSQILEGCIAE
IPNISSLDISDNGLDSELSTLLVWLAKNRSIRHLSLGKNFNNIKSKNLAPVLDSLVHLIQ
EEESPLTSLSLADSRLKSDLTIVLNALGSNSTLTRLDISGNAMGDMGAKMLAKALQINSK
LRTVIWDKNNTSPQGLQDVAAALEKNFTIRFMPLPIIDASQALKASPEKTEDALLKIETY
LYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLRNSETDAIVEDVRSA
ESLIKDARNSKTLLPNLYHLGSASREEVNSSSVGPIQEKLESMAGEVTAVMDQQLQTLLE
SMVDAAESLCPHVMKRSNLRVELMKASSARMVVPKSFVSKTLLEQSGVDIINKISEVKLS
LASFLSDRIVDEILEALSTSQHVLADHLVRRGRPLVQQESVDLDVPEEKIPKRASAEILE
AERLEDLETCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHVEDTSTSSHTP
STPSMVLSKLEPCPTGVMVELPSEEEKKLQHFTKLRPRRNKKTHSSKVPQISSTPSQDGE
QNGLMGRVDEGVDEFFSKKVTKMDSKRSLKSSESQDGEKKKKGGFLNLIKRSSKSDKSDK
SDKLDKSEKIQATLTSSGPSPSAQASVIPEEPSSPKVAVKSTAPEPKSRDASSRSQPTDY
SSSSDRSEELRTPDSMDEPWEGSDGRGSPQGGKRYPGVQMMGSGLLAEMKAKHERRAYKS
SSPDRPDSNTTAKPQPTTPESRSPGGSVNKPDPASPEKTSPRGETKPEPAPRLRATSSSS
SPGGPVSPKPPVPQGAKPALAARPTIPQKPRPTNSSRSIDESSDSTSSGSVSHKATVLPP
TLKRVLSEKGKEGVSTNKTTQEVRSMLDSVQRSSPLSTNSEDHGSSKTKDQSANSDKDKA
AGKKSSDSGEEADKDFILI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaagtgtcggaggtcccaaaagagcttctggagagcgtgagggatgcggtg
ggaaggaaagtgaagctgtcactgcggaagagagtcaaactggagataaaaggagacaag
atggagaacagagtattggctctcgcatcttaccgagcctacctcttgacagcacgcatt
cctaccaaggtggaacactcctttaattatctggagatccagggaattgcttgcaacaag
ccaatgcagctgtccatagaatatgagcgcggctcattttcgttgaagctgccctccaca
gatgaggtaaacgaggtggtggctcacataggaaactgtatgcagaggatatgtccaggt
ctgccccctagtaaagtgatgaagaagcttttcatggagcctccagacaggctctcttct
ctgcagactctgtgggagaacaataaacctgctgaacctggaccctgtggtgggttttct
cagatgtaccgatgtgtttgtgactggttggggatgccttacagagaagaggtgcagtgg
gatgtagacactatatatttaacgcaagacaccagagaacttaatttgcaggacttcagt
catctggagaacagggatctggtagctataatagcagtcctggagtttaaccagtggttc
accaaggtctctactaaggattacaagctgtctgcagatgtttgtgagcagatccttcgg
gtggtgtctcgatccagtcgactggaggagttggtcctggacaatgcaggactcaaaacc
gattttgcccagaagctagctgctgctctggcccacaaccccagctcaggactcaccact
attaatcttgccaacaacccactggaggacagaggtgtttcctccctgggtgctcagttt
gccaaactccgtttggggctcaagcatttaaacttttccaaaacctcactctcacccaaa
ggggtgaatagcctttgccagtcactgagtgccagcccgtccatccccagcagcctagtc
catctggacctctcagggaacatgctccgaggagacgacatgcagcacttctaccacttc
ctcggtcagcccaacagcctggcaacccttgacctctccaacactgattgcttattggac
caggtttgctcagcactgctgcgtggctcagttgaacacctctctgttctcaacgtatca
aagagcgtcttccctcacaggaaaggcaaagacgtgcccccgtccttcaagcatttcttt
agcagtgccgcatctctcacctccatcaacgtgtcaggaaccaagctgccaccagaggct
gtgaaagcgctcctacttggtctggccagtaacccaagtgtgaaggatgtctctctagac
ctcagctgctgtgagctgcggtctggaggatctcagatccttgaaggttgtattgctgag
atcccaaacatctccagcctggatatctctgacaacggattagactcagagttgtccact
ctgcttgtttggttggccaagaaccggtctatcagacacctctctctgggcaagaacttc
aacaacatcaaatccaaaaatctcgctccagtgttggacagcttggttcacctgattcag
gaggaggagtcgcccctcacctctctgtctctagcagactccaggctcaagagtgacctc
accatcgttctcaatgctttgggcagcaactccacgctcacaaggcttgacatcagtggg
aatgcaatgggtgacatgggggccaaaatgctggcaaaggcgttacagatcaactccaaa
ctcaggactgtgatctgggataagaacaacaccagccctcagggtctgcaggatgtagca
gccgctctggaaaagaacttcaccattcgtttcatgcccctccccatcatcgatgcctcc
caggctctaaaggcgagccctgagaaaactgaggatgccttactaaagattgaaacgtat
ttgtacaggaaccacgaaacaagaaaatatcttcaggaacaggcttatcggcttcagcag
ggcatcgtaaccacaaccacacagcagatgattgacaggatttgtgttaaagtccaggac
cacctcaactctctgaggaactctgagacggacgccatcgtggaggatgtcaggtcagcg
gagagcctcatcaaagatgccaggaattcaaaaacgctgcttcccaacctctaccacctc
ggatcagcttccagagaggaggtgaacagttcttcagtaggcccaattcaggagaaactg
gagtctatggccggggaggtgactgctgtcatggaccaacagctgcagacgctgttggag
tccatggtggatgcagcagagtcactgtgtcctcatgtgatgaagaggagtaatcttcga
gtagagctgatgaaggccagctcagctaggatggttgtacctaaaagctttgttagcaaa
acccttctggagcagtccggggtggatatcatcaacaagatcagtgaggtgaagctgagt
ctagcgtcctttctgtccgatcgcatcgtcgatgagattttggaggctctttccacgtca
cagcacgtgctggcggatcatctggtacgtcgaggtcgccccttggtgcagcaggagtcg
gtggacctggatgtgccggaggaaaagattccaaaacgggcatcggccgagatactagag
gctgagaggcttgaggatttggaaacatgtatgatgactccgaaatccaaaaggaagagt
atccacagcaggatgctgcgaccagtgtctcgtgcctttgagatggagtttgacctggac
aaagccctagaagatgtcccgatccatgtggaggacacttcaacttcatctcacactcca
tctactccatctatggtgctgtccaaactggagccatgtcccacaggtgtgatggtggag
cttccatctgaggaagaaaaaaagctccagcacttcaccaaactccgacctcggagaaac
aaaaagacacattccagcaaagtaccacaaatcagcagcactccatctcaagatggggaa
cagaacggcctcatgggaagggtggacgagggtgtagatgagttcttctctaaaaaagtc
accaagatggattccaagcgttccctgaagagttcagaatctcaagatggcgagaagaaa
aagaaaggaggatttctaaatctcatcaaacgatcctctaaatcggataaatcggataaa
tcagacaaactggataagtctgagaaaatccaggccactttaacatcctcaggtccatca
ccctctgcacaggcatccgtcatcccagaggagccttcctcaccgaaggttgcagttaag
agcacggcacctgagccgaagtcgagagacgcctccagtcgctcacagcccacagactac
agcagcagctcagaccgctcagaggagctgaggacaccagactccatggacgaaccctgg
gagggttcagatggcagggggagtcctcagggaggcaagcggtatcctggtgtgcagatg
atgggcagcggcctcctagcagagatgaaagccaagcacgaaagaagagcatacaagtct
tccagccctgacagacctgacagcaatacaacagccaagcctcaacccaccactccagaa
agcaggtctcccggtggttccgttaacaagcccgaccctgcttctccagagaagacctca
ccacgcggtgagactaagcccgagccagctcctcgtctcagagctacgtcttcctcgagt
tccccggggggaccagtaagtcccaaaccaccggtgccacagggagcaaagcctgctctg
gctgctcgacccacaatcccgcagaagccgaggcccacgaatagcagcaggagcatagat
gagagctcagattccaccagcagtggcagtgtgtctcataaagccacagttcttcctcca
acactgaaaagggtgctatcggaaaaaggcaaggagggagtctccaccaacaaaaccact
caggaagtgagatctatgttggactctgttcagcgatccagccctctcagcaccaactct
gaagatcacggctcctccaagaccaaggaccaaagtgcaaactcagacaaggacaaagca
gcaggcaagaagtcctcagactctggggaggaggcagacaaagactttattttgatataa
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