Oreochromis niloticus (Nile tilapia): 100697102
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Entry
100697102 CDS
T06104
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100697102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100697102
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100697102
Intermediate filaments
Intermediate filament-binding proteins
100697102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100697102
NCBI-ProteinID:
XP_005461317
Ensembl:
ENSONIG00000006862
UniProt:
I3JIG5
LinkDB
All DBs
Position
LG6:41861923..41890121
Genome browser
AA seq
2346 aa
AA seq
DB search
MTTVAAEYDRMELQQQYSGSNDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEHHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLAGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEVERYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVTTNANKHSASN
SGYKPCDPQVIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSLEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVKAGHFGATKIQER
ISDLQAQWAALEQLAAVRKKRLEEALALHQFQADADDVDAWMLDALRIVSSGETGHDEFS
TQALARKHKDAAAEVASYRPVIDSLHEQVACLPKEEAESEEVRGRLTGIEERYKEVADLT
KLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHSGHPSEKDIKIQQDKLNNRWSLFRELVDRKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLSEMHGE
AQRLAEEHPDQANAITCRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQDQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINADRIHEKVTSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMLLVSEKPETEAVVKEKLSALHTMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRHRRNFLVESREVHQFNRDIEDEI
LWVQERMPVAMSTDHGHNLQTVQLLIKKNQTLQKEILGHQPRIDDILERSQSLLKEESSN
GNAIRRRLADLQQLWKQLMEEVERRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAEAVHQLSKTSRGLVANGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHSDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILARIVDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAGRLQSAYAGDKADDIQRRESEVLEVWRSLLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLDVRRQQEEEERRRK
PPSPEPVEVQQEEAQQSAVNQNGPPSDQDSPRDGVEDGELVNGVAERSSKEPSPAPSPTS
GRKVKSQSTTLPTTNRDSCSPQEGPLHRKHEWEGHNKKASNRSWHNVYCIINNKEMGFYK
DGKAASQGVPYHNELPISLKDATCDVASDYKKKKHVFKLRIADGNEYLFQAKDEEEMSTW
IQAILNAGAADRSDIQGSSPGTPASGRAHTLPATVTLTTESSPGKREKDKDKDKEKRFSL
FSKKKQ
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggccgccgagtacgaccgcatggagctgcagcagcagtacagcggcagc
aacgacacggtgaacaaccgctgggacgacgactgggacaacgagaacagctcggcccgc
ctcttcgaacgctcccgcatcaaagcgctcgcagatgagcgggaggcggtgcagaagaag
accttcactaagtgggtgaactctcacctgtccagagtctcctgcaggatcaccgacctg
tacatggacctgagagacggacgcatgctcatcaaactgcttgaagtcctctccggggag
agactgccaaagccaaccaaagggcggatgcggatccactgtctggagaacgtggacaag
gcgctgcagttcctgaaggagcagcgggttcacctggagaacatgggctcccacgacatc
gtggacggaaaccaccgattgacgctgggcctcatctggaccatcatactccgcttccag
attcaggacatcagcgtggagacggaagacaacaaagagaagcgatcggccaaagacgcc
ctgctgctgtggtgtcagatgaagaccgcgggatatcccaacgtcaacatccacaacttc
agcaccagctggagggacggcatggccttcaacgccctcatccacaaacacaggcctgat
ttgatcgattttgacaaactgaagaaatccaacgctcactacaacctgcagaacgccttc
aacctggcggagcatcacctggggctcaccaagctgttggaccccgaggacatcagcgtg
gaccatcccgacgagaagtccgtcatcacctacgtggtgacctattaccactatttctcc
aagatgaaggctctgaaggtggagggcaaacgtatcgggaaggttttggacaacgccata
gagacggagaagatgatcgaaaaatacgagtctctggcctcagacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctggcgggagtccag
cagcagctgcaagccttcaacacctaccgcacggtggaaaaaccccccaagttcacggag
aaggggaacctggaggtccttctcttcaccatccagagcaagatgagagcaaacaaccag
aaggtgtacatgccccgtgaggggaagctcatctctgacatcaacaaggcctgggagcgg
ctggagaaggcggagcacgagcgcgagctggctctcaggatggagctgattcgtcaggag
aagctggaacagttggccaggcgctttgatcgaaaggcggccatgagagagacctggctc
agcgaaaatcagaggctggtgtcacaggataactttggcttcgaccttcaggccgtcgag
gccgccaccaagaagcacgaggcgatcgaaacggacatcgctgcgtacgaggagcgtgtc
caagctgtggttgctgtggcgaaggagcttgaggtggagcgctaccatgacatcaaacgc
atcacagcccggaaggacaacgttattcgtctgtgggaatatctgctggagctgctgaag
gcccgcaggcagcggctggagatgaacctgggcctgcagagggtctttcaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaggattatgggaag
catctgctgggggtggaggacctgctccagaaacacgccttggtggaggcagacattgcc
atccaggccgacagggtgaaggcggtcaccaccaacgccaacaagcactctgccagcaac
agcggctacaagccctgtgaccctcaggtcatccaggaccgggtggcccaccttgagttc
tgctaccaggagctgactcagctcgccgcagagcgacgtgcccgtctggaggagtctcgc
cgtctctggaagtttttctgggagatggcggaggaggaaggctggatccgtgagaaggag
cagatcctgtcctctttggagcacggtaaggacctgacgggggcgctgcgtctcctcagc
cagcaacgtgccctggaggacgagatgagcggccgtgccggccacctgcagcacaccatt
gcggagggccaggccatggtgaaggcgggacacttcggtgccacgaagatacaagagcga
atttccgacctgcaggctcagtgggcagcgctggagcagctggcagcggtgaggaagaaa
aggctggaggaggctctggccctccaccagttccaggctgatgctgatgacgtagatgcc
tggatgctggacgccctgcgcatcgtctccagcggggaaaccggccacgatgagttctcc
acccaggcgttggccaggaagcacaaagatgcagcggcagaggtggcaagctacagaccg
gtaattgactcactccacgagcaggttgcctgtctgccaaaagaggaggcggagtcagag
gaggtccgtggtcggctgaccggtatcgaggagcgctacaaggaggtcgccgacctcacc
aagctaaggaagcaggcgcttcaggacgctttggccctctacaaaatgttcagcgaggcc
gatgcctgtgaagtttggatcgatgagaaggagcagtggctgaacagcatggagatcccg
gaaaaactggaggacctggaggtcatacagcacaggtttgagagtcttgagccggagatg
aacaaccaggcgtctcgtgtcgctgtggtgaaccagatcgccaggcagctgatgcacagt
ggtcacccgagtgagaaggacattaagatccagcaggacaaactcaataacaggtggagc
ctgtttcgtgagcttgtggaccggaagaaggagtccctgaactcagctctgggtgtgcag
aactaccacctcgactgcaacgagaccaagtcctggatcaaagagaagaccaaagtcatt
gagtctacccaggagctgggcaatgacctcacaggggtcatggccctgcagcgcaaactg
accggcatggagcgtgacctggccgccatcgaggacaagctaagtgaaatgcacggcgaa
gcccagaggctggcagaagagcaccccgatcaggccaacgccattacgtgccgtctggcc
gagatcacggccgtgtgggaggaaatgaagaacacgctaaagaaccgagaggagtctctg
ggtgaagccagaaaactgcagcagttcttacgtgagctggacgacttccagtcgtggtta
tctcgcactcagaccgccatcgcctcagaggacatgcccaacacgcttgccgaagcggag
aagttgatggcccaacatgaaggcatcaagaatgagatccaaaactacgaggaggactat
cagaagatgcgggacatgggcgagatggtgacacaggaccagacggacgctcagtacatg
ttcctgcgacaacggctgcaggcgctcgacaccggctggaacgaactgcacaagatgtgg
gagaatcggcagaacctgctgtcgcagtcccacgcctaccagctgttccttcgggacacc
aagcaggccgaggctttcctcaacaatcaggagtacgtcctggctcacaccgagatgccc
acgaccctggagggggccgaggctgccatcaagaagcaagaggacttcatgaccacgatg
gacgccaacgaggacaagattaacggcgtggttgaggccggtaggcggttggccagcgac
gggaacatcaacgccgatcgaatccatgagaaagtcacctccatcgacgacaggcacaag
aagaacagggaggctgcggtggagctgctgatgaggttgaaggacaaccgagacctgcag
aaattcctgcaagactgccaggagctgtctctgtggatcaatgagaagatgctcacggct
caggacatgagctacgacgaggccagaaacctgcacagcaagtggctgaagcatcaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatcgagaaggatggcatg
ctcctggtgtcggagaagccggaaactgaagcggtggtgaaggagaagctgtcggcgctc
cacaccatgtgggaggagctcgagtccaccacgcagaccaaagctcagtgtctgttcgat
gccaacaaggccgagctgttcactcagagctgcgccgacctcgacaagtggttggccggc
ctcgagggccagatccagtccgacgactacggcaaagacctgacgtccgtcaacatcctg
ctgaaaaagcagcagatgctggagaaccaggtggaggtgcgacagagagaggtggtggag
ctgcagagccaggtgaaggctctggggcaggaggtgaaggacacggacgaggtggacggg
cggaggcaggtggtggaaaagaagtttcaggagctgctggagccgctgcgacatcgcagg
aacttcctggttgagtccagagaggttcaccagttcaaccgggacatcgaggacgagatc
ctgtgggttcaggagaggatgcctgtggccatgtccaccgaccacggccacaacctgcag
acggtccagcttctcatcaagaagaaccagacactgcagaaggagatcctgggccatcag
ccccgcatcgatgacatcctggagcgcagccagagcctcctgaaggaggagtcctccaac
gggaatgcgatccgccggcgcctggccgatctgcagcagctgtggaagcagctgatggag
gaggtggagcgtcggcacggccggctggaggaggcacacaaagcccagcagtactatttt
gacgccgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaggag
aaggccaaggacgagcagagcgccgtcaccatgctgaagaaacatcagatcatggagcag
gcggtggaggactacgccgaggctgtccaccagctgtccaagaccagcagagggctggtg
gccaacggacacccggagagcgagcggatcagcatgcgtcagtctcaggtggataagctc
tatgccggcttgaaggacctgtcggaggagaggcggggcaaactggacgagaggctccgc
ctcttccagctgaatcgagaggtagacgaccttgagcagtggatcgccgagcgtgaggtg
gtggccgggtcacacgagctaggacaggactacgagcatgtcaccatgctgcaggaacgt
ttccgggagtttgcccgggacaccgggaacatcggacaggagcgcgtggacgccgtgaac
cggctggcggacgagctgatcaacgctgggcacagtgatgcggccacggtggcggagtgg
aaggacgggctaaacgaggcctgggccgacctgctggagctcattgacaccaggacgcag
atccttgccgcctccttcgagctccacaagttctaccacgacgccaaggaaatcctggca
cgcatcgtggacaagcagaagaagcttccggaggaggtgggccgggaccagaacacggtg
gagacgctgcagaggatgcacaccacctttgaacatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgcggggcgcctgcagtcggcgtacgccggagacaaagca
gacgacatccagcgcagggaaagcgaggtgctggaggtgtggcggagtcttctggaggcg
tgtgacggacgccggctccgcctccttgacaccggggacaagtttcggttcttcagcatg
gtccgagacctgatgctgtggatggatgacgtcatccgactcattgaggcccaggagaac
cccagagacgtttcgtcggtggagctgttgatgaacaaccaccagggcatcaaggcggag
atcgacgcccgcaacgacagcttcacggcctgcatcgagctcgggaaggctttgctggcc
aggaagcactacgcttcagaggagattaaagagaagctgctgcagctcaccgacaagagg
aaggagatgattgacaagtgggaggaccgatgggagtggctgcgactgatccttgaggtc
caccagttctctcgggacgctggcgtggccgaggcctggctgctgggtcaggagccctac
ctgtccagcagggagctgggccagagcgtggatgaggtcgagaagctcatcaaacgccac
gaggccttcgagaagtccgccgccacctgggaggagcgcttctccgccctggagaggctg
actacgctggaactgctggatgtgaggaggcagcaggaggaggaggagaggaggaggaag
ccaccatctccggagcctgtggaagttcagcaggaggaggcgcagcagagcgccgtcaat
cagaacggaccgccctcggaccaggattctcccagggacggcgtggaggatggagagctg
gtgaacggtgttgccgaacggagctccaaagagccgagtcccgccccctcgcccacctct
ggcaggaaggttaaaagtcagtcgaccacgctgcccaccacgaaccgggactcctgctcg
ccccaggagggaccgctgcaccgcaaacacgagtgggagggccacaacaagaaggcttcc
aacaggtcgtggcacaacgtgtactgcatcatcaacaacaaagaaatgggtttctacaag
gacggcaaggcggcgagccagggcgtgccgtaccacaacgagctccccatcagcctgaag
gacgccacgtgtgatgtcgcctcggactacaagaagaagaaacacgtcttcaaactcaga
atcgctgatggaaacgagtacctgttccaagccaaagacgaggaggagatgagtacctgg
atccaggccatcctgaatgccggtgccgccgaccgctctgacatccagggcagcagcccc
ggcacgcccgcctccgggcgtgctcacacgctgccggccaccgtcacgctcaccaccgag
tcgagtcctggaaagcgcgagaaggacaaagacaaagacaaggagaagcgcttcagcctg
ttcagcaaaaagaagcagtag
DBGET
integrated database retrieval system
