Oreochromis niloticus (Nile tilapia): 100697111
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Entry
100697111 CDS
T06104
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X2
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100697111 (pif1)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100697111 (pif1)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100697111 (pif1)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100697111 (pif1)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
100697111 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
AAA_30
Pif1_2B_dom
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
DEAD
Mg_chelatase
AAA_7
RsgA_GTPase
ABC_tran
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
100697111
NCBI-ProteinID:
XP_003438064
Ensembl:
ENSONIG00000010534
LinkDB
All DBs
Position
LG18:complement(11049291..11059273)
Genome browser
AA seq
632 aa
AA seq
DB search
MLSGEDGAQLQCTVTVEQLNSSGQATRRQVIRKASVILGRNEFQEIVLRVHDGKVPQSYH
LKEFKLFTKFARDGKCTVKLVPENIQVLMSNCPTDQLSLFLKTLSIKHQAWQGSKALSNR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSKVAPNGLTDRTNRMTAAGTGQQVKRSRSDC
NFSPVKANPSKKPILSLPSRKLNKEQAAVLSAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEISMVEAQFFDKLEAVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARS
WHKVIQINMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLMKSAYHQIERDGILATRL
CTHKDDVDLTNENKLQQLPGSARLFEALDSDPVLVKTIDAHSPVGRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVVGFESGKHGLPRVRFLCGVTEVLKPERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARNLEGLRVMDFDPRVVRADP
DVLLFYRKLRKERLLMQASMEDFVSNNKENAW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgggagaggacggcgcacagcttcagtgcactgtgacggtggagcagctcaac
agctccggacaggcgacccggaggcaggtcatccgcaaagcctcagttattctgggccgg
aatgagtttcaggagatcgtcctgcgagtccacgacggcaaagtgccgcaaagctaccat
ctgaaagagttcaaacttttcaccaagtttgccagagatgggaagtgcaccgtgaaactg
gtccctgaaaacatccaggtcctcatgtcaaactgtccgactgaccagctcagcctcttt
ctcaaaaccctgagcatcaaacaccaggcctggcagggcagcaaggctctgagcaaccga
gagaagctcaaggctggcctgccccgcagcttcgaggccatcagccccctgcagcaaaaa
gacatccagaaagtcaatgagctgagaagtaaagtggctcctaacggactgacagaccgc
actaataggatgacagctgcaggtacaggacagcaggtcaaacgctccaggagtgactgt
aacttcagcccagtaaaggccaacccgagtaagaagcccatcctctctttaccatcacgc
aagcttaacaaagagcaggctgctgttctcagtgcagtgctgagtggcaagaatgtcttt
ttcaccggaagtgcaggtacaggaaagtccttcttgctcaagagaatcatgggatctctc
ccaccaaagagcacttttgccacagccagcacgggagtggctgcgtgtcacatcggagga
acaacgttacacagctttgctggtattggctcaggctctgccccactggagcagtgcatc
gagctggctcagaggcccggggtgcttcagcactggactagctgtcgacacctcatcatt
gatgagatttccatggtggaggctcagttctttgacaagcttgaggcggtagctaggtcg
gtgaggaggtctaccgagccatttggagggatccagctgatcgtatgtggtgactttctt
cagctgcctccagtttctaaaggaaaagaaaaagccagcttctgctttcaggccaggagt
tggcataaggtgatccagatcaatatggagttaacggaagtacggaggcaaacagaccag
agcttcatctccctcctgcaggcagtgagggtggggagggtgacagaggaagtcacagcc
aagctgatgaaaagcgcctaccatcagattgaaagggacggtattctagcgaccaggctg
tgcacacacaaagatgacgtggacctcaccaacgagaacaaactccagcagttaccaggg
tcagcgcgtctgtttgaggcactagacagcgacccagtgctggtcaagactatagacgct
cacagtcctgtcgggaggctgatccaactcaaagtgggagctcaggtcatgctgacaaag
aacttggatgttgctcgaggtctggtgaatggagcacgaggcgtcgtggttggttttgag
tctggaaaacacggactcccacgtgtgcgtttcctgtgcggcgtcacagaggtgctgaag
ccagagcgctgggtgtttaagtctggtggtgggatccacctgagccgacagcagctgcca
ctcaaattggcctgggccatctccatccacaagagccagggaatgacgctggactgtgtg
gaaatctctttagctcgtgtgtttgagagcggccaggcttacgtggccctgtctcgggct
cggaacctcgagggtctaagggtcatggactttgacccccgcgtggtccgggcagaccca
gatgtcctcctcttctacagaaaactgaggaaggagaggttgctcatgcaggcctccatg
gaagactttgttagcaacaataaagaaaatgcatggtga
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