Oreochromis niloticus (Nile tilapia): 100697359
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Entry
100697359 CDS
T06104
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100697359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100697359
Membrane trafficking [BR:
onl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100697359
Protein recycling
Other Rab GTPase associated proteins
100697359
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
FlgK_D1
UPF0242
Motif
Other DBs
NCBI-GeneID:
100697359
NCBI-ProteinID:
XP_005473472
Ensembl:
ENSONIG00000013249
LinkDB
All DBs
Position
LG12:19449361..19454489
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AA seq
460 aa
AA seq
DB search
MWMDKQRGIRVSQEELLCKNACGYYGNPAWQGLCSKCWRERARAAGTPREEIRPRSDGTL
PTFSKFEEKKNIEKGRRINTVRRLFWGSPSPPKPQEPSETRANVLKAYENLEPGDFTGFL
KILRSPPSQRLQSRCTAFLNTMEAYHDLPVQKQSDLVQDFYQSFAEYFSSFPEAQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLGVPFPDEKVSVTGDP
FLPAITAIIEMDAKRAPQDKLACISKCSQHVFEALSRSNSEPANADDFLSSLVYVLLKAN
PPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALSLSPEEFEGYMLG
QRTPSALNRRQQVISDTQNLLEDLKGRQEKLDQGMDALNVQLQKWVQEVHSQLDETRSQF
VLSQKEITAQKEVLLSTQDNKEESVLVLEDQDGGLRETGC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggataaacagagaggaatcagagtttctcaggaggagctgctctgtaagaac
gcctgtggttactatggaaacccagcatggcagggtttgtgctccaagtgctggagagag
agggcacgggctgctggaaccccgagagaagaaattagaccgcgcagtgatggaacgctc
cccacattctccaaatttgaggagaagaaaaacattgagaaaggtcgtcgaattaacaca
gtgagaagactcttctggggcagcccatcgcctccaaaacctcaagagccttctgaaacc
cgtgcaaatgtcttaaaagcctacgaaaaccttgagcctggagacttcactggtttccta
aagatacttcggagtcctccttcccagcgcttgcagtcccgctgtacagcttttctcaac
acaatggaggcataccatgatctgccggtgcagaagcagtcagacctcgtgcaggatttt
taccagtcttttgctgaatattttagcagttttcctgaagctcaggtcactcagataatg
gagcatgtagagaagttaataatgacacggctgcacaaatgggttttctgccatgacagc
tgtgatgatgaacagaaggacctggctctccagagaaggatccgttctttgaactgggtt
acgccgcagatgctaggcgtaccttttcctgatgaaaaggtctcagtcacaggcgacccc
tttctgcctgctataactgccataatcgaaatggatgccaaacgagcacctcaagataaa
ctcgcgtgcatttccaaatgcagccagcatgtcttcgaagccctctcccgctcaaacagt
gagcctgctaatgctgatgacttcttgtcaagcctggtttacgtgttgctgaaggccaat
ccgcctcgcctccactccaacatgcaatacgtgattcgttttgggctccctcacagtctg
atggcgggagagagcggctactatttcactaatttgtcctgtgctgtggccttcattgaa
aagctggatgggccggcactcagcctcagtccagaagagtttgaaggctacatgctgggt
cagcgtactccctcagcattaaacaggaggcagcaggtgatcagtgacacacagaacctg
ctagaggacctcaaaggcaggcaggagaagctggaccaaggtatggatgctctcaatgtg
cagctacaaaagtgggtccaagaagttcattcacagctggacgagaccagaagccaattt
gtcctgtctcagaaggagataacggctcagaaggaggttttgttgtccactcaggataat
aaggaggagtcagtgctggtgcttgaggatcaagacggaggtctgagggaaacaggctgt
tag
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