Oreochromis niloticus (Nile tilapia): 100697857
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Entry
100697857 CDS
T06104
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100697857 (sox1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100697857 (sox1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
SelP_N
Motif
Other DBs
NCBI-GeneID:
100697857
NCBI-ProteinID:
XP_005450142
Ensembl:
ENSONIG00000021020
UniProt:
I3KYX6
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All DBs
Position
LG23:complement(12277510..12279558)
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AA seq
354 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGGGAGGKVPQERIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSSAAVGMGGGQRLESPGGGHAGANAGYATHVNGWANGAYSGQVAA
AAAAAHAMMQEAQLAYTQHPGTGAHPHHPHPHHHPHHHPHNPQPVHRYDMSALSYSPISN
SQSYMSASPPGYGGITGYTHQHQSSGVSPVSGAIGGTLGSLVKSEPSVSPPVSTARAPPP
CPTGDLRDMISMYLPTGEVAGDSSVQSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtggtgccccagaccaacccg
tccaacccggggggacacgcgggaggcggaggcgggggggccggaggcaaagtcccacag
gagaggatcaagagacccatgaacgccttcatggtgtggtcccggggtcagcggaggaaa
atggcacaggagaaccccaagatgcacaactcggagatcagcaagcggctgggcgcggag
tggaaagtgatgacggaggcggagaagaggccgttcatcgacgaggcgaagcggctccgg
gccatgcacatgaaggaacacccggactacaagtaccggccgcggagaaagaccaagacg
ctactgaagaaggacaaatactcgctggccggcgggctcctcggctcctcagcggctgtg
gggatgggcggcgggcagcggctggagagccccggaggggggcacgcgggggcaaacgcg
ggctacgccacgcacgtgaacggctgggccaacggcgcgtactcgggccaggtggcggcg
gcagcggcggcggctcatgccatgatgcaggaggcgcagctggcatacacgcaacacccg
ggcaccggggctcacccgcaccacccgcacccgcaccatcacccgcaccaccatccgcac
aacccgcagcccgtgcacaggtacgacatgagcgccttatcttacagccccatctcaaac
tctcagagctacatgagcgcgtctccgccgggctacggtggcatcaccggctacacccac
cagcaccaaagctccggcgtgtctccggtgtccggggccatcggcggcactttggggtct
ctcgtgaaatctgagccgagcgtcagcccgccggtgtccaccgcgcgcgcaccgccgccg
tgccccacgggggacctgcgggacatgatcagcatgtatctgccgaccggcgaggtggcg
ggggactcctccgttcagagcagactgcacgtgctccacccgcagcactaccagagcagc
ggctccactccggtaaacgggacggttcctctgacccacatttaa
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