Oreochromis niloticus (Nile tilapia): 100698090
Help
Entry
100698090 CDS
T06104
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X2
KO
K08331
autophagy-related protein 13
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04136
Autophagy - other
onl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100698090 (atg13)
04136 Autophagy - other
100698090 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100698090 (atg13)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100698090 (atg13)
Membrane trafficking [BR:
onl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100698090 (atg13)
Atg1 complex
100698090 (atg13)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100698090 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100698090
NCBI-ProteinID:
XP_003455930
Ensembl:
ENSONIG00000015211
UniProt:
I3KDF0
LinkDB
All DBs
Position
LG23:complement(12794472..12803651)
Genome browser
AA seq
505 aa
AA seq
DB search
MESDLKPQDQKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKEIKVSYAVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPI
GTITLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRPANMGHPCNYRAPDEE
DGGQFAGVQDSQEVCATSFSTSPPSQLYASRLSYQPTALAGAAEFCHPASNPNQVLHAGK
EGGALLMPPHGADVHLTVEHAPNTPSSSGDDDGLSQSGEGRKEEGRRSVSPSDPVESLNA
FTRKVGAFVNKPSTQITAASLDLPFAAFAPRGLDSEENDPMVHPPDSPPCPSPLQGSLHS
QGSEGSGQQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDL
DSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacctgaagccccaggatcaaaaggacttagacaagtttattaagttcttt
gcacttaagactgtccaggtgatagtccaagccaggctgggagagaagatctgcactcgc
tcgtcatcatcgcctactggatctgactggtttaatttggccatcaaagacatcccagag
gttacccatgaagccaaaaaggcactggctggccagcttccaggcattgggcgctccatg
tgtgttgagatctctctgaagacatcagagggggactcgatggagttggagacttggtgc
ctggagatgaatgaaaagtgtgataaggaaatcaaggtgtcgtatgcagtctataaccgt
ctgtctgtcctcctgaagtctctgctggccatcaccagagtcacgcctgcttataaactg
tccagaaagcagggacacgactatgtcatactctacaggatctacttcggagaggtccag
ctgagtgggttaggagaaggtttccaaacggtgcgcgttggagttgttggcacccctatc
ggtacaatcacgctttcatgcgcctaccgcaccaatctggcattcatgtctaacaggcaa
ttcgaaaggtcggctcccatcatggggatcatcgtggatcactttgtggatcctccttgc
agcagccagcgtccagcaaacatgggccatccctgcaattacagggctcccgatgaagag
gacggagggcagtttgcaggcgttcaggactcacaggaggtctgcgccacctcattctcc
acctcccctccctctcagctgtacgcctccaggttatcctaccagccaacggctttagca
ggagctgcagagttttgtcaccctgcttccaatccaaaccaggtcttgcatgctgggaag
gaaggtggggctctgttgatgcctcctcatggagcagatgttcatctgacagtagagcat
gcccccaacacaccgagcagcagtggcgatgatgatggcttgtcgcagagcggagaagga
cgcaaagaagaagggcggaggagcgtttccccctcggaccccgtggagtcactcaatgcg
ttcacaaggaaggtcggagcctttgttaataaacccagcacacagataacagcagccagt
ctggacctgccatttgctgcgtttgctcctcgaggcctggactctgaggagaatgatcct
atggttcaccctccagattctcctccctgcccgtcccccctgcagggcagccttcattct
cagggctcagagggatcagggcagcaggacgactttgtcatggttgattttcgtccggcc
ttctctaaagacgacttgttgccgatggatctgggcaccttctacagagagtttcagaat
cctccacaactggccagtctctcgcttcacatcagttcccaatcgatggctgacgacctg
gactctctgccggagaagctgcgcgtctatgagaaaaacatcgacgagtttgacgccttc
gtggacatgcttcagtag
DBGET
integrated database retrieval system
