Oreochromis niloticus (Nile tilapia): 100698093
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Entry
100698093 CDS
T06104
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100698093
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100698093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
100698093
NCBI-ProteinID:
XP_003456660
Ensembl:
ENSONIG00000033092
UniProt:
A0A669CKZ8
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All DBs
Position
LG16:27146953..27172409
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AA seq
906 aa
AA seq
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MGLKDHLEDGTGHILSPGLDLDYLHVEGAERQAGNLGAGVTVKSSNTVGSRGISSIIHSS
SSSSCSNFSEESAISDSEDERLQTGPGSDSKTPHHDQLHLHQREESSVFQPVRLDLAPNA
SPGDPPETFLTDPITHCRTKVEFALKLGYPEELVLLVLRKLGPDALINDILGELVKLGTK
IEMDQQGGQAVSQPPSSSLSSSVASTSNSSLDSSRLLCPSHLLEDKENLRPVVVDGSNVA
MSHGNKEVFSCQGIKLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKEK
ILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLM
YSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQPCPYGKKCTYGHKCKFYHPERG
SQPQRAVADELRASAKISSVASRGLLEHALMAKSQKNGQSEGMAEAQLIRDTGKKQPNRS
LQSSFSELLEDKPQVSSKVEEQRRNSSSSGSCSNNIVGHPAPGGPPSSGHLERWEHPDGS
TGGSASIAGASGPNKVESYYRCSSPEVGYNSLVKAYSGLSLVVPQTPECFFPGELRTSSL
ASDCSSEGSVSSDSFSPDPVLDDSPKCHHHHPHHHHRHYSGQYPHQASRVSPRLSQHSPR
GYVHPQGLWRQRDFGIEDTPASVTSHVSPRHVNTASVYIQPQQQLQLLTNFPGDPPHPQH
PPQTPTAHARSQSFPRSHNTVGSLWPEHGLQDRVCEGSPVHSRRNYSVLTQQPQHQQNWD
PNYEPPPKPYYDLFSYKSFPQVHGHSPWGQQVHSSPHGLLIPGLPSLSQQSLPSVPTHKS
HMPSATQHAKPTALGRYQDLRERVFVNLCGIFPPDLVRMVMTRNPHVTDAQELAAAILME
KSQHSS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcccagggctggat
ctggactacctacacgtggaaggtgctgaacggcaggctgggaatttaggagcgggtgtc
actgttaaaagcagcaatactgttggtagcagaggcattagctctatcattcattcaagc
agcagtagcagttgcagtaacttttctgaagagagtgctatctctgacagtgaagatgaa
aggctccagactgggcctggttctgactctaaaacaccgcaccacgatcagcttcaccta
caccaaagggaggagtcctcagtctttcagccagtcaggctggacctggcaccaaatgcg
tctcctggagaccccccggaaacatttttgactgaccccatcacacactgccgcacaaag
gtggagtttgctctcaaactaggctaccccgaagagctagtgttgctggtcctgaggaaa
ctaggccctgacgcacttatcaatgatatactgggagagctggttaaactgggaaccaaa
atagagatggatcagcaaggaggtcaagctgtctcacagcctccgtcgtcctctttgtcc
tcctcggtggcctccacctccaactcctctctggattcttctcggctactgtgtccgtcc
cacctgctagaagacaaagaaaacctgcgacctgttgttgtggatggaagcaatgtagcc
atgagtcatggaaacaaggaagttttttcctgccaaggtatcaagctagcagttgattgg
ttcttggagcgaggccaccgtgacatcacagtttttgtccctgcttggagaaaggagcag
tcgcgacctgatgctcttatcacagaccaagagatcctgcggcgtctggagaaagaaaag
atcttggttttcactccatcgcgacgtgttcagggacgtcgtgtggtttgctacgatgac
agattcatcgtcaaactggcctacgagtcagacggtataattgtttcaaacgacaactac
cgtgacttagcgaatgaaaagccagagtggaagaaatttatagatgagcgcctgctgatg
tactcgtttgtaaatgacaaattcatgccacctgatgacccgctgggacgccatggacct
agtcttgagaatttcttgagaaagaggcctgttattcctgagcatagaaagcagccatgt
ccttatggaaaaaagtgcacatatggccacaagtgcaagttttatcaccctgaaaggggt
agtcagccccagcgagctgtggcagatgaactccgtgccagtgccaaaatttcatcagta
gcttcaagaggcctgctggaacatgccctgatggcgaagagccaaaaaaatggtcaatca
gaaggaatggctgaagcccagctgattcgggataccggaaaaaaacagccaaatcggagc
cttcagagctccttcagtgagctcttggaggacaaacctcaagtcagttccaaagtggag
gaacagaggagaaacagcagcagtagtggcagctgtagcaataacattgtaggacatcct
gctccagggggaccgccttcatcgggacatctggaaagatgggaacaccctgacggaagt
actggaggcagcgccagtattgccggggcttcaggaccaaacaaagtcgaatcttattac
agatgcagttctccagaggtgggctacaactctctggtaaaggcttattcaggactcagt
cttgtagtgccacagactcctgaatgcttctttccaggtgagctccgcacaagttcactg
gcttcagattgtagcagtgaaggcagtgtcagctcagattctttctctcctgaccccgtg
ttagatgatagccccaagtgccatcaccatcatccacaccaccatcatcgtcactactct
ggccagtacccccaccaggcaagccgtgtgtctcctagactgagccagcattctcctcgt
ggctatgtccatcctcaaggactttggagacaacgtgattttggcatagaagatactcca
gcatccgtcacctctcacgtttcgccacgtcacgtcaacaccgcttccgtctacatccaa
ccccagcaacagctacagctgctcaccaattttccaggggacccacctcatccacaacat
ccaccccaaacacccactgctcacgcccggtctcagagcttccctcgcagccacaatacg
gtgggctccctttggccggaacacgggcttcaggacagagtgtgtgaaggttcaccagtt
cattctagaagaaactactctgtgctaacccaacaacctcagcaccagcagaactgggac
cctaattatgagccaccccctaagccttactatgatctgttttcctataagagttttcca
caagtccatggacactctccttggggccagcaagttcattcatcaccacatggcctttta
ataccaggtcttccatcgctttcgcagcagtctcttccatctgtccctacccacaagagc
cacatgccctcagcaacccagcacgcaaagccaactgccttgggtcgataccaggacctt
agggagagggtgtttgttaacttgtgcggcatcttccctccagatttggtgaggatggta
atgaccaggaacccacacgtgacggatgctcaagagcttgcagctgccattttaatggag
aagtcacagcacagttcttga
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