Oreochromis niloticus (Nile tilapia): 100698188
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Entry
100698188 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04371
Apelin signaling pathway
onl04514
Cell adhesion molecules
onl04520
Adherens junction
onl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100698188
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100698188
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100698188
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100698188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100698188
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100698188
04090 CD molecules [BR:
onl04090
]
100698188
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100698188
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Major cadherins
100698188
CD molecules [BR:
onl04090
]
Proteins
100698188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_2
Antig_Caf1
Motif
Other DBs
NCBI-GeneID:
100698188
NCBI-ProteinID:
XP_019221888
Ensembl:
ENSONIG00000004507
LinkDB
All DBs
Position
LG13:complement(34207413..34219982)
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AA seq
906 aa
AA seq
DB search
MGTALFAVFGALIVVFQVSALEIANRPTCVPGFESELLIFRVSRERLRQGMRLGKVGFTD
CTERTVFLFSTDDSHFTVKADGTLTVNREVVLHKGHQNFFIHSWDSQGHKITVPVSVVHP
EHHHRHHHGKHHHGDHTNFNIQHHSTEVDSINHTENATEPQVPVLQFSKSGGGLRRRKRD
WVIPPLNVPENQRGTYPLKVAQIRSNEDKARKLFYSITGPGADLPPVDRFRMDKQTGNLY
VTQPLDREETASYTFLAHAVADGAGQAEDPMEIIVNVIDQNDNKPYFTVEYNANVAEATA
IDTEVVKVEAKDDDEPDNLNSDIRYRILNQDPPLPTDHMFEINPVTGSIRVTDRGLDREK
YPQYTLTVQAADMAGEGLTGQTKVILTVTDSNDNAPVFTQSLYTATVDENKKDVEVVRMI
VTDEDEPQTPAWNAKFKIVSGDPDGLFTVKTGTNKQEGILSTAKGLDFERASKHTLLISV
ENEIPFAPGVSVVTSTATVVVNVKDVNEAPIFDPKEKLVVKPEDLAVDEVVVQYTASDPD
TARKQTVSYKILTDPAGWLNVDKDTGLIKVRRLMDREATFVTNNRYTATIGAYDNDAVPA
TGTGTLIIQLEDVNDNAPVVKPHDIKVCNKDPAPQLLSVTDEDGPEFGPPYSVSLQGISK
TNWTARMNDSRTGIILNLATELPSGEYSVILRVGDKHGLEQDSIITAKVCDCRGAEAACQ
DYRAAGGSNLPLILGILGAILLLALLLLVLLFAKQRKKEKKEPLLLDDGVRDNVYYYDEE
GGGEDDQDYDLSVLHRGLDNRPDVLRNEVVPNFMPAPQYRPRPANPEEIGNFIEDNLKAA
DNDPTAPPYDSLLVFDYEGGGSDAGSLSSLNSSSSGDQNYDCLNEWGPRFKKLADMYGGG
DDDDML
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcattgttcgcggtttttggtgctttaatcgtcgttttccaggtctcagca
ctagagatagctaacaggccaacatgtgtgcctggatttgagtcagagctgctgattttc
agagtgtccagggaacgtctgaggcagggcatgaggctgggcaaagtgggcttcactgac
tgcacagagcgcacagtatttcttttcagcactgatgacagtcactttactgtgaaggca
gatggtacattaacggtaaacagagaggttgttcttcataaaggacaccagaacttcttc
atccactcctgggactctcaaggtcacaaaataacagttccagtcagtgtcgttcaccct
gagcatcaccatagacatcaccatggaaagcaccaccatggagatcacacaaacttcaac
attcagcatcacagtactgaagtggactctattaaccacacagagaatgccactgagcca
caagtgcccgttctgcaattttccaagtctggtggagggctgaggaggaggaaaagggac
tgggttattcctccactcaatgttcctgagaatcagagaggaacctatcccctgaaagta
gctcagatccgctctaatgaagataaagcaaggaagctcttttacagcatcactggtcct
ggagctgatctgcctcctgttgatcgtttcagaatggacaaacagactggcaatctgtat
gtaacacaaccactcgacagagaggaaacggccagttacacgtttctagcacatgctgtg
gctgatggagcaggacaagctgaggatcccatggagattatagtcaatgtgatcgaccag
aacgacaacaaaccttattttacggtggagtacaacgcaaatgttgctgaggccacggcc
atcgacacagaggtggttaaagttgaggccaaagatgatgatgagccagataatctcaac
tcagacatccgctatcgtattctgaaccaggacccaccgctgcccactgaccacatgttt
gaaatcaacccagttactggaagcatcagagtcactgatagaggattagacagagagaaa
tatccacagtacactctgacagtacaagcagcagatatggcgggagaagggttaactgga
caaacaaaagtcatcctcacggtgacggacagcaatgacaacgctccagtcttcactcag
agcttatatactgcaacagttgatgaaaacaaaaaggatgttgaggtggttaggatgatt
gtaacagatgaggatgaaccacaaactccagcctggaacgccaagttcaagatcgtcagt
ggtgatcctgatggacttttcacagtaaaaacaggaactaacaaacaggaaggaatcctt
tctactgcaaagggactggactttgagagggccagcaagcacactctgttgatttcagtg
gagaatgagattccttttgctcctggtgtttctgtggtcacttctaccgccacggtggtg
gtaaatgtgaaggatgtgaacgaagctccaatatttgatccaaaggagaagcttgtggta
aaaccagaggaccttgctgtggatgaagtcgtggtacagtacactgcttcagacccagac
actgcacgcaagcagacagtctcgtacaaaatattgactgaccctgcaggctggctgaac
gtggacaaggacacaggccttattaaagtgagaagactcatggacagagaggctaccttc
gtcacaaacaacagatacactgcaaccattggtgcatatgataatgatgctgtcccagct
acaggaactggtaccctgatcattcagctggaagatgtcaatgacaatgctcctgtcgtt
aagccgcatgacattaaggtgtgcaacaaggatccagctcctcagctgctgtcagtaaca
gatgaagatggaccagaatttggacctccctactcagtgtctttacagggcatctcaaag
accaactggaccgctaggatgaacgactccagaacaggcatcatcttgaatttggccact
gagctgcccagtggagagtacagtgttatactgagagtgggagacaaacatggcttggag
caggacagcatcatcacagctaaagtgtgtgactgtaggggcgcagaagcggcatgccaa
gattaccgtgctgcaggtggcagcaacctgccccttatcctcggaatacttggagccatc
ctgctgctcgcgctgttgctgctagtgctgctgtttgcaaaacagaggaaaaaggagaaa
aaggagccactcctgctggatgatggtgtcagagacaacgtctattactatgatgaagaa
ggaggtggcgaggacgatcaggactatgacctgagtgttctccaccgtggtctggacaac
cggccggatgtgttaaggaatgaagtggtgccaaacttcatgcctgctcctcagtaccgg
ccacggcctgccaaccccgaggagattggcaacttcattgaagataatctgaaggctgcc
gacaacgacccaacagcacccccttatgactccctgctggtgtttgactatgagggaggt
ggttctgatgcaggaagtctctcctctttgaactcttcaagcagtggagaccagaactat
gactgcctcaatgaatggggccctcgcttcaagaaactggccgacatgtacggaggagga
gatgatgacgatatgctgtaa
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