KEGG   Oreochromis niloticus (Nile tilapia): 100698213
Entry
100698213         CDS       T06104                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04514  Cell adhesion molecules
onl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100698213 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100698213 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:onl00535]
    100698213 (sdc3)
Proteoglycans [BR:onl00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   100698213 (sdc3)
SSDB
Motif
Pfam: Syndecan Trypan_PARP
Other DBs
NCBI-GeneID: 100698213
NCBI-ProteinID: XP_019206113
LinkDB
Position
LG22:22413843..22455599
AA seq 427 aa
MELPWLLALTALLAHATTGQKWSLPIDDEGSARDEFYDDEDLYSGSGSGFPEIGMRPTSV
AVTFTTEEALLLSTTQATDLAPSAPPAAEPSPNPEDPTTTPLLTEAEGESGVFLDRDLER
ERELEQERERERERERERVREMEREKEREREREKERERERERERERERERERESERQREL
ERIQATARTTAAPRSPAAVPMVTTNPAASPAESAAPSAGSDDLSATEEEEDIYLSPEPSL
LYPGFTDETTTEEDMSITPESTPEPTTAATTIATTVKTRTPFRPRIPMMTTTQAVPTERT
TRPQQPTTTQEGTNEVGAAGPSGDYEIMDGRRNNLGSEMAGGPDLIGNSVDGGSSAAQLP
QKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPD
KQEEFYA
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggagctgccttggctgctggcgctcacggcgctgcttgctcacgccaccacgggacag
aagtggtcgctgcctatcgatgacgaagggtcggcgagagatgaattttacgacgatgag
gatctctactcgggctccggctctggctttcctgagatcggtatgaggccaacatcagta
gctgtcacgttcaccacagaggaagccctacttctctccaccacccaagcaaccgacctc
gctccctctgcaccgcctgcagcagagcctagccccaacccagaggacccaacgaccacc
cctcttctcaccgaggctgagggagagagcggcgtgttcttggatagggacctggagagg
gagagggagctggaacaggagagggagagagaaagggagagggaaagggagcgtgtccga
gagatggagcgagagaaggagagggagagagagagagagaaggagagggagagagagcgg
gagagggagagagagcgggagagagagagggaacgtgagagcgagcgacagagagagctg
gagagaatccaggccaccgcccggaccactgccgcgccccggtcccctgctgccgttcct
atggtcaccaccaatcctgcagccagtcctgccgaaagtgcagcgccctctgctggttca
gatgacctgagcgccacagaagaagaggaggacatctacctttcgcccgagcccagcttg
ctttacccaggattcactgacgaaaccactacagaagaagacatgtccatcacaccagag
tcaactcctgagcccaccacagctgcaacaaccattgctaccactgtcaagaccaggacc
cccttcaggcccaggattcccatgatgacaacgactcaggcggtgccaacagagagaacg
acccgcccacagcagcccacaacaacacaggagggtaccaacgaagtgggtgctgcagga
ccaagtggagattatgaaatcatggatggacgccgcaataatcttggcagcgaaatggca
ggaggtcccgatcttatcggcaactctgtggacggaggcagctccgcggcccagctaccg
cagaagaacatcctggagagaaaagaggtcttgatagcggtgatagtgggaggcgtggtg
ggcgccttgttcgctgccttcctggtgatgctgctggtgtacaggatgaagaagaaggac
gagggcagctacacgctggaggaacccaaacaggccaccgtcacctaccagaaaccggac
aagcaggaggagttttatgcataa

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