Oreochromis niloticus (Nile tilapia): 100698213
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Entry
100698213 CDS
T06104
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecules
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100698213 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100698213 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
onl00535
]
100698213 (sdc3)
Proteoglycans [BR:
onl00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100698213 (sdc3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
100698213
NCBI-ProteinID:
XP_019206113
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Position
LG22:22413843..22455599
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AA seq
427 aa
AA seq
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MELPWLLALTALLAHATTGQKWSLPIDDEGSARDEFYDDEDLYSGSGSGFPEIGMRPTSV
AVTFTTEEALLLSTTQATDLAPSAPPAAEPSPNPEDPTTTPLLTEAEGESGVFLDRDLER
ERELEQERERERERERERVREMEREKEREREREKERERERERERERERERERESERQREL
ERIQATARTTAAPRSPAAVPMVTTNPAASPAESAAPSAGSDDLSATEEEEDIYLSPEPSL
LYPGFTDETTTEEDMSITPESTPEPTTAATTIATTVKTRTPFRPRIPMMTTTQAVPTERT
TRPQQPTTTQEGTNEVGAAGPSGDYEIMDGRRNNLGSEMAGGPDLIGNSVDGGSSAAQLP
QKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPD
KQEEFYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagctgccttggctgctggcgctcacggcgctgcttgctcacgccaccacgggacag
aagtggtcgctgcctatcgatgacgaagggtcggcgagagatgaattttacgacgatgag
gatctctactcgggctccggctctggctttcctgagatcggtatgaggccaacatcagta
gctgtcacgttcaccacagaggaagccctacttctctccaccacccaagcaaccgacctc
gctccctctgcaccgcctgcagcagagcctagccccaacccagaggacccaacgaccacc
cctcttctcaccgaggctgagggagagagcggcgtgttcttggatagggacctggagagg
gagagggagctggaacaggagagggagagagaaagggagagggaaagggagcgtgtccga
gagatggagcgagagaaggagagggagagagagagagagaaggagagggagagagagcgg
gagagggagagagagcgggagagagagagggaacgtgagagcgagcgacagagagagctg
gagagaatccaggccaccgcccggaccactgccgcgccccggtcccctgctgccgttcct
atggtcaccaccaatcctgcagccagtcctgccgaaagtgcagcgccctctgctggttca
gatgacctgagcgccacagaagaagaggaggacatctacctttcgcccgagcccagcttg
ctttacccaggattcactgacgaaaccactacagaagaagacatgtccatcacaccagag
tcaactcctgagcccaccacagctgcaacaaccattgctaccactgtcaagaccaggacc
cccttcaggcccaggattcccatgatgacaacgactcaggcggtgccaacagagagaacg
acccgcccacagcagcccacaacaacacaggagggtaccaacgaagtgggtgctgcagga
ccaagtggagattatgaaatcatggatggacgccgcaataatcttggcagcgaaatggca
ggaggtcccgatcttatcggcaactctgtggacggaggcagctccgcggcccagctaccg
cagaagaacatcctggagagaaaagaggtcttgatagcggtgatagtgggaggcgtggtg
ggcgccttgttcgctgccttcctggtgatgctgctggtgtacaggatgaagaagaaggac
gagggcagctacacgctggaggaacccaaacaggccaccgtcacctaccagaaaccggac
aagcaggaggagttttatgcataa
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