Oreochromis niloticus (Nile tilapia): 100698391
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Entry
100698391 CDS
T06104
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
onl03009
]
100698391 (rrp12)
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
90S particles
Other 90S particles
100698391 (rrp12)
Pre-60S particles
Other pre-60S particles
100698391 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100698391
NCBI-ProteinID:
XP_003441093
Ensembl:
ENSONIG00000009528
UniProt:
I3JSX8
LinkDB
All DBs
Position
LG13:18941990..18952059
Genome browser
AA seq
1288 aa
AA seq
DB search
MVKSGKLRSGTASKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPTGKSDLTVDALKLHN
ELQAGPLEIGTRKDAAMEEEPEEAVSQRSSGTFLSGLSDCSNLTFRKVQRFWESNSAAHK
EICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVDTAESQAAVAYLLNLVMKRVPAPV
LKSKFSDTTKALMDVMSKQATSDTTSALRWILSCLATLLRKQDASVWTYPSTLQAYHGLL
SFTVHNKPKVRKAAQQGVCSILRGSDFLFTENAPAHHPAAVTTAKFCIKEMEQAGGSKED
TTTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQAFHQLFSGKPNAST
LSPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHIHLASLQSSLSLGHLPRLFSAAM
SCLLSPHTQVVSAATNTLKTLLIECVAPHMEEMGTVTGTASSGNPSYVCKMFRIVEEGLS
YRFHASWPFVLQILGCFYRAAGKQAHSIMTKSLQSLADLRSTPHFAFSGELDLAVGGAVE
SMGPEVVLGAVPLNITGYDDDLEFPRSWLVPVIRDHVKNTHLGFFTSYFFPLASTLKQRA
VELEQAGQKLEAKVYDTLQLQIWTMLPGFCTCPVDVLTAFKGIARTLGMAVNERPDLRLT
VCQALRTIINKSCSTEEEKAEVGRFSKNFLPILFNVYSQEPAIGESGTYRMAVLDTIKVY
LGITEMQMICTFLQKATERLTSAESNEFIRLSVMDLVVAMAPCVDEVTMTKTFELIRPYL
ETKEPSMQKKAYRVLEEMCGGERDACRSFVMSNLETLKVVLLETLKNASSPAKRPRLKCL
SHIVRRLNEDHKDFITTLLPEVIICTKEVSVGARKSAYNLLVEIGNAFVRFCGNTKDAME
QYLVMVYAGLTGSITMITCTVLALTRLVFEYKDSIELITMEQLLQNICLLLSSHTREVVK
AALGFIKVILFIMDPKTLASHVTVMMEGIGNIRDDMRRHFRTKLKNIFTKFIRKFGFELV
KSMLPAEHHKVLTNIRKAEARNKRRKQATEEQDDSESEQEAPKAKGESIEEILAESDSDL
SEDEGKPRGAQKKAGKQQKGRAWLKEGEEDDPLNFLDPKVSQRVLATNPELKKSAKADHG
FKVTSDGRLIIKEDEDEDVKDKDGGEMEDILEEAGVKSKKSQKRKFDDDNFDDDMDIEPQ
LKYKAGGSGIHRPLGYGQEFGGDYKSKKGKGDVKKKGKLDPYAYIPLKKAQLNRRKRAKL
QGQFKGMVRGAQKGALSGKKMQKKKRKA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcggggaaacttcgctctgggacggcgtcgaagctcaaacggtggaaaaag
ggacacagcagcgactctaacccgcagacgagtcgctttcgtcaggctgctaaaagccgc
ttcttcagccgacccactggaaagagtgatctcacagtcgatgctctcaagcttcacaat
gagctgcaggccggtccgctggagatcggcactcgtaaagatgccgccatggaagaagag
ccagaagaggctgtatcacaaagaagttcgggtaccttcctcagtggcctgtcagactgc
tccaaccttacctttagaaaggtgcagcgcttctgggagtctaattcagctgcacacaaa
gagatctgtgcagtgttggcagcagttactgaagtgatccgcagtcaaggtgggaaggag
actgaaaccgagtactttgctgctttgatgaccaccctggaggttgtggatacagcagaa
tcccaggctgcagtggcatacctccttaaccttgtcatgaaacgggttcctgctccggtc
ctcaagtcgaagttctccgacaccaccaaggctctgatggatgtcatgtccaaacaggcc
acatctgacactacctcggcactcagatggatactgtcatgtctggccactctgttgagg
aagcaggacgcatctgtgtggacttacccatctactctccaggcttaccatggccttctc
agcttcacagtgcacaacaagcctaaggtccgcaaagcagcacagcaaggtgtttgctcc
attcttagaggcagtgacttcctatttacagaaaatgctccagcccatcatcctgctgca
gttaccacagccaaattctgcataaaagaaatggagcaagcaggaggcagtaaagaggac
acaaccacactccatgtgcttggccttttgaaggagctgatggggacgtttcctctggga
gctgtcaagtcctgttgtgagactctgctgcgagtgatgacactcagtcatgtgttggtg
accgctagtgccatgcaggcctttcatcagctgttcagtgggaagcccaatgcttcgacg
ctctcaccagaactcaacgcacagatcatcactgctctgtacgattacctgcccagtgag
aatgatttacagcctctgctcgcttggcttgctgtcatggagaaagcgcacattcacctg
gcgagtttgcagagttctctgagtttgggtcacctccctcgcctcttttctgctgcgatg
tcctgcctgttgtcacctcacactcaggtggtttctgcagccaccaacacattaaagacg
ttgttgattgaatgtgttgcccctcatatggaggaaatgggcaccgtcactggcacagca
tcttcagggaacccctcctatgtctgcaaaatgtttcgtattgtagaagaaggattgtcc
tatcgcttccacgcctcctggccgtttgtgctgcagattctgggttgcttctatcgagct
gcagggaaacaagctcattccatcatgactaagtctctgcaatctctggcagacctgcgc
tccactcctcactttgccttcagtggagagttggacctggctgtaggaggagctgtggag
agcatggggcccgaagtggtgctcggtgccgtgcctctcaacatcactggctatgacgat
gacttggagttcccacgcagctggctggtcccagtcataagagatcatgtgaagaacact
catcttggtttcttcacttcttatttcttccctctggcctctacacttaaacaaagagct
gtagagttggagcaagcggggcaaaaactggaggccaaagtctatgacaccttacagctt
cagatttggactatgcttcctggcttctgtacgtgccccgtggacgtgctgacagctttt
aaaggcattgcccgcactcttggtatggctgttaatgaacggccagacctgaggctcaca
gtatgtcaggccctacggaccattatcaacaagagctgctcaacagaagaagaaaaggcc
gaagtgggccgcttctctaagaatttcctgcccatccttttcaatgtgtacagccaggag
cctgctattggagagtctggaacctacagaatggctgtgctggacaccatcaaagtgtat
ttgggtatcactgaaatgcagatgatctgcacattcctgcaaaaagccacagagaggttg
accagcgcggagtcaaatgagttcatacggctgtcagtgatggatcttgtcgttgctatg
gctccctgtgtcgatgaagtcaccatgactaaaacctttgagctgataaggccatatttg
gagacaaaagagccaagcatgcagaagaaggcgtaccgtgtgctagaggagatgtgtgga
ggagagagagatgcttgtagatcgtttgtcatgtccaatctggaaacactcaaagtcgtg
ctgcttgagactctgaaaaacgcctcttcacctgcaaaaaggccgagacttaagtgtctg
agccacatcgtaagaaggttaaatgaagatcacaaagactttatcaccacgctgctgcca
gaggtgatcatatgtacgaaggaggtgtctgttggtgctcgtaagagtgcctataatctg
ctggtggaaataggaaatgcttttgtccgcttctgtggaaatactaaagatgccatggag
cagtatttagtgatggtgtatgcaggactcacgggctccatcaccatgatcacttgcaca
gtgttggctctcacacgcctcgtgtttgagtacaaagactctatagagctgatcaccatg
gagcagctgctgcaaaacatttgtcttctgctgtcgtctcataccagagaggtagtgaag
gctgccttagggttcatcaaggtcatcctcttcatcatggaccccaagacactggcctcg
catgtcactgtcatgatggaaggcattggaaacattagggatgacatgagaaggcacttc
agaacaaagctgaagaacatcttcactaaattcatcagaaaatttggttttgagctggtg
aagagtatgctccctgcagagcaccacaaggtgctgacaaacatccgcaaggctgaggct
cggaacaagaggcggaaacaggccacagaggagcaggacgactctgaaagtgagcaggaa
gcacctaaagcaaagggtgaaagtatcgaggagattctcgctgagtcggacagcgatttg
tcagaggatgaaggaaaacctcgcggtgctcagaagaaagcaggcaaacagcagaaagga
cgggcttggctcaaagagggagaggaagatgacccacttaacttccttgatcctaaggtt
tcgcagagagtgttggccacaaacccagagctgaagaagagtgccaaggctgaccacggc
tttaaagtgacctcagacggacggttgatcattaaagaagatgaagatgaggatgtaaag
gacaaagatggaggcgagatggaggacatcctggaagaggctggagtcaaaagtaaaaag
tcacagaagaggaagtttgatgatgacaactttgatgatgacatggacattgaaccccag
ttgaaatataaagctggaggttcaggtatccacagacccctgggatatggccaggagttt
ggaggtgattacaaatcaaagaaaggaaaaggagatgtaaagaaaaaagggaagcttgat
ccctacgcttacatccctctgaagaaggcccagctcaatcgcaggaaacgtgccaaactg
cagggccagttcaagggcatggtgagaggagcccagaagggggcgctgtctggaaagaaa
atgcagaagaaaaagaggaaagcctga
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integrated database retrieval system