Oreochromis niloticus (Nile tilapia): 100698448
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Entry
100698448 CDS
T06104
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100698448 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100698448 (rpap2)
Enzymes [BR:
onl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100698448 (rpap2)
Protein phosphatases and associated proteins [BR:
onl01009
]
HAD phosphatases
Fcp/Scp phosphatases
100698448 (rpap2)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100698448 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
100698448
NCBI-ProteinID:
XP_003438069
Ensembl:
ENSONIG00000010577
UniProt:
I3JWQ4
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Position
LG18:10761778..10771575
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AA seq
647 aa
AA seq
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METEERRRSGSSKKPAKKGGKRVKALTAEEEARRREELKEKLREKLELERRALKVVERLL
DDSVAEDFLVDCAKMITPANYRDTVEERSIAKLCGYPICPNKLGKIPTQQYKISTKTNKV
YDITERKCFCSNFCYKASKAFELQIPKTPLWVRQHESPPEIKLLKQGERGSSGEEVMLSE
RYLKEEDIENPVAAQDEDLHSSRDHPAGGSHSDVSDGEHEQDFVSSVVSQQQKPRVHWGD
LPKLSDKDDKGKQRKSETRKINTKEGNEEKIEPPQSQNTEEQRSMIEDEERKEADVRKTE
VTDAEKPKELQTTHTDQAAPRERELSELSSVEETTAKMSVCSLSETVTHSVPRSNPPAES
KEIPATNQNSHGQQELNITQVGMSKRGAAGLRDLLKNHAEAKPDSVRMNLLECLKNTLKE
WCTDETLTFLYGSDHSLGSPYAEVREEEGKEELDEDDLEDEVTADNTEDKKRPSAAAPNY
DTLRRETQDLELRVREFYKGTWILPDEKEEPNRKQVAVQESIKDPVLPLVDSHAQNLIQK
RITVEKLSSCLRNIVGPLHLTMSDITTDLNNLVRTFRFTNKNIIHKTPEWTLIAVVLLHL
LSEVSPLVREALETSASAEYLNTLMVELGLQDQDLLNLVQLFKSPAR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaggagagaagaaggagcgggagctccaaaaaacctgccaaaaagggtggg
aaacgtgtcaaagcactcaccgcggaggaagaagcgagaaggagagaggagctgaaggag
aagctgagggagaagttggagctggagaggagagctttgaaggtggtggagcggctcctg
gacgacagtgtggctgaggacttcctagtggactgtgccaaaatgatcaccccagctaat
tacagagatactgtagaggagaggtctattgctaagctgtgcggttatcccatctgtcct
aataaactgggcaagatcccaactcaacaatacaaaatttctacgaagaccaataaagtg
tatgacatcacagagcgcaagtgtttttgcagtaatttctgctacaaagcctccaaagca
tttgagctacaaataccaaagacgcctctttgggttcggcaacatgagagtcctcctgaa
attaagttgttgaagcaaggagaacgtgggagctctggtgaggaggtgatgctgtccgag
aggtatctaaaagaagaggacatcgagaaccctgtggctgctcaggacgaggatcttcac
agctctcgtgatcatcctgctggaggcagccacagtgatgtcagtgacggcgaacatgag
caggactttgtctccagcgtggtctcccagcagcagaaaccccgggtacactggggtgac
ctgcccaaactctcagataaggatgataaagggaaacaaaggaagtctgaaacaagaaag
ataaacaccaaagaggggaatgaagaaaagatcgaacctcctcagagtcagaatacagag
gaacagagaagtatgatagaagacgaggaaagaaaagaggcagacgtgcgtaaaactgaa
gttactgatgctgaaaaacccaaagagctgcagacgacacatacggaccaggcggctcca
cgagagagagagttgtctgagctttctagtgtggaagagactacagctaagatgagcgtg
tgcagtttatcggagacggtaactcacagcgttcctcgctcgaaccctccagcagaaagc
aaagaaattcccgccactaatcaaaacagtcacggccagcaagaactcaacatcacgcag
gtgggtatgagcaaaaggggggcggcggggctgcgagatctactgaagaaccacgccgaa
gccaaacctgactctgtacggatgaatctgctcgagtgcctgaaaaacacattgaaggag
tggtgtacggatgagacgttaacgttcctatacggctccgatcactccctgggttctccc
tatgccgaggtaagagaagaagaaggcaaagaggagttggatgaagatgaccttgaggat
gaggtgacagccgacaacaccgaggacaagaagaggccgtcggctgcagctccaaactat
gacacgctgcggagggaaacccaggatctggagctccgggtcagggaattttataagggc
acgtggattctgcctgacgagaaagaggagccaaatagaaagcaggtggcagtccaggaa
agcatcaaggatccggtcctgccgctcgttgactctcatgctcagaacctcatccagaaa
cgaatcacagtggagaagctctccagctgcctcagaaacattgtaggtccgctgcatctc
accatgagtgacatcactaccgacctcaacaacctggtgcggacgttcaggttcaccaac
aaaaacatcatccataaaactccagagtggaccctcatagctgtggtgcttctgcatctg
ttgtcagaagtgtctccattggtgcgagaagccctggagacttcggcatcagcggagtat
ttgaacacgctgatggtggagctgggtctgcaggatcaggaccttctgaacttggtccag
ctgtttaaatccccagcacgttga
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