Oreochromis niloticus (Nile tilapia): 100698488
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Entry
100698488 CDS
T06104
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100698488 (scaf4)
03041 Spliceosome [BR:
onl03041
]
100698488 (scaf4)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100698488 (scaf4)
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100698488 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100698488
NCBI-ProteinID:
XP_003446932
Ensembl:
ENSONIG00000004687
UniProt:
I3JAL4
LinkDB
All DBs
Position
LG10:complement(15133580..15146698)
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AA seq
1151 aa
AA seq
DB search
MDAVNAFNHELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSGSGAAPNTGADEPGSPPPPAKEPVTVVTANSTMIPAAQLHNS
DAFAAVAQLFQSSQGQQLQQMLQNFQQQPVKPETNTQPPPQIIPPQAPNVSAGLGMVAPQ
PPLPSQPAQLTQPAQQKTAFDKKLLDRFDYDDEPEVGEETKKDEISSQPPFMQQPPAFPQ
HMDHFKPQINIQQDISQQVHLPPNGQLQVHGLPPGQSFPAAMPPMGHVLPGMSLSGSSGP
PGFPGVYHHQNAAQQQQDLPMDIDHSSMRDGRHGRRSHSGSRSPKRRRSRSNSRTRRSRH
RRSRSRSRDRRHHSPRSRSQERREREKERERRQKGLPPIKSETVSICSTTLWVGQLDKRT
QQQDVACLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGTFKVNQKAIKIAW
ALNKGIKADYKQYWDVELGVTYVPWSKVREDQLEELKEGGMLDVDTLSPEWSGTRKALDH
PEELTHNGRSEQQQPEETQAVPVPAPTAPPTQVPPMQQPMVGVGSLQPPVFPGPIGMPPP
SFPPGVPPPPFIRPGFNPMQMPPGFPLPGAMPLGPPPPSKTGVEDSPLDPAGLGNRKNDE
ALEAPNIFNNQMGSMVNQVGLPPGAPPGGPLGAPPGGHLGVPPGGPPGAPSGGPPGAPLV
GPPAGHPGSIPPPSGGLLGARPGLIPLQRPPVPPPTHMQRFPPPHGSRPPHPGMPPMPPQ
MMPRGPHPQMMQHHEPPPPKGAFGMPPPHNLRAPFPHGHGPPPQGPPPFTRPGGPRSLEG
PEEMDSRPFRGDRPGFRDRELERDRDWDRDRERDRERGFGGGRRPFGDGGRGAGGDKMDG
RDRLGGWQEDGGDHRGGGWERDRDRDRDRDRDRDRERDRDRDRDRRDWRERRSSLDSDRE
RARGEDGDRERARGEGTERGSRERGRGAEAKGDRPRRSERRERTTRWDKDDRLAELENMD
RFRTPNSTEQPCVTPEVTKETSKEPGVEASEKKPESELIAPPPEGTASTGDAAPSEPAQS
EPTETNEEAAS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcctttaaccacgagttattctcattgatggactccaaaccacca
atatctcgggcaaagatgatctccatcaccaaatctgccatcaaagcaatgaaactttac
aaacatgtggtccagattgtggaaaagtttataaaaaagtgtaagcctgagtataaggta
gcaggcttatatgtggtggattccattgttaggcagtccagacaccagtttggacctgac
aaggatgtgtttggaccaaggttcaccaaaaacattacaggaacttttgagaacctctgc
ctttgccccgtggaagacaggagtaagattgtgcgggtgttgaacctgtggcagaaaaat
ggggtgttcaagatagaagttattcagcccctcttggacatggcagcgggctctggcagt
ggtgctgcacccaacacaggcgcagatgagccaggttctcctccacctccagccaaagag
ccagttacagtggtaacggcaaactccaccatgatacctgctgctcagctgcacaactct
gatgcctttgctgccgtggcacagctcttccagtcctcacagggtcagcagctccaacag
atgctccagaactttcagcagcagccagtgaagccagagaccaacacccagcctccaccc
cagattattcccccacaggccccaaatgtttctgctggactgggcatggtcgcgccacaa
cctccccttccctcccagcccgcccaactaacccagcctgcccagcagaagacagccttt
gacaagaaattgctggaccggtttgattatgatgatgaaccagaagttggagaagaaaca
aagaaggatgagatctcctctcagcccccctttatgcagcagcctccagcctttccacag
cacatggatcactttaaaccacagattaatatacaacaggacatctcacagcaggttcat
cttcctcctaatgggcagctccaggtccacggtttaccgccaggacagagctttcctgct
gcgatgcctcctatgggccatgtgctgccagggatgtccctctctggttcttctgggcct
ccaggcttccctggggtttaccatcaccagaatgcagcccagcaacaacaggatttgcca
atggatatagaccattcatccatgagagatggcagacatggccgaagatcacactcaggc
tccagatctccaaagcgaaggagatcacggtccaattctcgtacacgtcgatccaggcac
aggcgatcccgctcacgctccagggatcggcgtcatcactcaccgcgctcacgctcgcag
gagcgcagggagagagagaaggagagagagagacggcagaaaggtcttccaccaattaag
agcgagacagtcagcatttgcagcactactctctgggtaggccagctggacaagagaaca
cagcagcaagatgtcgcctgtttacttgaggagtttgggcagatagagtccatcaatatg
atccctccacgtggctgtgcttatattgtcatgatacacaggcaagatgccttcagggct
ctacagaagctcagcaggggaacattcaaagttaaccagaaagccattaagatcgcttgg
gctttgaacaagggcataaaggctgactataagcagtactgggatgtggagcttggtgtc
acgtacgtaccttggtctaaagtcagagaggaccagttagaggagcttaaagaaggagga
atgctcgatgtggacactttatcaccagagtggagtggcacgaggaaggctctcgaccac
ccagaggaactcactcacaatggccgttcagagcaacagcagcctgaggagacgcaagct
gtacctgtacccgccccaactgctcctcctacacaggtccctccaatgcagcagccaatg
gttggtgtgggttctctccaacctcctgtctttcctgggcctataggcatgcctccacct
tcattccctccaggtgtcccgccgcctcctttcatcagacctggcttcaaccccatgcaa
atgcctccaggttttcctctccccggtgctatgcctcttggtccccctcctccttctaaa
actggagttgaggactcccctctagacccagcaggtctgggaaaccggaaaaatgatgag
gcccttgaggctcccaacatctttaataaccagatgggatctatggtcaaccaggtaggc
ttgcctccaggtgctcctccaggtggacctctgggtgctcctccaggcggacatctaggc
gttcctccaggtggacctccaggtgctccttcaggtggacctccaggtgctcctctggtg
gggcccccagccggccatcccggcagcatcccacccccctcaggtggtcttctaggggca
cggcctggtttgattcccctccagcgtcctcctgttcccccaccaacacacatgcaacgt
ttcccaccaccccatggctcaaggccacctcaccccggcatgccccccatgcccccacag
atgatgcccagggggccacaccctcaaatgatgcagcaccatgagccacctccacctaaa
ggagcctttgggatgccccctccgcacaatttaagggctcctttccctcatgggcatggc
cctcctcctcagggtccacctccttttacccgaccaggcggtcctcggagtctagagggg
ccagaagaaatggatagcagaccattcaggggagacaggcctggtttcagggacagagag
ctagagagggacagagactgggatcgagatagggaaagagacagggaaagaggttttgga
ggtggcaggcgtccatttggcgatggagggagaggagcaggtggtgataaaatggatggt
agggacaggcttggaggatggcaggaagatggaggtgatcaccggggtggaggatgggag
agagacagagaccgagatcgtgacagagatcgcgaccgggatcgagaacgggatcgggac
agagacagagacagacgggactggagggagaggcgaagcagcctcgatagtgacagggaa
cgtgccaggggcgaggatggagatagggagcgagcaaggggggagggaacagaaagagga
agtcgtgagagaggcagaggagccgaggcaaaaggagacagaccaaggcggtcagaacgg
cgtgagaggaccacacgctgggacaaagatgaccgtttagccgaactggaaaacatggac
agatttcggacccctaacagtacagagcaaccttgcgtgacccctgaggttaccaaggaa
accagtaaggagccaggtgtggaagcttctgaaaagaagccagaatcagaacttatagct
ccgcctccagagggaactgcttctacaggagacgcggcaccctctgagccggctcaaagt
gagcccacagaaacaaacgaggaggcagcatcatag
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integrated database retrieval system
