Oreochromis niloticus (Nile tilapia): 100698575
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Entry
100698575 CDS
T06104
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100698575
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100698575
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100698575
NCBI-ProteinID:
XP_005467513
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Position
LG2:complement(19776101..19833523)
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AA seq
300 aa
AA seq
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MYNMMETELKTPLPQSNSGSAPGAKNNSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDSEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGTNPVNNAVSVGQRMDGYAHMNGWTNSAYSLMPDQLPYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagctcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacaacagtgccagcgaccaggagcgggtaaagcggccgatgaac
gccttcatggtctggtcccggggtcagcggagaaagatggctcaagaaaaccctaaaatg
cacaactctgaaatcagcaagcgcctcggtgctgactggaaacttctgaccgacagtgaa
aagaggccattcatcgacgaggccaagcgtttacgggctatgcacatgaaggagcatccg
gattataaataccgtccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ttgcccgggggactgttggcgccaggaaccaaccccgtcaacaacgctgtgtcagtgggg
cagcgaatggacggatacgcgcacatgaacgggtggacaaacagtgcgtactccctcatg
ccggaccagctgccctaccctcagcatcacagcatgaacagcccacagattcagcagatg
caccggtacgagatggcaggcctgcagtacccgatgatgtcttcggcgcagacctacatg
aacgcagcttccacatacagcatgtctccagcgtacacgcagcagaccaccagcgccatg
ggactgagctccatggcgtcagtgtgcaagaccgagccgagctcaccaccgccggccatc
acgtcccactctcagagggcgtgtttgggggacctgagggatatgataagcatgtacctg
cctcccggcggggatagcgcagagcattcatccctgcagagcagccggttacacagcgtc
catccgcactatcagaccgcggggactggcgttaatggaacgctacctctcacccacatc
tga
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