Oreochromis niloticus (Nile tilapia): 100698699
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Entry
100698699 CDS
T06104
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100698699 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100698699 (dhx36)
03012 Translation factors [BR:
onl03012
]
100698699 (dhx36)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100698699 (dhx36)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100698699 (dhx36)
Translation factors [BR:
onl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100698699 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
DUF7428
Motif
Other DBs
NCBI-GeneID:
100698699
NCBI-ProteinID:
XP_003454864
Ensembl:
ENSONIG00000003546
UniProt:
I3J6H4
LinkDB
All DBs
Position
LG14:complement(24541233..24566729)
Genome browser
AA seq
1064 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSRERWERGGGGGSRGNSSEFDPDRGGGGQRDRPPPHL
KGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQLGLERGCRDER
ASTSDSWQTAARDSAHCYFDGDLPEEEKTKTEVKWEEEEGSSGQKKAAGKSQSHSTTAVK
DEPPDKWDEEDQEEEVAKPVIKDKDLEFLHQEVVRDRSLDDYLKRDLQSKKSDAKYKEML
KFREKLPSYGKKEELVTLINSNRVLVVSGETGCGKTTQVTQFILDDYINRGMGSMCRVVC
TQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRS
DPLLSSISHLVLDEIHERNLQSDVLLIIVKDLLNLRDDLKIILMSATLNAEKFSQYFDNC
PMIHIPGLTFPVEEFLLEDIIEMTRYRPQNQDRRPSWKRGFWQGRNSRPEKEEKEAEYKE
SWPCYARTLQGRYSDTTIEALEILDRDEKIDLDLILALIRYIVLNEEEGAILVFLPGWDN
ISTLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITI
DDVVYVIDGGKIKETNFDTSNNISTMMAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRA
SLLDAYQLPEIMRTPLEELCLQIKILKLGSIGRFLEKALDRPTEQAVSLAIKNLTELNAL
DQRENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKM
ADMRRKVLSKNSKSDHLTIVNAFQGWEDAKQRGGRYEREFCWDNFLSANTLQMLQNMKGQ
FAEHLMHAGFVSSKDPKDPKSNVNSGNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGVKVY
TQADGKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQ
KDEDQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLQDKICNPAPVDWQNRQSKDCAVI
TAIIDLITTQEKPTGSNRGYGRTWASAPRGEHVYFNDEDDDDDD
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagctatggatatggaggtggaggaggaagaagaggtagaagaggaggtcgcgggcac
agagatggcagcagagaaagatgggaaaggggaggtggaggaggctcgagaggaaacagt
tccgaatttgacccggatcggggaggaggtggacaaagagaccgtcctcctccacacctg
aagggccgtgagattggactgtggtacgcaagatatggagccgttaggaggaagcaagct
gaccggagatcgcgggcagtggtccagatggatgaggcaagagagcaacacattaccaag
ctgcttaactctgtccagaatgaccaacttggcctagaaaggggctgcagggatgaaaga
gcctcgacctctgacagctggcaaacagctgccagggatagtgcccactgttactttgat
ggggatttgcctgaagaggaaaaaacgaagactgaggtcaaatgggaggaagaagaaggt
agttctggccagaagaaagcagctggcaaatcacaaagtcactctacaacagcggttaaa
gatgagccgccagataaatgggatgaagaagatcaggaagaggaggtggcgaaaccagtt
attaaggataaggatctggagttcttacatcaggaagtagtccgagacaggtccctggat
gactacttgaagagagatctgcagagtaagaaatcagatgcaaagtacaaagaaatgctg
aaattcagggaaaaactaccatcttatgggaaaaaagaggagctggtaacgctgatcaat
tctaaccgtgtcctagtggtgagtggggaaacaggatgtggcaaaaccactcaggttact
cagttcatcctagatgactatatcaacagaggcatgggctcaatgtgccgtgtggtctgc
acacagcctcgacgcatcagtgccatctcggttgcagagcgtgtagcggcagagagggca
gaaagtgttgggaatgggaattcatgtggttaccaaatccgcctgcagagccggttacca
aggagacaaggttcgatcctgtactgtacaacaggcattattcttcagtggcttcgctca
gacccattgttgtccagtatcagtcacctggtgctggacgaaatccatgagagaaacctg
caatcagacgttttgctcatcattgtaaaggacttgctcaacctccgagatgaccttaag
atcattctcatgagtgccacactcaacgcagagaagttttcccaatactttgacaactgc
ccaatgatccacattcctggtttgacgttcccagtggaggagttcctacttgaggacatt
atagagatgaccaggtatcggccccagaatcaggaccgtcgcccctcatggaagagaggt
ttttggcaggggcgaaactccagacctgagaaagaggagaaagaggctgaatacaaggaa
agctggccatgttacgcacgaacactacagggcaggtactctgacacaaccattgaggct
ctcgagatattagacagagatgagaagattgatctggacctaattctggcactaattcgt
tatattgtgctcaatgaggaggaaggagcaatcttggtgttcttgcctggttgggacaac
atcagtactctcaacgaccttctcatggctcagcaaatgttccgatcagaccggtttgtt
atcatccctttgcactccctcatgccgaccgttaatcagacacaggtttttaaaaggcct
cctcctggagttagaaagattgtgattgctaccaatatagctgagaccagcatcaccatc
gatgatgttgtttatgtgatagatggaggcaaaattaaggagaccaactttgacaccagc
aataacatcagcaccatgatggctgagtgggttagcttggccaatgccaaacagaggaaa
ggacgtgctggcagagtgtgtccggggaaatgctatcacctgtacaacggtctgagggcc
agcctgttggatgcctatcaattacctgaaattatgaggacaccactggaggagctgtgc
ttgcagatcaagatattgaagcttgggtctataggtcgattcctggagaaagccttggac
cgtcccactgaacaggctgtcagcctcgccatcaagaatctcacagagctgaacgccctg
gaccaaagagagaatctgacagcattggggttccacctggctcggctgcctgtggaacct
cacattggcaagctcatcctgtttggagctctgttgggctgccttgaccctgtactcact
attgctgcttccctcagcttcaaagacccttttttcatacccctgggtaaagagaagatg
gcagacatgaggcggaaggttctctctaaaaactcaaagagtgaccacctcactattgtc
aatgctttccagggctgggaggatgcaaagcagcgtggaggcaggtatgaaagggaattc
tgctgggacaacttcctgtctgccaacacactccagatgctgcaaaacatgaagggtcag
tttgccgaacatctcatgcatgcaggctttgtcagcagcaaggatcccaaagaccccaaa
tctaatgtcaactcgggcaatgaaaaattaatcaaggcagtgattgtagccggtctgtac
cctaaggtggccatgatcagaccatctcacagcaaaaagaggccaggtgtcaaagtgtac
actcaggctgacggaaaagtgtgtatccacccaaaatctgtcaatgccgaagagacggaa
ttcaactatacttggcttatttatcacctaaagatgagaacaagtagcatcttcctgtac
gactgcaccgaggtgtcaccattctcactgctgttctttggaggagacatcaccatccaa
aaagacgaggaccaggaaaccatcgcagtggaccagtggattgtctttagatcccctgca
cgcattgctcaccttgttaagagtttaaagaaagagctggattctctgctgcaggacaaa
atttgtaatcctgctcctgtagactggcaaaaccgtcaatccaaagactgtgctgtgatc
acagccatcatagacctcatcacgacccaggagaagcccacaggcagcaataggggctat
ggcagaacgtgggcgtctgcaccaagaggagagcacgtttacttcaatgacgaagatgat
gacgatgatgattaa
DBGET
integrated database retrieval system
