Oreochromis niloticus (Nile tilapia): 100698710
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Entry
100698710 CDS
T06104
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100698710 (supt6h)
03036 Chromosome and associated proteins [BR:
onl03036
]
100698710 (supt6h)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100698710 (supt6h)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100698710 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
100698710
NCBI-ProteinID:
XP_005462377
Ensembl:
ENSONIG00000005512
LinkDB
All DBs
Position
LG10:complement(17369785..17387659)
Genome browser
AA seq
1748 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKNQRFMEEDADEEEEEDNLEDQDEKGNLRGFIDDGE
EVEEEEEAEKSGSGGGSDSEEEVRRRHKKKRSYDDYLDDDDLDLIEENLGVKVKRRKKKY
DRVKTLDDDEDDDEKDLIADEIFYPDGEGELEEGEAVDEPLQQPDDDEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEG
WDRPKKQTKRRLGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADP
DKPLADGIRPLDTTDMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKANKKRLKKI
KEVSEDGDEEELEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKVNIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLTIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELK
SKLIAEAKESIIRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDENQGKGIRVLGVAYAPSR
DTPVFCALINGEGEVMDFLRLPYFMKRRNAFREDEREKKASDIENLKRFLSGKKPHVVAV
AGENRDAQMIMEDIKRTIGELEQESSLPAVGVELVDNELATLYMNSKKSETDFRDYPPLL
RQAVSIARKIQDPLVEYAQVCSTDEDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVG
VDVNRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEVF
NMLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKRVI
AHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGNREKMEELLIRT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRW
FKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQGQNPNTTPAQWGSSQYGYGGSTGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPSQ
QALGTPQYPGSTPQSSHSHAHAHPHGSHMSHHGHHGHHSSHHGHSSGTPSSSTSSRGRTP
QQQPKPSGSNSSAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAGDAT
PLLDEMDR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttattgaaagtgaggcagaagagtcggaggaggagtttgaggagaaggac
ttaaaacctaagaagaaccagagatttatggaagaagatgcagatgaagaggaagaagag
gataacctagaagaccaggatgagaaagggaatttacgtggcttcattgacgatggagaa
gaggtagaagaggaggaagaagcagaaaaaagtggaagtggaggggggagtgattcagag
gaggaagtgaggcgccgacataaaaaaaagcgcagctatgatgactacctggatgatgac
gaccttgacctaattgaggaaaacctgggtgtcaaagtgaaaaggaggaagaagaaatat
gaccgtgtaaaaacactggatgatgatgaagatgatgacgagaaggacttgatcgcagat
gagatcttttatccggatggtgagggggagctggaggaaggcgaggctgttgatgaacct
ctgcaacagcctgatgatgacgaagaaggagaggatgaagaatcagatatcgatgacttc
attgtggatgatgatggccagcccatcaccaaaaagaggggcaagaagttctcaggatac
actgatgcagcgctccaggaggctcaggagattttcggtggcgactttgactttgctgac
tttgatgctgatgcctatgaccagggtgaggaggaggaagaggatcaagatgaagagggc
tgggaccgacccaagaagcaaactaagaggaggctggggaggaaaagcatttttgagatc
tacgagccaagtgagctcgaaagtagtcacatgactgaccaggacaatgagatccgctcc
acagacatgcctgagcggttccagctgcgagctattcctgtcaaacctgctgaggatgat
gagctggaagaggaagcagaatggatcttcagacatgggttttccactcttacaatctca
atgcaggagagcacagattacctagacaggggcacaaccacaaacttcagcagaaaaggt
cccagcacaattgccaagatcaaagaggccctcaacttcatgaggaatcaacagtttgag
gttccttttatagctttctacagaaaagaatatgttgaaccagagctcaatatcaatgac
ctgtggaaagtgtggcagtgggatgaaaagtggactcagctgaagacccggaagcagaac
ctgacgcgtctgtttcagaagatgcagtcctatcagtttgagcagatctctgctgaccct
gacaaacctttggctgatggtattcgtcctctggacactactgacatggagaggctgaag
gatgtacagactcttgaagagctgggtgatgtctacaatcactttttgctctactacgga
cgagacatccccaagatgcagaacgctgccaaagccaacaagaagaggctcaagaagatc
aaagaagtgtcagaggatggagatgaggaggaattagaggtagaagaagaagaagagcag
aaaggacctgatctcaagttggcatcccgtagggatatgtacagcatctgccagagcgtg
ggacttgatggcttggctaaaaagtttggtttaactccagagcaatttggagaaaatctg
agggacagttaccaacgtcacgagacagagcagttccctgctgagccagtagagctggcc
aaagattatgtttgcagtcagttctctactccagagacagtgctggagggaactaggtac
atggtagccatgcagattgctcgggaacctctggtcagacatgttctccgacagactttt
caggagagagccaaggttaacatcaaacctacaaaaaagggcaaaaaggaggtagacgaa
gctcactttgcctactctttcaagtatcttaagaacaagcctgtaaaagaactgaatggg
gatcagttcttgaagatgtgccttgcagaggatgaggggctacttaccattgatatctgc
atagaccttataggagttaaagggtatgcaggggaccagacgtactttgacgagatcaaa
cagttctactacagggacgagttcagtcaccaggtgcaggagtggaacaggcagcgaact
ttagccatagaaagagctctcaatcagttcctctaccctcagatggccaaggaacttaag
agcaaactgatcgctgaggccaaagagagcattatcaggtcctgctgtcgccgactgtat
aactggctgaaagtggctccgtacaggccagatcagcaggttgaggaagatgatgatctg
atggatgagaatcagggaaaaggcatccgagtgcttggtgtagcctatgcgcccagcaga
gatactccagtattctgtgctctgatcaacggggagggagaggtgatggactttcttcgt
ctgccctacttcatgaagaggaggaacgcctttagggaggatgagagagagaagaaggcc
agtgacattgaaaatctcaagaggtttctgtcaggcaagaaacctcatgtagtagctgtt
gctggagaaaaccgagatgcccaaatgataatggaggacatcaagagaactatcggcgag
cttgagcaggagtcctctctgcctgctgtaggagtggaacttgttgacaatgaactggcc
acgctgtacatgaacagcaagaagtctgagactgattttagggattatcctccgttgctg
cgacaggctgtttcgatagccaggaagatccaggatcccctggtggagtatgctcaggtc
tgcagcactgatgaggatattctctgcctcaaactacacccgctgcaggaacatgtggtg
aaggaggatttgctcaatgctctttactgtgagttcatcaaccgtgttaatgaggttgga
gtggatgtgaacagagccatcgcacaccctcacactcagagcctggttcagtatgtgtgt
ggtttgggaccaaggaagggttcacatcttctcaagattctgaagcagaacaatactcgt
ttggaaaacagaacacagctcgtcacaatgtgtcacatggggcccaaggtttttatcaac
tgtgctggtttcatcaaaattgacacggcttcgcttggggacagtacggactcctacatc
gaggttctggatggttctcgtgtccaccctgagacatacgagtgggctcgcaagatggct
gtagacgcgctcgagtatgatgagtcggcagaagatgccaatccagccggagctctggag
gagatcttggaaaatcccgaacgtctcaaagatctggacttggatgcatttgctgaagag
cttgagagacagggttacggaaacaaaggaatcactctgtatgacatccgtgctgagctg
agctgtaggtataaagacttacgagttgcgtacagagtccctaatactgaggaggttttc
aacatgctcaccaaggagactccagagaccttttatattggtaagctgatcactagtgta
gtaactggcatcgctcaccggcgcccccagggagagagctatgaccaggccatccgtaat
gatgctacaggcctttggcagtgccccttctgccagcaggacaatttccctgaactgagc
gaggtgtggaaccactttgacagtgggtcatgtccaggtcaggccattggagtacggtcc
agattagataatggtgttcagggtttcattcccaccaagtttctcagtgacaaagtggtc
aaacaccctgaggagagggtcaaggtgggcatgacagttcactgtcgaatcatgaaaatc
gacattgagaaattcagcgttgacctcacgtgtcgcacctccgatctaatggacaaggcc
aacgaatggaagctccctaaggacagctactatgactttgacacagagtctgaagaccaa
aagcaggaggaggagctcaaaaagaaacaacagcgaacaccatatataaagcgtgtgatt
gcccaccccaacttccacaacatcagtttcaaccaggcagagaagatgatggagaccctg
gatcagggtgacttaattattaggcccagtagcaagggagaaaaccacctcacagtcacc
tggaaggtggccgatggcatctaccagcatgttgatgtgagagaagaaggcaaagagaat
gctttcagcttagggcacactctctggatcaacaatgaggagtttgaagatctggatgaa
attactgctcggtacattcagccaatggcgtcatttgcccgggatctgctggggcataaa
tacttccaggagtgcaacgggggaaacagggagaaaatggaggagttgctgatccggaca
aagagggagaagcccaccttcattccttactttatttcggcatgcaaagatctaccagga
aaattcatccttggctaccaaccacgtggaaaaccacggattgagtatgtgactattacc
ccagatggcttccgctaccgttcacagatttttcctacggtgaatgggctattccggtgg
tttaaggaccattatcaggagcctgtgccaggcatcactcccagtaatagcagccgaaca
aggacgcctgcctccctgaacgctaccccagccaatattaacattgcagacttgacacga
gctgtcaacgccctcccacgcaacatgacatctcagatgttcaatgccatcgccgcagtc
acgggccagggtcagaaccccaacaccacacctgcacagtggggctccagccagtacggc
tacggtggcagcacaggaggtggagggagctcgtctgcctatcatgtgtttgccacacct
cagcaacctatggcgacacccatgatgacgcccagctactcgtacaccacaccgagccag
caagccttgggcacgccgcaatacccaggctccaccccccagtcttcacattctcatgcc
cacgcccacccacatggaagccacatgtcacatcatggccatcatggccatcacagcagt
caccacggccactcatcgggcacgccgtcatcctccacctcatcccgaggacggacgcca
cagcagcagccaaagccaagcggcagcaactcctccgcggtggactggggcaagatggcc
gagcagtggctgaaggaaaaggaagcagagggccgaaagaaagctcagaggatgacgcca
cgaccgtcacccagccctatgatcgagagcacaccaatgtcaatcgccggagacgccacg
cccctgctggatgaaatggaccgatag
DBGET
integrated database retrieval system
