Oreochromis niloticus (Nile tilapia): 100698954
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Entry
100698954 CDS
T06104
Symbol
col28a1
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100698954 (col28a1)
Peptidases and inhibitors [BR:
onl01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
100698954 (col28a1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
DDE_3
Motif
Other DBs
NCBI-GeneID:
100698954
NCBI-ProteinID:
XP_025767309
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Position
LG11:33241657..33266501
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AA seq
1270 aa
AA seq
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MLLKGNLSRGVGVCLLLLALLHKATGQRRKTGRRNNYRLQDEGRNGLTCSLEVAFILDSS
ESATISLFEKQKTFVLSFSTRLAMLQVPGWTMKVRMAALQYSSTVSIEHRFSAWKDLDYF
HGQVSTMNYIGHGTYTTYAITNASQLLVHETSKDSVRVAVLMTDGVDHPRNPDVIAAAVE
AKGHGIKFFAVGLSDIAQQNIAKLRAIASTPAQQFVQSMLDSQLEEKLLKEMVAVAYEGC
PQAQVCLCERGERGPPGSPGRKGDPGFRGPAGQKGARGEPGLNGTPGSDGPPGRTGYKGN
KGDRGDCGAPGEKGDTGPEGPPGPQGPKGAQGAPGPPGEVGPEGPSGSKGDRGPSGAPGQ
PGDIGIGFPGAKGDKGNQGRPGPAGPPGIGEPGLLGPQGSPGTQGNPGPPGEGFPGPKHE
NDPMYASSAIKAYLNRKAHSGTPGIMDWPPQSPDLKMIVAVWDHLYRAWNKVQPATKEEF
GKRNRLIYILKNVQISGDRGYEGPKGSRGLPGIGIKGDKGNFGPPGNQGPVGAPGPGLQG
EKGDQGPAGPPGPKGAPGVGIAGPKGDQGLSGEPGLPGERGVGEPGPKGDPGAEGLSGIP
GQPGEDGVPGPKGDLGLPGPRGADGAPGKGVPGEKGDKGDRGSRGQPGAVGPVGPMGPKG
QPGIIGLPGPAGLTGRGIAGAKGEPGPQGPPGAVGDPGIGSPGSKGDRGPQGPPGPPGLK
GEGFAGPPGLPGPPGLMGETGPDGIGLPGTKGERGLPGSPGPAGPPGIGLPGPKGSAGQI
GPPGPQGLPGEGLQGQKGESGFQGMPGPRGPPGQGLQGDKGDRGFRGEKGNKGDRGEPGE
TGVIGPLGKTGQKGEPGLTRDEIIKIVKSICSCAVTCRQTPLELVFVIDSSESVGPENFN
VIKDFVNALIDRASVSRDITRVGVVLYSHINMVVVSLRQEATRDEIKSAVHSMTYLGEGT
FTGSAIQQANQVFKAARPGVRKVSIIITDGQADKRDSISLESAVTEAQRSNIEMFVIGVV
NKSDPLYKEFKKELNFMATDPDSDHLYLIDEFTTLAALEKKLLSHICENGERRLFSSIPS
SGLPPGIPEVSSNAREPPYRTDTDTPTFTGDFRRVQKMPGPPGSDPDGESTSRKRPATNS
RTTLETQRLPFFDREPFRPVTEFLPQFDVNNPTHDVVMTGAIGPAGPTLKTPPEEKIPPG
PTLPPLPSDTYLSAERCTQTLDPGPCRDYVVKWYYDPTANSCAQFWFGGCLGNENKFDTE
KSCKEACVKA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaagggaaacctgagcagaggagtcggggtctgccttctgctgctggctctc
ctacacaaggccacaggccagaggagaaagacagggcgcaggaacaactacaggctgcaa
gatgagggaagaaatggtctgacatgttcactggaagtggcgttcatcctggacagctct
gagagcgcaaccatatcactgtttgagaaacagaagaccttcgtgttgagcttcagcacc
cggctcgccatgctccaggtacccggctggacgatgaaggtgcggatggctgcactgcag
tacagcagcactgtgtccatagagcacagattctcagcctggaaagacctggactatttt
cacggtcaagtcagcaccatgaactacatcggtcacggcacctataccacctacgccatc
accaacgcctcacagctgctggtgcatgagacctcaaaggacagcgtgagggtggcggtg
ctaatgacagatggagtcgatcatccccgtaaccctgatgtgattgcagctgctgtggag
gccaagggtcatggcataaagttctttgctgttgggctatcagatattgcccagcagaat
attgccaagctccgggccatcgccagcacacctgctcagcagtttgtccaaagtatgctc
gactctcagctggaagagaagctgctcaaagagatggttgcagttgcatatgaagggtgt
ccacaggcccaagtatgtctgtgtgaaagaggagagagaggtcctccaggaagtcctggt
agaaaaggagacccaggcttcagagggccagctggtcaaaaaggagcgaggggggagcct
gggctgaatggcacacctggaagtgatggtccaccgggccgcacaggttacaaaggcaac
aagggggacagaggagactgtggcgctcctggggaaaagggtgacactggcccagagggt
cctccgggcccacaaggaccaaaaggagcacagggagcaccaggaccaccaggggaagtg
ggtcctgaaggcccatcgggttctaaaggagacagaggacccagcggtgcacctggacaa
ccaggagacattggtatcggattcccaggagccaagggtgacaagggtaatcagggaaga
ccaggtccagcaggtcctccggggataggtgaaccaggactcctgggaccccaaggatca
cctggaacacaaggaaatcctggacctcctggagaggggtttccaggaccaaagcatgag
aatgatcccatgtatgcatccagtgcaataaaagcatatctgaatagaaaagcacacagt
ggaacgcctggaatcatggattggcctcctcaaagcccagacctcaaaatgattgtagca
gtgtgggatcatctctacagagcatggaacaaagtgcagccagcaaccaaagaagagttt
gggaaaagaaacagactaatttatattttaaaaaatgtacagatcagtggtgatcgagga
tatgaaggtccaaaaggaagtcgagggcttcctggtattgggatcaaaggtgacaagggc
aattttgggccaccaggaaatcaaggtccagttggtgctcctggtccaggacttcaagga
gaaaagggagatcagggtccagctgggcctccaggacccaaaggagctccaggtgttgga
atagcaggaccaaagggggatcagggcctctcaggtgagccaggactaccaggtgagcga
ggtgttggagaaccagggcccaaaggtgaccctggagctgaggggttatcaggtatacct
ggtcagccaggagaggatggagtcccaggaccaaagggggaccttgggttaccggggccc
cggggagctgatggagctcctggtaaaggtgtcccaggagagaagggagacaaaggggac
cgggggtccagaggccagccaggtgcagtcggtcctgtggggccaatgggcccaaagggc
caaccaggaattatcgggctaccaggtccagctggacttactggcaggggtatagcgggg
gccaagggagaaccaggtccacaaggtccacccggagctgtgggagacccgggaattggt
tcacctggatccaagggtgacagagggccacaggggccccctgggccacctggactaaaa
ggagaaggtttcgctggccccccaggacttcctgggcctcctggcctgatgggagagact
ggaccagatgggattggtttacctggaacaaagggagaaagaggcttgcctgggtctcct
ggacctgctgggccaccaggaatcgggttacctggtccaaagggttcagctggccaaata
ggaccacctggtccacaggggttacctggagaagggttacaaggacaaaagggcgagtct
ggatttcaggggatgcccggccccagaggtcctccaggacaaggtctgcagggcgataag
ggggaccgagggttcagaggtgagaaaggcaataagggagacagaggggaacctggagag
actggcgtcatcggacctctgggcaaaacaggacagaagggggaacctggacttacaagg
gatgaaatcatcaaaatagtaaaatccatctgcagttgtgcagtgacgtgccgccagaca
cccttggagctcgtctttgtgatcgacagctcagagagcgtcggccctgaaaacttcaac
gtgatcaaagactttgtgaacgccctgatcgaccgcgcctcggtcagccgggacatcact
cgtgttggcgtggtcctctacagccacatcaacatggtggtggtcagcctcagacaggaa
gccacccgcgatgagatcaaatctgctgtgcattccatgacctacctgggcgagggcacg
tttacaggcagtgccatccaacaggccaaccaggtgttcaaggcagcccggccaggtgta
aggaaggtgtcgatcatcatcaccgacggacaggccgataagagggactcgatcagtctg
gagagcgccgtgacagaagcccagagaagcaacattgagatgtttgtgatcggagtggtg
aacaaaagcgatccactgtacaaagagttcaagaaggagctcaacttcatggccactgac
cccgacagcgatcacttgtacctgatcgatgaattcacaacacttgcagctctggagaaa
aaacttttgagtcatatctgtgaaaacggagagagacgcttgtttagctccatcccgagc
tcggggcttcctccaggaatcccagaagtctccagcaatgctcgagaaccgccatacagg
acagacacggacacacccactttcactggagacttcaggagagtccagaaaatgcccggc
cctcctggttcagaccccgacggtgagtccacctctagaaagaggccggcgacgaacagt
aggaccaccttagaaactcagaggcttccgttcttcgacagggagcccttcaggccggta
acagagttccttccacagtttgatgtgaacaaccccacacacgatgtggtgatgaccgga
gccatcgggccagctggtcctactctgaagactccgcctgaggagaagataccaccggga
ccaactctgcccccgctgccctctgacacctacctatcagccgagcgctgcacccagacc
ctggatccaggaccgtgtcgggactatgtggtgaagtggtactacgatcccacggcgaat
tcctgtgctcagttctggtttggaggctgcttagggaatgagaacaagtttgatactgag
aagagctgcaaagaagcctgtgtcaaggcctga
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