KEGG   Oreochromis niloticus (Nile tilapia): 100699015
Entry
100699015         CDS       T06104                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    100699015
Spliceosome [BR:onl03041]
 Complex B
  Other components
   Complex B specific factors
    100699015
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_NOL10_N LisH LisH_PAC1 PROPPIN WD_LRWD1 VPS8_N LisH_WDR26 TFIIIC_delta DUF7165 Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 100699015
NCBI-ProteinID: XP_003443420
Ensembl: ENSONIG00000001541
UniProt: I3IZ88
LinkDB
Position
LG2:complement(9828138..9836863)
AA seq 513 aa
MSLEVESADVVRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHVKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEVTFTPD
GHHIISASSDGTVKVWNVKTTECSSTFKPLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatctgcagacgtggtccgtctgattatgcagtacttaaaagag
aacaatctgcaccggacactagctactctgcaggaggagactacagtgtctctgaacaca
gtggacagtatagagagctttgtggcagacatcaacagcggccactgggatactgttcta
caagctatccagtccctcaagctgccagacaagaccttgatagacctttacgaacaggtt
gtgttagagctgattgaactgagagagttgggtgcagctcgttcactgctcagacagacc
gaccccatgatcatgctgaaacagacccagccagagagatacatccacttggagaacctg
ctggctcgctcctactttgatcccagagaggcgtacccagatggcagcagtaaggagaag
cgtcgggcggccatcgctcaggccctggcaggagaggtcagcgtggtgcctccctctcgt
ctcatggctctgctgggacaggctctgaagtggcagcagcatcagggtctcctgcctcct
ggcatgaccatcgacttgttcagaggtaaagctgccgttaaagatgtagaagaggagcgc
tttcccacgcagctcagcagacacgtcaagtttggacagaaatctcacgtggagtgttcc
cgattctcccctgatggtcagtatctggtcactggctctgtggacggtttcatcgaagtc
tggaatttcacaactggcaaaatcaggaaggatctgaaataccaggcccaggataacttc
atgatgatggatgacgccgtgttgtgtatgggcttcagtcgggacacagagatgttggcc
actggagcccaggatggaaagattaaggtttggaagatccagagtggtcaatgtttgagg
aggttcgagcgtgcccacagcaaaggagtaacatgtgtcagcttctgcaaggacagcagc
cagctcctcagtgcctcctttgatcagaccatcagaatccatggactgaagtcgggtaaa
actctaaaggagttccgcggtcactcctcgtttgtcaacgaggtcacattcactccggac
ggccatcacatcatcagcgcgtcctctgatggtacagtaaaggtctggaacgtgaagacc
actgagtgcagcagcaccttcaagcctctgggaacgtcagccggcactgacatcacagtc
aacaacgtcatcctgctgcccaagaacccggagcactttgtcgtgtgcaaccgctccaac
acagtggtcatcatgaacatgcagggacagatcgtgaggagtttcagctccggtaagagg
gaaggtggtgactttgtgtgctgcactctgtcgccccgtggcgagtggatctactgcgtg
ggtgaagactttgtgctctactgcttcagcacagtcaccggcaagctggagagaacactg
acggtccacgagaaggatgttatcggcatcgcccaccacccccaccagaacctcatctcc
acctacagtgaggatggcctgctgaagctctggaaaccttaa

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