Oreochromis niloticus (Nile tilapia): 100699061
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Entry
100699061 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100699061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100699061
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100699061
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100699061
NCBI-ProteinID:
XP_005459101
Ensembl:
ENSONIG00000014397
UniProt:
I3KAF6
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Position
LG5:19792957..19826845
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AA seq
612 aa
AA seq
DB search
MESMPREFLKGNSLEAPGQEKGLMKKTQLLDRGQWASKLEFLLAVAGTLVGLGNLWRFPY
LCYKNGGGAFLIPYVLFLLACGIPMFLLETAMGQFTSQGCITCWRHFCPLFEGIGYATQV
VIAYAAVSYIVIQAWAFFYLFSSFSAEIPWASCRNSWNTESCFEFDKANASSNWTAAANA
TTPATEFWERRVLGISQGIEEIGSLRWDLALCLLLAWIICYFCVWKGVKSTGKVVYFTAT
FPYVMLVVLLARGLTLPGAINGLAFYLYPDPTRLVDPQVWMDAGAQVLFSFGICQGSLTA
LGSYNKYNNDCYKDTFVLCLVNGGSSFVAGFAIFSVLGYMSYEQGLPISEVAASGPGLAF
IAYPRAVAMMPLPQLWAICFFIMVILLGADTQFVSLECLMTSVTDMFPSVFRRAYRRELL
LLCLCSVCFFLGLLLVTEGGLYFLQLFDHYVCSGNNLLLLSVCQSIAIGWIYGADRLYDN
IEDMIGYRPWPLMKHCWLYVTPAVCLGTFVFSIVRYKPLKFNKTYVYPTWAYALGWFLGL
FCVLLVPLWIIFKVTTMKGTIWQNLRQLCVPQSRTHRKAKQPEQCPLNPDNTLTPVASEY
KGRGGAEMEMQV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagagcatgccgagggaatttcttaaaggaaacagcctggaggcacccgggcaagaa
aaaggtctcatgaagaagactcagttgctggaccgcggccagtgggcgagcaagttggag
tttctgctggccgtagcagggacattggtcgggctgggaaacctttggaggttcccctac
ttgtgctacaaaaatgggggaggtgcatttctgattccctacgtcctgtttctgcttgct
tgtggcatcccgatgttcctcctggaaacagccatgggacagttcacatctcagggatgt
atcacgtgctggaggcacttctgccccttgtttgaaggtattggatatgcaacccaggta
gtgattgcatatgctgctgtgtcatacattgtgatccaggcatgggctttcttctacctg
ttttcatccttcagtgctgagattccatgggccagctgcaggaactcctggaacacagag
tcttgttttgaatttgataaagcaaatgcgtcatccaactggacagcagctgcaaacgca
acaacaccagcaacagaattctgggagagaagagtactgggtatatctcaagggattgag
gagattggtagcctgaggtgggacttggccttgtgtctcttactggcatggatcatttgt
tacttctgtgtttggaaaggagtgaaatccactggaaaggtagtttactttacggccact
tttccctacgtgatgttggtggttctgttagctcgtggactcactttaccaggagccata
aacggcttagctttttacctgtatcctgaccccacaaggttggtggaccctcaagtttgg
atggacgcaggtgcacaagttcttttctcctttgggatttgtcaggggagtttgacggct
ctgggcagttacaataagtataacaatgactgttacaaagacacatttgttctgtgtttg
gtgaacggcggatccagttttgttgcagggtttgcaatcttttctgttctggggtatatg
tcctacgaacaaggactgccaatatcagaagtggcagcttctggacctggcttggcattt
attgcctatccgcgcgcggtagccatgatgcccttacctcaattatgggctatatgtttc
ttcatcatggtcatcttgttgggggcagatacacagtttgtgagtttggagtgtttgatg
acctcagtgaccgatatgttccccagtgtgtttcgaagagcttatcgtcgagaattgctg
ctgctctgcctctgctccgtttgcttttttctcggcctcctcctcgtcaccgaggggggc
ttgtatttccttcaactctttgatcattatgtgtgtagtggaaacaatcttctccttctt
tctgtgtgtcagtcgatagcgattggatggatatatggtgctgatcgtctttatgacaac
attgaagacatgataggttatcgtccctggcctctgatgaagcattgttggctttacgtt
acccctgccgtgtgtctaggtacttttgtcttttcaattgtgagatacaagcctctcaag
ttcaacaaaacctacgtctatccgacctgggcgtacgcgttgggctggtttcttggactg
ttttgtgttcttctggttcctctgtggatcatctttaaagttactacaatgaaagggaca
atttggcagaacctcaggcagctttgcgtccctcagagcaggacgcacaggaaagcaaag
cagcccgagcagtgccctttaaacccagacaacactcttactcctgttgccagtgaatac
aagggaagaggtggagctgagatggagatgcaagtctga
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