Oreochromis niloticus (Nile tilapia): 100699181
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Entry
100699181 CDS
T06104
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100699181
04517 IgSF CAM signaling
100699181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100699181
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
L1 family
100699181
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Ig_PDGFR_d4
Fn3_ROS1
BiPBP_C
DUF6724
Motif
Other DBs
NCBI-GeneID:
100699181
NCBI-ProteinID:
XP_005448620
Ensembl:
ENSONIG00000016929
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All DBs
Position
LG20:complement(11546235..11563873)
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AA seq
1179 aa
AA seq
DB search
MGTLVKPALLLLLWQSVGALNVPLEVRQPPTIIKQSMKEHIVDPKGTMVIECEAKGNPHP
IFSWRRNGKYFNVARDSQVSMRRRSGTLDIYARNNPEKYEAEYQCIASNQYGSAYSHKII
LQLYRPPVWPREIVEPVVVSAGLPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGVSGDLYFSNVLFNDSVVDYCCNARFPYKNVIQQKMPVVVKVLTTR
AVVEAAPTWLSPTGSSSSVLVLQGEELLLECIAAGMPTPHITWAKDGEDLQVTSRMKVKN
FNKMIQIPKASFEDAGEYTCTAKNRLGYAEHTITVRVKATPFWLEKPTNLILAPEENGRL
VCRADGAPRPTISWFINGEPIETATPLPNRQVSGETLIFRSVTTENTAVYQCNASNQYGY
LLANAFINVLHATPRILGARNEFIKVTEGSRTFLDCQYFGSPLPELRWSKYGQGNLEGNR
FKTHSNGTLEIKHIKIEDQGTYVCVVSNIAGRDEDQVRVEVKEPILIVTRPQSMKVMRAT
DVRLECGVKADVTTPITTTWLKNKKHLTLGWRISMDESNLVITNVNTGDEGNYTCVIKSE
LEQKSASAHLMVMDRPNPPTNLELSDPYERTVRLSWVPGDSNHSPITGFLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLIPFTYYEFRVIAINEIGASRPSRPSKRFQTSGAPPDIIPK
NLKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEGRPTTAPLNLRVSDIESTQVTLHWDPVTSD
TIMGELKEYKVYYWRDSSQLRWHWVDRGMKSKAFPINGPDPSGVLDDLIPYSNYKMYIVV
ANNRYEGPPSNNIHFSTPEGVPSAPRSFRIQQRHLDSIYVDWGLPAEPNGIITGYSLKYQ
TVNATRGEELRVEELPPNVTSFSIRRYDRYTRYRFSVAARTRLGIGEWHTEESPHYTTEI
YAQDQVDITTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVRDKKDISLELVDDKDQ
EGSFDYRSLERIARVSTLPYPRREEERGLQRGQPSIEAMMKRSDSDDSLVEYGEGGEMPF
NEDGSFIGQYTGTRRDVRELDFGGSLELHSPINTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggacactggtcaaaccagcgctgctgctacttttatggcagagtgttggggcttta
aacgtccctctcgaagtcagacaaccccctactatcataaagcagtcaatgaaagagcac
attgttgaccccaaagggaccatggtaatagagtgtgaagccaaaggaaaccctcatcct
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgtgactctcaggtgtca
atgcgcaggcgctcagggactctggatatctatgcccggaacaatccagaaaagtatgag
gcagagtatcagtgcattgcctccaaccagtatggatctgcatactcccacaagatcata
ctacaattatacagaccccctgtgtggccaagagagattgtggagcctgtggtggtgagt
gctggcttgccacttgtcctctcctgtgaccctccacctggcccacctaaacctgaaaca
tactggatgtccagttgttcatatgcgagacctttcaactggcccattcagacagctttc
cccaccatgcagcctgtgcggcaggaccgcagggtttccatgggagtcagtggagatcta
tatttctctaatgtgttgttcaatgactctgttgttgattactgctgtaatgccagattc
ccatacaagaatgtcattcagcagaagatgcctgtagttgtgaaggtgcttacgactcgt
gcagtggttgaggctgctcccacctggctgtctcccacaggctcatcaagctcagtattg
gtcctgcagggggaggagctgctcctggagtgcattgctgcaggaatgccaactcctcac
attacctgggccaaggatggagaggacttacaagtgacatctcgcatgaaagtgaagaac
ttcaacaaaatgattcaaatcccaaaagcatcttttgaagatgcaggtgaatatacctgc
actgctaaaaataggttaggctacgctgagcacacaataactgtcagggtcaaagcgact
cctttctggttggaaaaacccaccaacctgattttggcaccagaggaaaatggacggttg
gtgtgtcgcgctgatggggctcctcgtcccacaatcagctggttcattaacggtgaaccg
attgaaactgctacaccactgcctaacagacaggtatcaggagaaacgctaatcttccgc
agtgtaactacggaaaacactgctgtctaccaatgcaatgcttcaaatcagtatggctac
ttattggccaatgcatttattaatgtgctacatgcaacgccacgaatccttggggcaaga
aatgaattcatcaaagtgactgagggtagtcgtacctttttagattgccagtactttggt
tctccattgcctgagttgagatggtccaaatatgggcaaggaaatcttgaaggaaatcgt
tttaaaacccacagcaatgggactctggagatcaaacatatcaagatagaagaccaagga
acttacgtgtgtgtagtcagcaacattgcagggagagatgaggatcaagtcagagtagag
gtcaaagaacccatattaattgtcacaagaccacagagtatgaaagtcatgcgtgcaact
gatgtccgcctggagtgtggtgtaaaagcagatgtcacgactcctatcacaaccacttgg
ttgaaaaacaaaaagcatctcactcttggttggagaatctcaatggatgaatcaaatcta
gtgattactaatgtaaacacaggcgatgagggaaattatacatgtgtcatcaagagtgag
cttgaacagaaatctgcctcagcacacctaatggtgatggaccgtccaaatcctcccact
aacttggagttatctgatccatatgaacgtactgtaagactgagctgggttcctggagac
agcaaccacagccccataacagggttcttagtgcagtatgacgacgatgactggttgcct
ggaaagtggagaaatctttcaacgtacccagggaacctgaactctgtcattttgcatctc
ataccttttacctactatgagttcagagtcatcgctattaacgaaattggagctagtcgc
cctagtcgtccatctaagcgttttcagaccagcggtgcacctccagatatcatcccaaag
aatttaaaaggtgtaggtacatggagaaataacatggaaatcagctgggagcctctaacc
tacagagagtggaatggaccccatctaaagtatctggtgtggtggagaaggagagattct
cgagaggagtggaagaatgcaaccactaagtggctaaaatattacatctatgatgcggat
acctttactccttatgagatcaaagtccaggcagtgaatgactttgggctgggaccagag
tctcctgttgtcattggttattctggtgaaggccgcccaacaacagcacccctgaacctg
agagtgtctgacatcgagagcactcaggtgactctacactgggatccagtgacaagcgac
acaattatgggagaactgaaagaatacaaggtctactactggagggacagcagccagctg
agatggcactgggttgacagagggatgaagtccaaagcatttcctatcaatggcccagac
ccctctggggtccttgatgaccttattccctacagcaactacaaaatgtacatagttgtg
gcaaacaatcgatacgaagggccgccaagtaataacatacatttctcaacacctgaagga
gtaccatctgctcctagatccttcaggatccaacagcgacatctggacagtatttatgtt
gactggggcctgccagcagagcccaatggcataattaccgggtattccctcaagtaccag
acagtgaacgccaccaggggagaggagctgcgagttgaagagcttcctcctaatgtgaca
agcttctcaatccgccgatatgaccgatacactcgatacagattttctgtggcagcacga
actcgcctagggataggcgaatggcatacagaggaatcgccccactacaccacagaaatt
tatgctcaggatcaggtggatatcaccactcagggctggttcattgggataatgtgcgct
gtggctctcatcgtgctcatccttctcatcgtgtgtttcatcaagcggagcagaggagga
aaatatccagtacgggataaaaaggacatttcactggagctggtggatgacaaagatcag
gagggatcatttgattatcggtcccttgaaagaatagcacgtgtgtccactctcccctac
cctcgcagagaagaggaacgagggcttcaaagaggtcagccatctattgaggcaatgatg
aagcgatcagacagcgatgacagtctggtggaatatggagaagggggtgagatgccattc
aatgaagatggctcattcattggccagtacacaggaaccaggagagacgtcagggagttg
gactttggtggaagtctggagctgcactcaccaataaataccatctactccctggcttaa
DBGET
integrated database retrieval system