Oreochromis niloticus (Nile tilapia): 100699288
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Entry
100699288 CDS
T06104
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100699288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100699288
03036 Chromosome and associated proteins [BR:
onl03036
]
100699288
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100699288
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100699288
Chromatin remodeling factors
BAF complex
100699288
PBAF complex
100699288
GBAF(ncBAF) complex
100699288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100699288
NCBI-ProteinID:
XP_003444597
Ensembl:
ENSONIG00000014163
UniProt:
A0A669CAP1
LinkDB
All DBs
Position
LG12:complement(35563122..35626658)
Genome browser
AA seq
1592 aa
AA seq
DB search
MSGPSETSGGMSHPGPSPGAGMSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYSMHKPMEGMNDKSMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHMPPAQSGPMMSMDPQGGMSSMSNMGQQV
RGSSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQPQQQP
QPQPQAPSASPYSRPPGMPMAPMGGPQSSPCPAPAMQVHNQSTGPKPWTDGQCPENQTIA
QKQLTPVASGRPSPAPPQASAVPAGPMPGSSGTPQPPGQQGSVMLPIQHKQNRITPIQKP
QGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQ
DVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNS
ILQHAKDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRRKRKKKVDGDGEGTS
AIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDS
EESGSEFEEEEEEEASKGETEEKKIIDPNGDEVTEGAAKNIIESAKQDVDDEYSVPTGQT
SSQSYYGVAHAVIERVEKQSSLLINGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKT
IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVP
QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR
LLLTGTPLQNKLPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGERVDLNEEETILIIR
RLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKK
GKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDR
ILPKLQATNHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGS
QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV
NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDE
TLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYE
EEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSG
REDGGAKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRK
ELPEYYELIRKPVDFKKIKERVRNHKYRNVGDLEKDVMLLCQNAQTFNLEGSQIYEDSIV
LQSVFKSARQKIAKDDDSDDDSDEEEEEDDDDSEAEAKSVRVKIKLSREARGHDKGKKRQ
SRGKAKPVVSDDDSDEDQDDNDQSDKSKSDDE
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccctcagagacatcaggtggtatgtcgcatcctggcccttcacctggggcg
ggtatgtccccagggcccatcttgggccccagccctggaccagatccctcaccgagctct
gttcacagcatgatgggccccagccctggacccggaacacccaatgcacctcatggcatg
cagggccagggacaaagtgattactctcaggacagcatgtattctatgcataagcccatg
gaggggatgaatgacaagtcaatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgaggtctctccatagtggcatggggcctccacagagtcctatggaccagcacagc
caagggtacatgtctccccacccatccccaatgggagtccatgagcacgcttcaagtccc
atgtcaggaggcggaggtggacctacacctccacacatgccacctgcccagtcaggccct
atgatgtcaatggatccccaaggaggcatgtccagcatgtccaacatgggccagcaggtg
agggggtcgtctgcttttagtccagtacagctgcagcagctcagagctcagattctggcc
tacaagattctgggtcgtgggcagccactaccggaaaaccttcagctggctgttcaaggt
aaaaggagcctacccacaatgcaacagcagcagcagcagcagcagccacaacaacagcca
cagccgcagccgcaggcaccaagtgccagtccttacagcaggcctccaggtatgccaatg
gcacctatggggggtccccagtcgagtccctgcccagccccggccatgcaagtacacaat
caaagcacaggacccaagccttggactgatggccagtgtcctgaaaatcaaaccattgca
cagaagcagctcactcctgttgctagtggtcgcccatctcctgcaccacctcaggcctct
gctgtgccagctgggcccatgccaggcagttcggggacccctcagcctcctgggcagcag
gggtccgtaatgctcccgatacagcacaagcagaaccgcatcacgcctatccagaagccc
cagggcttggacccagtgggaatcctgcaggagagagaatacaggctgcaggctcggatt
gcacatcgaatccaggaactggaaagtctgccaggctcgctgcctccggacctcaggact
aaagccacagtggagctcaaggctctgcgtctgctcaacttccagcgacagctgaggcag
gacgtcgtggcctgtatgagacgagacacgaccctggagacggccctcaactcaaaggct
taccggcgtagtaagcggcagacgctgagggaggcacgcatgaccgagaagctggagaag
cagcagaagctcgagcaggaaaagaagcgcaggcagaaacatcaggaatatctcaacagc
atcctccaacatgccaaggacttcaaagagtatcaccgctcagtgtccggtaagatgcag
aagctcaccagagccatcgccacctggcacaccaacacggagcgtgagcagaagaaggag
acggagagaatcgagaaggagaggatgaggagactcatggcagaagacgaggaagggtac
cgaaaactaatcgatcaaaagaaagacaagcgtctggcctacttgctgcagcagacggat
gaatatgtggccaacctcaccaccctggtgtatgaacacaaagctgctcaggctgccaag
gagaagaagaggagacggaagagaaagaagaaggtggatggcgatggtgaaggcacgagc
gcaattggacctgatggagagccaatggatgaaagcagccagatgagtgagctgcctgtc
aaagtgattcagactgagaccgggaaagttttgcagggaactgaggccccaaaatccagc
caactggaggcttggctcgagatgaaccccgggtatgaagtggccccgcggtcagacagc
gaggagagcggctcagagtttgaagaggaggaggaagaggaggcgtccaaaggagagaca
gaggagaagaagataatcgatcccaacggagatgaagtcactgagggagctgccaagaac
atcatcgagtcagccaagcaggatgtggatgatgagtacagtgttcctactggccaaacc
agctcccagtcttactacggcgtggcccacgctgtcattgagagggtggagaagcagtcg
tcactgttgatcaatgggatgctcaaacagtaccagattcaggggctcgagtggatggtg
tccttgtacaacaacaatctcaacggcatcttggctgatgaaatggggctcggcaaaacc
atccaaaccatcgcccttatcacctacctgatggagcacaagaggctcaatggtccctat
ctcatcatcgttcctctctcgaccttgtctaactgggtctatgagcttgacaaatgggca
ccgtctgtggttaaaattgcttacaagggcactcctgctttgcgtcgtgggcttgtgccg
cagctccgcagcgggaagttcaacgtcttgctgaccacctatgaatacatcatcaaagac
aagcatatactggctaagattcgctggaagtacatgatcgttgacgagggtcaccgcatg
aagaaccaccactgtaaactgacacaggtgctgaacacgcactacgtggctccccgtcgg
ctgctcctcaccgggactcctctgcagaacaagctgcccgagctgtgggccctgctcaac
ttcctgctgcccaccatcttcaagtgctgcagcaccttcgagcagtggtttaacgcaccc
tttgccatgacaggagagagggttgacttaaacgaggaggaaactatcttgatcatccgg
cgtctgcacaaagtgctccgcccgtttctcctgcgccggctgaagaaagaggtggagtct
cagctgccagagaaggtggagtacgtcataaagtgtgacatgtctgccatacagaaggtt
ctgtaccgccacatgcagaaaggcatcctcctcactgacggctcagagaaagacaagaag
ggcaaaggtggagcaaagaccttaatgaacaccatcatgcagctgaagaagatctgcaac
catccgtacatgttccagcacattgaagaatcctttgctgagcacttgggctatccaaac
ggcatcatcagtgggcctgatctgtatagagcatctgggaagtttgagctcctagatcgc
atcctaccgaagctccaggccaccaaccacagagtgctgctgttctgccagatgacctct
ctcatgaccatcatggaggactatttcggataccgcaactttcagtacttgcgtcttgat
ggaaccaccaagtccgaggaccgagcagcactgctgaagaaattcaatgaggaaggctct
cagtacttcatcttcctcctgagtaccagagctggtggcctcggcctcaacctgcaggct
gctgacactgtggtcatcttcgacagtgactggaacccacaccaggaccttcaggctcag
gaccgggctcaccgcatcggtcagcagaacgaggtgcgcgtgcttcgtctctgcactgtc
aacagcgtcgaagagaaaatcttggctgctgccaaatacaaactgaacgttgatcagaag
gtcatccaggccggcatgtttgaccagaagtcgtcgagccacgagcgccgcgcctttctc
caggccatcttggagcacgaggagcagaacgaggaggaagatgaggtgcctgatgatgaa
actctgaaccagatgatagcccgcaatgaggatgaatttgagctcttcatgcgcatggac
atggaccggcgcagggaggatgctaggaacccaaagcgtaagcctcgcctaatggaggag
gacgagctgccttcttggatcatcaaagatgacgccgaagtggagcggctcacctacgaa
gaggaggaggagaagatgtttggtcgagggtctcgctgccgtcgggacgtggactacagc
gacacgctgactgaaaaacagtggctgcgggcgattgaagatggaaacctggaggagatg
gaggaggagatccggctgaaaaaacgcaaacgcaaaagacgtcaggacaaggactccggc
agagaggacggaggcgcgaaggccaagaagagacgtggacgaccgccagcagagaagctg
tcccccaacccgcccaaactcaccaagcaaatgaacgccatcattgatacagtgatcaac
tacagagacggctctggaaggcaactgagtgaggtgtttgtccagcttccatccaggaag
gaactcccagaatattacgagctgatccggaaacctgtggacttcaaaaaaatcaaggaa
cgtgtgagaaaccataaatacaggaatgtgggagacctggagaaggacgtgatgctgctc
tgtcaaaacgcacagaccttcaacttggagggatcccagatatacgaggactccatcgtt
cttcagtctgttttcaagagcgccagacagaagatcgccaaggacgatgacagcgatgat
gacagtgacgaggaggaggaggaggacgacgatgactcagaggccgaggccaagtcagtg
cgggtaaagatcaagctgagcagggaggcacgcggccacgacaaaggcaagaagaggcag
agccgagggaaggccaagccggtggtcagcgacgacgacagcgacgaggaccaggatgat
aatgatcaatcagacaagagtaaaagtgatgacgagtga
DBGET
integrated database retrieval system
