| Entry |
|
|---|
| Name |
(RefSeq) probable global transcription activator SNF2L2
|
|---|
| KO |
| K11647 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] |
|
|---|
| Organism |
onl Oreochromis niloticus (Nile tilapia)
|
|---|
| Pathway |
| onl03082 | ATP-dependent chromatin remodeling |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:onl00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100699288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:onl03021]
100699288
03036 Chromosome and associated proteins [BR:onl03036]
100699288
Transcription machinery [BR:onl03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100699288
Chromosome and associated proteins [BR:onl03036]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100699288
Chromatin remodeling factors
BAF complex
100699288
PBAF complex
100699288
GBAF(ncBAF) complex
100699288
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
LG12:complement(35563122..35626658)
|
|---|
| AA seq |
1592 aa
MSGPSETSGGMSHPGPSPGAGMSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYSMHKPMEGMNDKSMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHMPPAQSGPMMSMDPQGGMSSMSNMGQQV
RGSSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQPQQQP
QPQPQAPSASPYSRPPGMPMAPMGGPQSSPCPAPAMQVHNQSTGPKPWTDGQCPENQTIA
QKQLTPVASGRPSPAPPQASAVPAGPMPGSSGTPQPPGQQGSVMLPIQHKQNRITPIQKP
QGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQ
DVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNS
ILQHAKDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRRKRKKKVDGDGEGTS
AIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDS
EESGSEFEEEEEEEASKGETEEKKIIDPNGDEVTEGAAKNIIESAKQDVDDEYSVPTGQT
SSQSYYGVAHAVIERVEKQSSLLINGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKT
IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVP
QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR
LLLTGTPLQNKLPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGERVDLNEEETILIIR
RLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKK
GKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDR
ILPKLQATNHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGS
QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV
NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDE
TLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYE
EEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSG
REDGGAKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRK
ELPEYYELIRKPVDFKKIKERVRNHKYRNVGDLEKDVMLLCQNAQTFNLEGSQIYEDSIV
LQSVFKSARQKIAKDDDSDDDSDEEEEEDDDDSEAEAKSVRVKIKLSREARGHDKGKKRQ
SRGKAKPVVSDDDSDEDQDDNDQSDKSKSDDE |
|---|
| NT seq |
4779 nt +upstreamnt +downstreamnt
atgtccggcccctcagagacatcaggtggtatgtcgcatcctggcccttcacctggggcg
ggtatgtccccagggcccatcttgggccccagccctggaccagatccctcaccgagctct
gttcacagcatgatgggccccagccctggacccggaacacccaatgcacctcatggcatg
cagggccagggacaaagtgattactctcaggacagcatgtattctatgcataagcccatg
gaggggatgaatgacaagtcaatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgaggtctctccatagtggcatggggcctccacagagtcctatggaccagcacagc
caagggtacatgtctccccacccatccccaatgggagtccatgagcacgcttcaagtccc
atgtcaggaggcggaggtggacctacacctccacacatgccacctgcccagtcaggccct
atgatgtcaatggatccccaaggaggcatgtccagcatgtccaacatgggccagcaggtg
agggggtcgtctgcttttagtccagtacagctgcagcagctcagagctcagattctggcc
tacaagattctgggtcgtgggcagccactaccggaaaaccttcagctggctgttcaaggt
aaaaggagcctacccacaatgcaacagcagcagcagcagcagcagccacaacaacagcca
cagccgcagccgcaggcaccaagtgccagtccttacagcaggcctccaggtatgccaatg
gcacctatggggggtccccagtcgagtccctgcccagccccggccatgcaagtacacaat
caaagcacaggacccaagccttggactgatggccagtgtcctgaaaatcaaaccattgca
cagaagcagctcactcctgttgctagtggtcgcccatctcctgcaccacctcaggcctct
gctgtgccagctgggcccatgccaggcagttcggggacccctcagcctcctgggcagcag
gggtccgtaatgctcccgatacagcacaagcagaaccgcatcacgcctatccagaagccc
cagggcttggacccagtgggaatcctgcaggagagagaatacaggctgcaggctcggatt
gcacatcgaatccaggaactggaaagtctgccaggctcgctgcctccggacctcaggact
aaagccacagtggagctcaaggctctgcgtctgctcaacttccagcgacagctgaggcag
gacgtcgtggcctgtatgagacgagacacgaccctggagacggccctcaactcaaaggct
taccggcgtagtaagcggcagacgctgagggaggcacgcatgaccgagaagctggagaag
cagcagaagctcgagcaggaaaagaagcgcaggcagaaacatcaggaatatctcaacagc
atcctccaacatgccaaggacttcaaagagtatcaccgctcagtgtccggtaagatgcag
aagctcaccagagccatcgccacctggcacaccaacacggagcgtgagcagaagaaggag
acggagagaatcgagaaggagaggatgaggagactcatggcagaagacgaggaagggtac
cgaaaactaatcgatcaaaagaaagacaagcgtctggcctacttgctgcagcagacggat
gaatatgtggccaacctcaccaccctggtgtatgaacacaaagctgctcaggctgccaag
gagaagaagaggagacggaagagaaagaagaaggtggatggcgatggtgaaggcacgagc
gcaattggacctgatggagagccaatggatgaaagcagccagatgagtgagctgcctgtc
aaagtgattcagactgagaccgggaaagttttgcagggaactgaggccccaaaatccagc
caactggaggcttggctcgagatgaaccccgggtatgaagtggccccgcggtcagacagc
gaggagagcggctcagagtttgaagaggaggaggaagaggaggcgtccaaaggagagaca
gaggagaagaagataatcgatcccaacggagatgaagtcactgagggagctgccaagaac
atcatcgagtcagccaagcaggatgtggatgatgagtacagtgttcctactggccaaacc
agctcccagtcttactacggcgtggcccacgctgtcattgagagggtggagaagcagtcg
tcactgttgatcaatgggatgctcaaacagtaccagattcaggggctcgagtggatggtg
tccttgtacaacaacaatctcaacggcatcttggctgatgaaatggggctcggcaaaacc
atccaaaccatcgcccttatcacctacctgatggagcacaagaggctcaatggtccctat
ctcatcatcgttcctctctcgaccttgtctaactgggtctatgagcttgacaaatgggca
ccgtctgtggttaaaattgcttacaagggcactcctgctttgcgtcgtgggcttgtgccg
cagctccgcagcgggaagttcaacgtcttgctgaccacctatgaatacatcatcaaagac
aagcatatactggctaagattcgctggaagtacatgatcgttgacgagggtcaccgcatg
aagaaccaccactgtaaactgacacaggtgctgaacacgcactacgtggctccccgtcgg
ctgctcctcaccgggactcctctgcagaacaagctgcccgagctgtgggccctgctcaac
ttcctgctgcccaccatcttcaagtgctgcagcaccttcgagcagtggtttaacgcaccc
tttgccatgacaggagagagggttgacttaaacgaggaggaaactatcttgatcatccgg
cgtctgcacaaagtgctccgcccgtttctcctgcgccggctgaagaaagaggtggagtct
cagctgccagagaaggtggagtacgtcataaagtgtgacatgtctgccatacagaaggtt
ctgtaccgccacatgcagaaaggcatcctcctcactgacggctcagagaaagacaagaag
ggcaaaggtggagcaaagaccttaatgaacaccatcatgcagctgaagaagatctgcaac
catccgtacatgttccagcacattgaagaatcctttgctgagcacttgggctatccaaac
ggcatcatcagtgggcctgatctgtatagagcatctgggaagtttgagctcctagatcgc
atcctaccgaagctccaggccaccaaccacagagtgctgctgttctgccagatgacctct
ctcatgaccatcatggaggactatttcggataccgcaactttcagtacttgcgtcttgat
ggaaccaccaagtccgaggaccgagcagcactgctgaagaaattcaatgaggaaggctct
cagtacttcatcttcctcctgagtaccagagctggtggcctcggcctcaacctgcaggct
gctgacactgtggtcatcttcgacagtgactggaacccacaccaggaccttcaggctcag
gaccgggctcaccgcatcggtcagcagaacgaggtgcgcgtgcttcgtctctgcactgtc
aacagcgtcgaagagaaaatcttggctgctgccaaatacaaactgaacgttgatcagaag
gtcatccaggccggcatgtttgaccagaagtcgtcgagccacgagcgccgcgcctttctc
caggccatcttggagcacgaggagcagaacgaggaggaagatgaggtgcctgatgatgaa
actctgaaccagatgatagcccgcaatgaggatgaatttgagctcttcatgcgcatggac
atggaccggcgcagggaggatgctaggaacccaaagcgtaagcctcgcctaatggaggag
gacgagctgccttcttggatcatcaaagatgacgccgaagtggagcggctcacctacgaa
gaggaggaggagaagatgtttggtcgagggtctcgctgccgtcgggacgtggactacagc
gacacgctgactgaaaaacagtggctgcgggcgattgaagatggaaacctggaggagatg
gaggaggagatccggctgaaaaaacgcaaacgcaaaagacgtcaggacaaggactccggc
agagaggacggaggcgcgaaggccaagaagagacgtggacgaccgccagcagagaagctg
tcccccaacccgcccaaactcaccaagcaaatgaacgccatcattgatacagtgatcaac
tacagagacggctctggaaggcaactgagtgaggtgtttgtccagcttccatccaggaag
gaactcccagaatattacgagctgatccggaaacctgtggacttcaaaaaaatcaaggaa
cgtgtgagaaaccataaatacaggaatgtgggagacctggagaaggacgtgatgctgctc
tgtcaaaacgcacagaccttcaacttggagggatcccagatatacgaggactccatcgtt
cttcagtctgttttcaagagcgccagacagaagatcgccaaggacgatgacagcgatgat
gacagtgacgaggaggaggaggaggacgacgatgactcagaggccgaggccaagtcagtg
cgggtaaagatcaagctgagcagggaggcacgcggccacgacaaaggcaagaagaggcag
agccgagggaaggccaagccggtggtcagcgacgacgacagcgacgaggaccaggatgat
aatgatcaatcagacaagagtaaaagtgatgacgagtga |
|---|
