Oreochromis niloticus (Nile tilapia): 100699331
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Entry
100699331 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100699331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100699331
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100699331
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100699331
NCBI-ProteinID:
XP_003454626
Ensembl:
ENSONIG00000014409
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Position
LG5:19827790..19842769
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AA seq
584 aa
AA seq
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MADTLCRLFHSSTKSTSKTVEERGKWGSKKEFILSVAGAIIGLGNVWRFPYLCYKNGGGA
FLIPYVLFLVTCGIPLFVLETALGQYTSQGGIMCWRKVCPLFEGMGYTSQMIIFYGSISY
IVILAWAFLYLFSSFSGELPWATCNNTWNTNRCVEINNYNTTANWTSPVNASSSVVEFWQ
RRVLNTSSGIENLGSIQWDLSLCLLLAWVICYFCVWKGVRSTGKAAYFTATFPFVLLAML
FVRGLTLPGAFHGIKYYLYPNPERLADPLVWMDAGTQIFYSYAICLGCLTTLGSYNKYNN
NCYRDSFYLCLLNSATSFMSGFAIFSVLGYMSQKQGVDIATVAESGPGLVFIVYPQAVTL
LPWPQVWSVCFFAMIILLGIDGQFAGLESIMTSLTDVFPSHLRKGYHRELYLMLICVLCY
LFGLLLVSRAGAYILQIFDHYVCSGPTLLLMAIFQSVTIGWIYGADRFYTNIEDMIGYRP
LSLIKYCWLYVTPLICSGTLIFLLLKYTPLKFNNTYVYPWWAYCIGWFLALSSLSMIPVT
MIYKLAKGRGTLWQRLKTSSRPASDLRGMEKEMINVHHSLSAPI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcagacactctgtgcaggctcttccattcctccacaaagagcacttcaaaaactgtt
gaagagcgtggcaagtggggcagcaaaaaggagttcatcctgtctgtggccggtgctatt
attggacttggcaacgtgtggagatttccgtatctttgctacaagaatggcgggggtgct
ttcttaattccttacgtcctgttccttgtgacctgtggcatacctctgtttgtgctggag
acggcactgggccagtacaccagtcagggggggatcatgtgctggaggaaggtctgcccc
ttgtttgaaggcatgggatacaccagccaaatgatcattttctatggaagtatcagctat
attgtgattttagcctgggcttttctctacttgttctcttccttctctggagagttgcca
tgggccacctgtaataacacatggaatacaaatcgttgtgtagaaataaacaactacaat
accactgccaactggacatcacctgtgaatgcatcatcttctgttgtagagttttggcag
cgtcgggtgttgaatacatccagcggcatagagaacttgggaagcatacagtgggacctt
tctctgtgccttcttctagcctgggtcatctgctacttttgtgtttggaagggagtaaga
tccacgggaaaggctgcatatttcacagccacattcccctttgtcctgttagccatgctg
tttgtcagaggactgacccttcctggagccttccatggtatcaagtactacttgtacccc
aatcctgaacggctcgctgacccactggtttggatggacgctggaacacaaatattttat
tcctatgccatatgtctgggatgcctgactacacttgggagctacaacaagtacaacaat
aactgttacagagactccttttatctttgcttgttgaacagcgcgaccagcttcatgtca
ggctttgccattttctcagttctgggttacatgtcacaaaagcagggtgtcgacattgct
acagttgctgagtcaggtccaggccttgttttcatagtctacccacaagctgtgaccctg
ctgccttggcctcaggtctggtctgtgtgcttcttcgccatgatcatcttgttaggaata
gacggtcagtttgcaggtcttgaaagcatcatgacctctttgacagatgtcttcccctcc
catttaaggaaaggatatcacagagagctttatctgatgctgatctgtgtgctttgctat
ctgtttggcctgttattggtgtcacgggctggcgcatacattctgcagatcttcgatcac
tatgtttgcagcggtcctactcttctgctgatggcaattttccagtcagttacgattgga
tggatttatggtgccgatcgcttctacaccaacattgaggacatgatcggatacagacct
ctgtcactgatcaagtactgctggctctatgtcactcctctcatttgcagtggaacactt
atatttttgctcctgaagtacaccccactgaagttcaacaacacctacgtgtatccttgg
tgggcttactgcattggctggttcctcgcactgtcgtcgctttctatgatcccagtcact
atgatctacaaactggccaaaggaagagggactctctggcagcgtctgaagaccagctcc
cggcctgcaagtgatcttcgaggaatggaaaaggaaatgataaatgtccatcattcacta
agtgccccaatataa
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