Oreochromis niloticus (Nile tilapia): 100699346
Help
Entry
100699346 CDS
T06104
Name
(RefSeq) homeobox-containing protein 1 isoform X5
KO
K24885
homeobox-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100699346
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100699346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_31
HTH_26
CUT
AbiJ_NTD3
HTH_24
HTH_37
HTH_23
Motif
Other DBs
NCBI-GeneID:
100699346
NCBI-ProteinID:
XP_003437746
Ensembl:
ENSONIG00000003040
LinkDB
All DBs
Position
LG1:complement(34014097..34033036)
Genome browser
AA seq
428 aa
AA seq
DB search
MMFQQCEEPRFTIEQIDLLQRLRRTGITQAEVLHALDTLDHLDRQHGHKLTHKPSYVPPS
SSSTVAASSSMTSTATQTSFPNNRLSLSPNNNFDTTSPPLPVPVASPNTITAVVPNGLVA
VTNGKLSPPRFPLGVVSATVTTPGYAFEASEEDIDVDEKVEDLMRRDSAVIKEEIKSFLA
NRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAMRATP
LALEEVMDWNQAPPTFGSAPGGFRLRRGSRFTWRKECLAVMEGYFNDNQYPDEAKREEIA
TACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSPGGQ
SNSDDVDGNDFPDQDEPTVHSALSEPQDPVSLEKAAAVSDSSPAVTNQGDGAGCSMGNDI
KTETLEDD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccagcagtgtgaggagcctcgcttcaccatcgagcaaattgacctcctccag
aggctacggaggacgggcatcacccaggcagaggttctccatgcgctggacaccctggat
cacctggatcggcagcatgggcacaagttgacccataaaccttcctatgtaccaccctcg
tcttccagcactgtcgccgcctcttcttccatgacttctaccgccactcagacaagtttt
cccaacaaccgcctctcattgtcccctaataacaactttgacaccacctccccacctctg
cctgttccagtagcctcacctaataccataacagcagtagtgccaaacggtttggttgcc
gttaccaatgggaagctttcaccaccccggtttcctcttggtgtggttagcgctactgta
accacaccagggtatgcgtttgaagccagtgaagaggacatagatgttgatgaaaaggtg
gaggacttgatgaggagggacagtgctgtgatcaaggaagagattaaatccttcctggcc
aaccgacgtatatcccaggctgtggttgctcaggtaacagggatcagtcagagccggatc
tcccactggctcctacagcagggatcagacctcagcgagcagaagaagcgagctttcttc
cgctggtaccagctggagaagaccaatcctggtgctactctggcaatgcgagccaccccc
ttagcactggaggaggtgatggactggaatcaagctcctcctacatttggttcggccccc
ggtggcttccgtctgcgacgagggagcagatttacctggaggaaggagtgtctggctgtc
atggagggctatttcaatgataaccagtatcccgatgaagccaagagagaggagattgcc
actgcctgcaatgctgtcatacagaaaccaggaaagaagctgtctgatttggagagggta
acatccctgaaggtctacaactggtttgctaaccgccgcaaagacatcaagaggcgtgct
aatattgaagcagccatcttggagagtcatggcatcgaggttcagagtccaggaggtcag
tcaaacagcgacgacgtggatggcaacgacttccctgaccaggacgagcccacagttcac
agtgccctgtccgagccccaggatccagtcagtttggagaaggcggcggcggtgagtgac
agcagcccggcggtaaccaatcagggggatggcgcagggtgcagcatggggaatgacatc
aagacggagactctggaggacgactga
DBGET
integrated database retrieval system
