Oreochromis niloticus (Nile tilapia): 100699363
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Entry
100699363 CDS
T06104
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X2
KO
K12817
pre-mRNA-splicing factor 18
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100699363 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100699363 (prpf18)
Spliceosome [BR:
onl03041
]
Complex C
Other components
Step II factors
100699363 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Sec3_C-term
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
100699363
NCBI-ProteinID:
XP_003440426
Ensembl:
ENSONIG00000014854
LinkDB
All DBs
Position
LG7:55935546..55942400
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AA seq
341 aa
AA seq
DB search
MDILKAEIARKRKLLEEKNLVEDSKRFFKRAELSQKEREDYFRRCGYKIEKKEEDEPSTS
TNPVLELELTEEKLPMTLSRQEVIRRLRERGEPIRLFGESDYDAFQRLRKIEILAPEVNK
GLRNDLKAAMDKIDQQYLNEIVGGTESGELDTQHDLKVHEENTTIEELEALGKTLGTGDD
DGDQDVIAKFLRFLLGVWAKDLNSREDHVKRSVQGKLASATHSQTESYLKPLFRKLRKKN
LQADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKH
VAHVLNDETQRKYIQGLKRLMTICQKHFSTDPSKCVEYNAL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatatacttaaagctgagatcgcaagaaagaggaaactcctcgaagaaaaaaatctt
gttgaagactccaaaagattctttaaaagggctgagctctcacagaaggaaagagaagat
tacttcagaagatgcggatacaagattgagaagaaagaggaagatgagccatccacttca
actaatccagtcttggaactggagctcacagaagagaagctcccaatgacactttcacga
caggaggttattcgacgacttagagaacgaggggaaccgatccgattgtttggcgagtcc
gattatgatgccttccagaggctccggaaaattgagattctggccccagaagtaaacaag
ggcttgaggaatgatctgaaagccgccatggacaagattgaccagcagtacctgaatgag
attgttggaggaacagagtcaggagaattggacacacagcatgacctaaaagtgcacgaa
gaaaacaccacaatagaagaacttgaggctcttggaaaaactcttggaacaggtgatgat
gatggagaccaggatgttattgctaaatttttgaggtttcttcttggcgtttgggccaaa
gatctgaacagccgagaggaccacgtgaagcgcagcgttcagggcaagctggccagtgcg
acacactcgcagaccgagtcttacctcaagcctctcttcaggaagctcaggaagaagaac
ttacaagctgacatcaaagagtcaatcacagacatcataaaattcatgttggagagagaa
tatgtcaaggcaaatgatgcatatctacagatggccattggtaatgccccctggccaatt
ggtgtgactatggtgggaatccacgcccgtaccggacgagaaaagatcttctccaagcac
gtggcccacgttcttaatgacgagacgcagagaaaatacattcagggactaaagaggcta
atgaccatctgccagaaacacttctctactgatccatcaaagtgcgtggagtacaatgct
ctttaa
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