Oreochromis niloticus (Nile tilapia): 100699405
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Entry
100699405 CDS
T06104
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04270
Vascular smooth muscle contraction
onl04625
C-type lectin receptor signaling pathway
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100699405 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100699405 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100699405 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100699405 (arhgef12)
Membrane trafficking [BR:
onl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100699405 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
100699405
NCBI-ProteinID:
XP_005455874
Ensembl:
ENSONIG00000006183
UniProt:
A0A669F2X6
LinkDB
All DBs
Position
LG14:complement(20690454..20731768)
Genome browser
AA seq
1413 aa
AA seq
DB search
MSDTQPSFTDRFPKKANRTSSILSKDHPPDKKPKSEKNSIPSNEFDPTEALVVQKSGSSS
VLPEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTHVAHSNHTEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPDMSLSPNSPAPQRPC
SPQDSILPIQQPWDEKADVLEAMKEEYSRNPSPKLLKDIQEAEKHIPQLQGQLPKAIGTT
QEIVPSDDADEDAFVPKGENNADLFWSRTPISRVFRPSSPESLCPREFSCPSPKTTPRNS
YNSFHFPETEDTTDLDALSPTTVSSPSSSRLVSQIIGAEDDYFDSDQEQTNGQCNSFNSI
ELLKSRPAHLAAFLYHVISQFDPAPVLCYLYADLYKQTNSKETRRVFMDLHNFFIDRGAN
LKVGVPESVSADLDRRRTELIPEEINRQHVQTLQDSLLPDIQKNLEDFRQKRSMGLTVAE
AELGRLDQERVRDRGTLERERSYAENIIAKIDDILVTTQLTEEEKCTTMQYVIYTYMKHL
GVRVKEPRSLESKRLRISFLPMIKRGNKTEKEREEKVKKVPKNNKFNIRVPQRRPSRIEA
SGGTTQEGRPKPQKQMSQPALSTSDYKESGRLKGSQSSEGPELIHSMSVNSSSPISAIYS
SDTSRDADMGGTPIFGPCRVSEILQSDSLDGLPCSASQFDPLYNLDQVPQDDKESDRTHE
GTPKAIRRLEGLGAADIQSEDDQGTDSECDPPNWQHLVRPEVLAGLRPHEIKRQEVIHEL
FYTERAHVRMLKVLDNVFYQKLTKDSILPPADTKNIFSNLEEVLQLHVNISDQMAAVRKR
NDSSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCSNQPFALELIKTKQKKDSRFTSFILEA
ESNRQCRRLQLKDIIPVEMLRLTKYPLLLDNIVKYTDNAEEKEKVKQAADCCRKILSHVN
QAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLDLTKKTMVHEGPLSWKVNRDKT
IELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNK
SFFVLSMSENGAQIYELMAPTVSDQRTWQRLITQRAEAMKVKPHSVIPLPQTVGERDGVE
IITTGVSRLSRDTDRTSTGSTQSTDKESSPVCRSALQTSLPGSNPFEGVKTEEEEEGFVD
PELSYPVAEDCRGASFNMFPSRADEALKTLAALKQVLVTQLMSQEAAEQTKRSTGARLLR
TTSLRTPIDSRARVTVHNGSEKTGSQTDDLAQDLGSGDTGFFDSTDDYAAYLVLEGYGGP
GESSTDDDILATTTGKQLSTSQGCAADSGINLRFSSTSQAGSLSSFSRQVLSHLRNLQAN
LNYLKEVEAKYNSLIQQRPERSAADTDGNKDKR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagcccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgaaaaaaattcaatt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctaccagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaataatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaatccagtgtttgtgcagctt
gtcaaagaagatggggctgcgatgcgagcaggtgttcagacaggagacaggatcatcaag
gttaatgggacccatgttgcacattctaaccacacagaagtggtgaaactcattaaatcg
ggctcctatgtggccctcacagtgttgggccggccccccgggcttgcccagatacctttg
cccgaagcagagccagatatgagcttatctccaaactctccagcaccacagcgcccctgc
agtcctcaggacagcatcttacctattcagcagccatgggatgagaaagctgacgtcttg
gaggccatgaaggaggagtacagcagaaacccctcccctaaactactgaaagacatccag
gaagctgaaaaacacattcctcagctgcagggtcagctccccaaggccattgggacaaca
caggagattgttccaagtgatgatgcagatgaagatgcatttgtccccaagggagaaaac
aatgcagacctgttctggagcaggacccctatatctcgcgtatttcggccatcatctcca
gaaagcctgtgtccaagagagttctcctgccccagcccaaagaccacacccaggaacagc
tacaactccttccacttcccagagacagaggacaccactgatctggacgctctgtcccct
accacagtcagcagtccctcctcgtctcgccttgtttcgcagatcattggagctgaggat
gactattttgattcagaccaagagcagacaaacggccagtgtaacagctttaatagtatt
gagctgctaaagtctcgccctgcccacctcgcagcctttctctatcatgtcatctctcag
ttcgaccctgctcctgtgctgtgctacctctatgctgacctctacaagcagaccaactcc
aaagagaccagacgggtgttcatggaccttcacaatttcttcattgaccggggagcaaat
ttaaaagttggtgttcctgaatctgtctccgctgatctcgatcggcggcggacagaactg
atcccagaggagataaacagacaacatgttcaaacactgcaggactctctgctccctgat
attcagaagaaccttgaagatttcaggcagaagcgcagtatgggcctaacagtggctgaa
gcagagctgggcagactggaccaagagagagtcagagaccgcggcactctcgagcgggaa
cgctcatatgctgaaaacatcatcgcgaagatagacgatatcctggtaactactcagctc
acagaggaagagaaatgcactacaatgcagtatgttatatatacgtacatgaagcacctt
ggtgtgagggtcaaggaacctcgcagcctggagtccaaacggcttcggatcagctttctt
cccatgattaagcgaggcaacaagacggaaaaggaaagagaagagaaagtgaaaaaggtt
cccaagaataataaatttaatattcgtgtacctcagcggcggcccagccgcatcgaagca
tcagggggtacgacccaggagggacgacccaagcctcagaaacagatgtctcaacctgca
ctgtctacaagtgattataaagaatctggtcgtctcaaaggcagccaatcaagcgagggc
cctgaacttatacactccatgtctgtcaactcatcatctccaattagcgccatctacagc
tctgacaccagcagagacgctgacatgggtgggactccaatatttggcccctgcagggtg
agtgaaatccttcagtctgactctctggacgggttgccatgctctgcttcgcagtttgac
cctctatataacctggaccaagtgccacaggatgacaaagaaagtgacagaactcacgag
ggaacaccaaaagctataagaaggcttgagggactcggtgctgctgatatccagagcgag
gatgaccagggaacagattctgagtgcgatcccccaaactggcagcatctggtgcgtcca
gaggttctagccggtctcaggcctcatgaaatcaagagacaggaagttatccacgagctg
ttttacacagagcgtgcacatgtacggatgctgaaggttttggacaacgttttctaccag
aagctcaccaaagactccatcctgcctcctgctgacaccaagaatattttctccaatctg
gaagaggttctgcagctgcatgttaacatatcagatcaaatggctgccgttcggaagaga
aatgactcttcagtaattgatcagataggagacgacttgctttcctggttcagcggtgga
gaggaagagaagatcaagcaggcggtggggacgttctgcagtaaccagccttttgctctg
gagctcataaagaccaaacagaagaaggactcgaggttcacttcattcattctggaggca
gagagtaacaggcagtgtcgccgactgcaactcaaggacatcattcctgtggagatgctg
cggctcaccaagtaccctctgctgctcgacaacattgtcaagtacacagacaatgcagag
gagaaggagaaagttaagcaggcagccgactgctgcagaaagatcctcagtcacgtcaac
caggctgtgaaggaatctgaggacaaacagaggttggaagactatcagagacgattggac
ctctcttctctaaagcagacagacaacccaatgatcctggagctaaagaacttggatctg
acaaagaaaacgatggtgcatgagggtccactgtcatggaaagtgaacagggacaaaact
atcgagttgtacacactcctcctggaggacatcctggttctcctacagaaacaagatgag
cgtctgatactgaagtgtcacagcaaaaacctggcgggcactgcagataccaaacatatc
ttcagccctatcatcaaactcagcacggtgctggtgcgctcagtggccacagacaacaag
tccttctttgttctttcgatgtcggaaaacggagcccaaatctacgagctaatggcgccc
actgtctcagatcagagaacgtggcagcgtctaatcacgcagagagctgaagccatgaaa
gttaagcctcacagcgtcataccattacctcagaccgttggggagagagacggcgtggag
atcattacaacgggagtttccaggttgagtagagacacggaccgcacatccactggcagc
acccagtccacagataaggaaagcagtccagtctgtagaagcgcactgcagacgtcgcta
cctggcagtaatccatttgagggagtgaagactgaggaggaagaagaaggctttgtggac
ccagaactttcttatccagtggctgaggattgcagaggagcctcgtttaacatgttcccc
tcgagggcagacgaagcactgaaaacattggcagcattaaagcaggtgttagtcacccag
ctgatgtcccaggaagctgcagagcaaactaaacgctccacgggggctcgcctcctcagg
accacctctctgcgcacccccatagacagccgtgcacgagtgacagtccacaacggctca
gagaagaccggctcccagacagacgacctggctcaggacctgggttcaggagacaccggc
ttctttgactcgactgatgactatgcagcgtatttagtcctggagggttacggtggccca
ggggagagcagcacagatgatgacatcttagcaacaaccacagggaagcagctgagcact
tcccaaggctgcgctgctgactcgggcatcaatttgagattttcttcaacatcacaggcc
ggcagcctctcctctttcagcagacaggtcctctctcaccttcgaaatcttcaggccaac
ctcaattatctgaaggaggttgaggccaagtacaacagtctaatacagcaaaggccagag
agatcagcagcagacacggatggaaacaaagataagagatag
DBGET
integrated database retrieval system
