Oreochromis niloticus (Nile tilapia): 100699556
Help
Entry
100699556 CDS
T06104
Symbol
exosc3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100699556 (exosc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100699556 (exosc3)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100699556 (exosc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
KH_6
RRP40_N_mamm
Rrp40_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
100699556
NCBI-ProteinID:
XP_003443422
Ensembl:
ENSONIG00000035455
UniProt:
A0A669E3W3
LinkDB
All DBs
Position
LG2:complement(9765794..9767845)
Genome browser
AA seq
244 aa
AA seq
DB search
MFSTVRERVGEVLLPGDEFSFEAEEKISLTAPVKSEKVVCGPGLRRCGDRLVVFKSGVLR
HKEPNVFWIDSQQRRYVPAKGESIIGIVTAKSGDVFKVDFGGSEQASLSYLTFEGATKRN
RPNVQVGDLVFAQFLIANKDMEPELVCIDSSGRANGMGVFGAGGLLFRVSLGLVRRLLAP
HSDIRSDLEQLFPCELVVGMNGRIWVKSATVQQTLIIANLLQSAETMTAQQRQQLFRKVQ
QGAF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaccgtgagggaaagggttggggaggtgctgttaccgggggacgagttctcc
ttcgaggccgaagagaaaatttctctgacggcgccggtgaagtcggagaaggtggtgtgc
ggtccgggcctgcggcgctgcggtgaccggctagtggtgtttaagagcggcgtgctgcga
cacaaggagcccaacgtgttctggatcgattcccaacagagaaggtatgtcccagctaaa
ggagagagcatcatcgggatcgtcaccgccaaatctggagatgtcttcaaggtggatttc
ggagggagtgagcaggcgtctctgtcctacctgacattcgaaggggcgaccaagaggaac
agacccaacgtccaggtgggtgacctggtgtttgctcagttcctcatagccaataaggac
atggaaccagagctggtgtgtattgacagctcaggacgagccaatgggatgggagtgttt
ggagcaggaggtctgctattcagagtctctctcggcctcgtcagaaggctgctggcaccc
cacagcgacatccgctcagacctcgagcagctcttcccgtgtgagctcgtggtcgggatg
aacggacgcatttgggtcaaatcggccaccgtgcagcagacgctgatcatcgcaaacctg
ctgcagagtgccgaaaccatgacggctcagcagagacagcagctgttcaggaaggtccag
cagggggcgttctag
DBGET
integrated database retrieval system