Oreochromis niloticus (Nile tilapia): 100699568 Help Entry 100699568         CDS       T06104                                  Symbol scaf8 Name (RefSeq) protein SCAF8 isoform X1   KO K13191   RNA-binding protein 16 Organism onl  Oreochromis niloticus (Nile tilapia) Brite KEGG Orthology (KO) [BR:onl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:onl03021]     100699568 (scaf8)    03041 Spliceosome [BR:onl03041]     100699568 (scaf8) Transcription machinery [BR:onl03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      100699568 (scaf8) Spliceosome [BR:onl03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     100699568 (scaf8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CID RRM_1 Transformer RRM_occluded RRM_YTH1 Motif Other DBs NCBI-GeneID:  100699568 NCBI-ProteinID:  XP_005477714 LinkDB All DBs Position LG19:28126068..28150554 Genome browser AA seq 1361 aa AA seqDB search MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIISTFQHLYRCPSDDKSKIVRVLNLWQKN AVFKSDIIQPLLDMAAGIPPPSVTPVMPSSAAPVNNTTPGTPATPATPANIVQGLPDWAS QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL TAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERNEESKKDSSTSQLPMVSEPINSSLF HQLAEQLQQQNLEQFQKQLLEHQQKAMNIEGQDSIFGQENSVSNAQSSSQPQLPEPENKI DDSIDNQQQDMDLDEGPDGMEEEIFEAEEKKTLNTRSRTRSRSRSRSPKRRRSRSRSGSR KRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQ VDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGTFKIGSKI IKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWEAAK NTEQAKEAASQPVSTETTAASNTQTETFNQQVTMMPVQSYIPRIQLPVAQAVPSAVGLVP PAFPVTMGIPPPGYGPPPPFIRASFNASQPPPGFMQAAQTAGMASASASLVQPSVASSQD AVKDSPFGAMIPPTSTIPGSFMPSAIPGAAVFNPVGVQTQQAANEKTQSAEGMDATAELT LQGMQNAVRSGMGLLGMHPTASLTHPLHQSGLSGQRMPGLLPLDVRPNLLQPGAAARFPL LMQQAHAQQTPGLLDSPIQAQTRPRAPFPQLDPFHRPPNITSENAPKTEEESSSGADEGK DQDYRFPPMEKQSTGLLRTPPPEHREPLAGSGAGVRPPLLQTPGTQPARSSLVGRLQALA GFTPDNRWNQARGDFDERDGMRGGPQAPGGPKGFPEAGPTPGQNFPNRFDNRPGTAAGVS VNAGAVGGPQAWNRSGNAAAPFESELHQDLDERRRPWDRQRDRDERDFDFRREMNGNRRS RERERERDRGRDRTREHERERDHDKERERERGGSAPLLPLPTPLLPTPPLNPNLTLNQGK VLAPLKLNPQIQSRFQPPLLPQAQGKLPLLGLNQAAPQVQIRSPPPSQSQACSMPEPESE IPTPSEAPQAQPTPSTLSHDPSSDGEGQSTLTEAPPKSESSPRPETSPHTDSPSQPIAQS ASQTTGSSDSETPTRASPPAEASSQDSSMAFTQAASPPEDTTHSAEEQKSGQKDEEESQE RPSSSQPQGVSGPEMDNDQSEPVEDAASLPVVDTVTDTEGT NT seq 4086 nt NT seq  +upstreamnt  +downstreamnt atggaggcggtcaaagcctttaacaatgagctgtactcattgaatgagtacaagcccccc atctccaaggccaagatgactcagatcaccaagtctggaataaaggctataaaattttac aagcatgttgtccagagtgtagagaagttcatacagaagtgcaagccagaatacaaagtc ccagggctgtatgtcatcgactcgattgtcagacagtctcgacaccagtttggcacagag aaggacgtatttgctccgcgcttcagcaagaatatcatctcgacgttccagcacctctat cgctgcccttcagatgataagagtaagattgtgagagtcctgaatctgtggcaaaagaat gcggttttcaagagtgacatcattcagcctctgttggatatggcagcggggattcctcct cccagtgtcacacctgtcatgcccagcagtgctgccccggtcaataacactacacccggt accccagctacaccggccactccagccaacatagtgcagggtctgcctgactgggcttcg cagattaccaacacagacactgtggctgctgtggcccagatcttgcagagtccccagggg caacagctccagcagctggtgcagagtctgcagatgcagcagcagaagccccaaccgtcc ctgctgcaggccttggatgctggcctcgtggtgcagttgcaagctctgacagctcagctc actgccgcagctactgccaacagcctcaaccccctggagcagagggtctcctcttttaat aagaaacttttgggtccttttgactttggaaacgattcagagcgtaatgaagaatctaaa aaggacagctcaacatctcaactgcccatggtgtcggagcccattaacagctccctcttc catcagttggctgagcaacttcaacagcaaaacctggagcagtttcagaagcagctgctg gagcatcagcagaaggcaatgaacatagaagggcaggactcgatctttgggcaagagaac tcagtttcgaatgctcagagcagcagccagcctcagcttccagagccagagaataagatc gacgactccatagacaaccagcagcaggacatggatctagatgaaggcccggatgggatg gaagaggagatctttgaggctgaagagaagaagaccttgaacacacggtctagaacaagg tcaaggtcacgctccaggtctccaaagaggagaaggtctaggtcgcgctccggctcacgg aaacgcaagcatcgaaaacgttcgcggtcacgctctagagatcgcaagaggaagtcctcg cggtcttattctagtgagagacgcgcccgagaacgagagaaggagcggcagaagaaagga cttcctcccatacggtcaaagactctcagtgtgtgcagcacaactctgtgggtgggccag gtggataaaaaggccactcagcaagacctcaccaatctgtttgaagagtttggccagatt gagtccatcaacatgatccctcccagagggtgtgcctacatctgtatggtccacaggcag gatgcataccgtgcccgtcagaagctcagcaccggaacgtttaagattggctccaagatc atcaagattgcgtgggctctgaacaaaggtgtaaagcaggagtacaagcagttttgggat gtggacctgggtgtcacgtacataccttgggagaaggtaaagctggatgacctggatggc tttgccgaaggaggaatcatcgaccaggagacggtcaatgacgagtgggaagctgccaag aatactgaacaagccaaggaagctgcaagtcagccagtaagcactgagactacagcagca tctaatacgcaaaccgagaccttcaaccagcaggttaccatgatgccagtgcagtcttat atccctcgtattcagcttccagttgcacaggcagttcccagtgcggtcggtttggtgcct cctgccttccctgtcaccatgggcatacctccgccaggttatgggccgccgccacccttc ataagggccagcttcaatgcctcacaacctccgccaggtttcatgcaggctgctcagaca gcaggaatggcctcagcatctgcctctctggttcagccttcagtggcctccagccaagat gctgtcaaggattcaccattcggtgctatgattcctccaacaagcaccatcccaggaagc ttcatgccctcagccatcccaggagctgccgtgttcaacccagtgggagtgcaaactcag caggccgctaatgagaaaacacagtctgcagagggaatggatgctactgcagagctcaca ctgcaaggcatgcagaatgctgtccgcagtggaatgggtctgctgggcatgcaccctaca gcttccctcacccaccccctgcatcagtctggactgagtgggcagaggatgcccggcctg ctgcccttggatgtgcgccccaacctgctccaacccggagccgctgctcgcttcccgctt ctcatgcagcaggcccatgcccagcaaactcctggcctcctagacagtccaatccaagct caaacccgccccagggctcccttccctcagctggaccccttccaccgaccccccaacata accagtgaaaatgcacccaaaacagaagaggagtcctcctctggagctgacgagggcaaa gaccaggactaccgctttcctccgatggaaaagcagagcacgggcctgctgcggacccct cccccagagcatagggagccccttgcaggatcaggagcaggcgtgagaccacctttgctc cagaccccaggtactcagccagccagatctagcctcgtaggccgtctgcaggctcttgca gggtttacacccgataaccgctggaaccaagccagaggggactttgatgaacgtgatggc atgcgaggaggccctcaggccccaggtggtccaaagggcttcccggaggctggtcccaca cctgggcagaacttccccaaccgctttgataaccgtcccgggacagcggctggtgtttct gtaaatgctggagccgttggggggccacaggcttggaaccgtagtggtaatgccgcagct ccttttgagagcgagctccatcaagacttagatgaaagaagacgcccttgggacaggcaa agagatagagatgaaagagattttgacttcaggagggagatgaatggtaaccgccgcagc cgcgagagggagcgcgagagagacaggggccgcgaccgcaccagagaacacgaacgcgag cgagaccatgacaaagagagggagcgcgaacgtggaggctcagcaccccttctccctctg cccacacctcttctaccaactccacctcttaatcccaacctgacactgaaccaaggcaaa gtgcttgctccgctcaaactgaaccctcagattcagtcacgattccagccccctcttttg cctcaagctcagggcaagctccctctgctgggtctgaatcaggcagcacctcaagttcag atcaggtctcctcctccatcacagagccaagcatgctccatgcccgagcctgaatcagaa atcccaactccatccgaggccccccaggcacagccgacaccctcgacgctttcgcatgac ccatcatctgacggcgaaggtcagagcacattgactgaggcgcctccaaagtcagagtcg tcgccacgaccagagacttctccacacacagattcaccatcccagcctatagcccagtcc gcctctcagaccactggttcttctgacagtgaaacccctacccgtgcctccccacctgct gaggcatcgtcccaggactcatccatggccttcacacaagctgccagcccccccgaagat acgactcactctgcggaggagcagaaaagtggacagaaggatgaggaggagtcacaagag agaccctcctcgtcccaaccgcagggggtcagtggacctgagatggacaatgatcagagt gagcccgtggaggatgctgcaagtctgccagtggtagacactgtcacagacactgagggg acataa

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