Oreochromis niloticus (Nile tilapia): 100699655
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Entry
100699655 CDS
T06104
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100699655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100699655
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100699655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
100699655
NCBI-ProteinID:
XP_003445359
Ensembl:
ENSONIG00000004353
LinkDB
All DBs
Position
LG16:11288258..11359095
Genome browser
AA seq
255 aa
AA seq
DB search
MSEKMEVDLSGVKQSKGVWLVKVPKYLSQQWDKAAEKGDVGKITIGKKQGKTEVCFSLID
ELTALDAVGENDASLQVPKDHPFTMHTVGGQTMAVFSHSDTDEISLEGMVVHRAECRPVV
TDSYMKLKKLQIKESVKPQRLSQQLERAVTTIFKPVANHDFNVEYEKKKKTEGKMVRAER
QLVLDMLFSAFEKHQYYNIKALVDITKQPVTYLKEIMREIGTYNSKGAHKSTWELKPEYR
HYQSAEEEEEEMQTT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaatggaggttgacctgagtggagttaaacaaagtaaaggcgtgtggctt
gtgaaggttcccaagtatttatctcagcagtgggacaaagctgcagaaaagggagacgtt
ggaaagattaccattggaaagaagcaaggcaaaacagaggtatgtttcagcctcattgac
gagctgacggccttggatgctgtgggggagaacgatgcatcactgcaggtcccaaaggat
catcctttcacaatgcacacagtgggtggacagaccatggcagtcttcagccacagtgac
acagatgaaatcagtctggaggggatggtggtgcaccgagccgaatgcagaccagtcgtc
actgacagctacatgaagctgaagaaactgcagattaaagagtccgtcaagcctcagcgt
ttgtcacagcagctggagagagccgtcaccaccatcttcaagcctgtggccaaccatgat
ttcaatgtggagtatgagaagaaaaagaagaccgaagggaagatggtgagagctgaacgt
cagctcgtgttggacatgctcttctcggccttcgagaagcaccagtattacaacattaag
gcgctggtggacatcaccaaacaacctgtgacctacctgaaagaaatcatgagggaaatc
ggcacatacaacagcaaaggcgctcacaaaagcacctgggaactgaagccagagtaccga
cactaccaatctgctgaggaggaagaggaggagatgcagaccacctag
DBGET
integrated database retrieval system
