| Entry |
|
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| Symbol |
ddx28
|
|---|
| Name |
(RefSeq) probable ATP-dependent RNA helicase DDX28
|
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| KO |
|
|---|
| Organism |
onl Oreochromis niloticus (Nile tilapia)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:onl03009]
100699709 (ddx28)
Enzymes [BR:onl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100699709 (ddx28)
Ribosome biogenesis [BR:onl03009]
Eukaryotic type
Other ribosome biogenesis factors
100699709 (ddx28)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
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| LinkDB |
|
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| Position |
LG1:27690009..27692460
|
|---|
| AA seq |
561 aa
MQAVKVAHLALVASRALGSRRLCCCELFKASACLRSLGQSRFCQTGAETAVIRIPRYLQR
RVENVKEIRSKSKINTIKAGKLLIQSKNPALNQSAGYILGKFEQPSLCSKGWKHSKSFGD
YFSINNVKAVAPYVAENWNEDGGQKPLATFNNLHICKELVETLETLSIKHPTTVQLQTIP
KVMRGHNVLCAAETGSGKTLSYLLPVIHRLQADKESESYSESAHKICTVVLVPSRELAEQ
VAAVSRTLCAPFGFVTRTVGGGRGVGHIKTVFRRDHPDILVATPGALVKALRRRCLDLSE
LRFFVVDEADTMFDPSFSDMLENILLHVNVASDPKETRGLGHKAQLLVVGATFPGGVGDV
LSKVTDLGKIVIIRSKMLHFLMPHVKQTFLKVKGADKILELHQALKLLQQDRGGGALLVF
CNKSSTVNWVGYSLEEMGVKHARLQGEMPAAVRAGIFRSFQKGNVDVLICTDIASRGLDT
SRVRLVVNYDFPESHTDYIHRAGRVGRAGGVEDGEVLSFVTHPWDVELVQKIETAARRRL
SLPGMESDIHEPKPITLNEME |
|---|
| NT seq |
1686 nt +upstreamnt +downstreamnt
atgcaggctgtgaaggtcgcccatctggctttggtagcgtccagagctctcggatcaaga
agattgtgttgctgtgagctttttaaagcgtcggcttgccttcggtctctcggtcagagt
cgcttctgtcagactggagcagagaccgcggtcattcgtattccccggtacctgcagaga
cgcgttgaaaacgtgaaggaaattcgaagcaaaagcaagatcaacaccatcaaagctgga
aagctcctcatccagagcaagaacccagctctgaaccagtctgccggatacatactggga
aaattcgagcagccttctctttgctccaaaggatggaaacatagcaaatcattcggtgac
tatttcagcatcaacaacgtcaaggctgttgcaccttatgttgctgaaaactggaatgag
gacggtggacagaagccgctagccacttttaataatctccacatctgcaaggagctagtg
gagactttagagactctcagtattaaacatcccaccactgtgcagcttcagaccatcccc
aaagtcatgagaggtcacaatgtactctgtgctgctgagactggcagtgggaagacgctg
agttatctcctacctgttattcacagactgcaggctgataaggagtctgaaagttactct
gagagtgcacacaagatatgcactgtggtactcgtgccttcaagagagctggcggagcaa
gtggcagctgtgtccaggactctgtgtgcgccatttggtttcgttacaaggaccgttgga
ggaggacgaggtgtgggacacatcaagacagtcttcaggagggatcatccggatatttta
gtggctacgccaggtgctctggtcaaggccctgcggaggcgttgtctggatttgagtgag
ctgaggttctttgtggtcgatgaggctgacacgatgttcgaccccagcttttctgacatg
ctggagaacatcctgctccacgtcaacgttgctagtgatcccaaggaaacacgtggcctg
ggtcacaaagcacagctcctcgtggttggggcaacttttccaggtggtgtgggcgacgtg
ctcagcaaggtgacggatcttggaaaaatagttattatcaggagcaagatgctgcacttt
cttatgccccatgttaaacagacattcctgaaggtaaaaggtgcagacaagatcctagag
ctccaccaagctctgaagctgctgcagcaagacagaggtggaggcgcacttctggtgttc
tgcaacaaatcttccaccgtcaactgggttggatactcgcttgaagagatgggggtaaag
catgcacgtctccaaggggagatgcctgctgctgtgcgtgccggaatcttccgttccttc
cagaagggcaatgtagacgtgctaatatgcacagacattgcctcacgtggcctggacaca
tccagagtgcgcttggtggtcaactatgacttcccagaatcccacacggactatatccac
cgagcaggcagagtagggagagcaggtggtgtagaggatggggaggtcctcagctttgtc
acccatccctgggatgtggagctggtgcagaagattgagacagctgcacgcaggagattg
agcttgccaggcatggagtctgacatacatgaacccaagcccattacattaaatgaaatg
gagtag |
|---|
