Oreochromis niloticus (Nile tilapia): 100699796
Help
Entry
100699796 CDS
T06104
Symbol
vps35l
Name
(RefSeq) UPF0505 protein C16orf62 homolog isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100699796 (vps35l)
Membrane trafficking [BR:
onl04131
]
Protein recycling
Others
Retriever complex
100699796 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
100699796
NCBI-ProteinID:
XP_013128253
Ensembl:
ENSONIG00000019720
LinkDB
All DBs
Position
LG8:22229715..22240578
Genome browser
AA seq
967 aa
AA seq
DB search
MAAVQWRSRGRNYDAELQRCGLEAALVDFGDYHPLKPIMVTDTKTRRGTRKGSTSSSSSS
SSSAPPDPLSSMLDGTDPLSMFAAASASETPAMSHSSSTGDLGRRKREKEEEAVGPDFEP
WSLKRGEILARFTTTEKLSINLFMGSDRGKATSQGSAVSEKVRTRLEELDDLEEGSQREL
LNLSQQDYANRIEELNQSLKEAWSSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITD
ILDTFGRLVYDRIWTMCSDPRPLPDNFTVEDVNDTAKETCLNWFYKIASIRELLPRLYVE
AAILKCNRFLNKSAIQETLPRLTAMIRGIGDPLVAAYARAYLCRVGMEVAPHLKDSLNRN
FFDLLGTFRQISSENVRAQLVLQMVEMPEYLTLYSPAISWILQCIAYRAPESLLTEMMER
CKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLASADP
PESERLTILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTILADIIKHMTPDR
AFEDAYPQLQSVIRKILTYLHDFSVLFSMERFLPFLDMFQKDSVRVEVCKSIMEVFIKHQ
VELTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFEQQLSFC
VEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGNHSRKTAAFVRACAAYSFITIPSLSS
IFSRLSLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFIN
SFLATLLVIPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQETYL
YSIPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKTLGRDEQSTRRQGALAFSLFG
VLLAHSDLRNNKLSQLAVNLWNLSHKHGYCETRTSVRTLEFIKHQTQQPDMAHLSDMVQR
LTLQSRT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagtggcgttcccgtggccgcaactatgacgcagagctgcagaggtgt
ggtcttgaggccgctcttgttgattttggagactaccacccactcaaacccatcatggtg
actgatacaaagacccgccgtgggacccgcaaaggcagcacctcttcctcttcatcttcc
tcttcctcagcaccgccagaccctctgagctccatgctggatgggaccgaccccctctcc
atgtttgcagcggcctcggcaagtgagacgccagccatgtcccacagcagctccacagga
gacctggggaggaggaagagagagaaggaagaagaggcagtcggaccagattttgaacct
tggtcactgaagcgaggggaaatcctggccaggttcaccaccaccgaaaaactctccata
aatctgttcatgggctccgacagaggaaaagccaccagtcaaggatcggctgtttcagag
aaggttcgcactcgtctggaggagctggatgatctagaggagggctcccagagagagctg
ctgaacctctcgcaacaggattacgccaaccgcatcgaggagctgaaccagtccctaaag
gaggcctggtcctctgaccagaaggtcaaagccctgaagattgtcatccagtgctccaag
cttctgtccgacacctcggtgatccagttctaccccagcaaatttgttctcatcactgat
atccttgacacatttggccggctggtgtacgacaggatctggaccatgtgttcagaccca
cgacctttaccagataatttcacagttgaagatgtgaatgacactgcaaaggagacgtgc
ctcaactggttctacaagatcgcctccatcagagagctccttcccagactctatgttgaa
gctgccattctcaagtgcaaccgcttcctcaacaaatccgccattcaggagacccttcct
cggttgactgccatgatcagagggattggagaccctcttgtggctgcatatgccagagct
tacctctgcagggtgggcatggaggtggccccccacctgaaagacagcctgaaccgcaac
ttcttcgacctgctcgggacttttcgacagatcagcagcgagaacgtccgggcccagctg
gtgctgcagatggtggagatgcccgagtacctgacactctactcacctgccatcagctgg
atcctgcagtgtatcgcgtacagagctccagagtctctgctaacagagatgatggagaga
tgcaagaaactgggaaacaatgctttgcttttgaattcagtaatgagggcgttcaggcca
gagtttgttgcagccagagccacagacttcatcggtatgatcaaagactgcgacgaggcc
ggcttcccaaagcatctgttgttcggatctctgggacgcagcctggcgtctgccgatcct
ccagaatccgagaggctgacgatcctgaatgaagcctggaaagttatcaccaaagtccgc
agtcctcaggactacatcaactgtgctgaaatctgggtggagtttacctgcagacacttt
acaaaacgggaggtcaacacgattttggctgacatcatcaaacacatgacccctgaccga
gcattcgaggacgcctaccctcagctgcagtcggtgatcaggaagatcctaacttacctc
cacgacttctccgtcctcttctccatggagcgattcctgcccttcctagacatgttccag
aaggacagcgtgagggtggaggtctgcaaatccatcatggaggtcttcatcaaacaccag
gtggagctcaccagagacccagtgatcctcaacgccatgctgcacatctgcaagaccatg
cacgactctgtcaatgctcttactctcgaagacgagaaaagatctttggctctgctgatc
atcggcttcatccgcatggtttcctttggtcgtgactttgagcagcagttgagtttctgt
gtggaggctagagccaccttctgtaacctggagcctgtcctggtgcaactcattcatacg
gtgaaccagctggccatggagaccaggagggtgatgagagggaatcactcccgcaagact
gctgctttcgtcagagcatgtgccgcctacagtttcatcaccatcccatctctcagcagc
atcttcagtcgactcagcctctatctgttgtccggtcaggttgctttggccaatcagtgt
ctgtcccaggccgatgctttcctaaaggcagccgtaagcattcttccggaggttcctcgc
tccatcagcgtggagggaaaacttcgctcttctgaaagcttcctcctggactttatcaac
agcttcttggcaacgctgctggttatcccggaccatccagagcatggggtgctctactta
gtccggggtctgctcaacatggtccaggattatacctgggaagacaacagcgatgcaaag
gtgcgggtttacatcagtgctctgcccctgctggcagccatgagccaggaaacctatctg
tactctatccccaaagtggattctaatgagacgctctatggtggagatcccaaattccta
tcagagatcaacaagctgtgtgagactctgattggacagatcctcgaccacctgaagaca
ctcggtcgtgacgagcagagcacacgccgccagggcgctctggccttctccctgtttggt
gtcctgctggctcacagtgatctgaggaacaacaagctgagccagctggcagtcaacctt
tggaacctcagccacaaacatggatactgcgagacacgcacctccgttcggactctggag
tttatcaaacatcagactcagcagccggacatggctcatctgtcagatatggtccagagg
ctcacgctgcagtcccgcacctga
DBGET
integrated database retrieval system
