Oreochromis niloticus (Nile tilapia): 100699925
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Entry
100699925 CDS
T06104
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100699925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100699925
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
100699925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100699925
NCBI-ProteinID:
XP_003445855
Ensembl:
ENSONIG00000003420
UniProt:
I3J618
LinkDB
All DBs
Position
LG1:14009538..14036912
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AA seq
682 aa
AA seq
DB search
MGRTPHRDQKEEKKERRSSITAGSALDKSNEPFSWEEYLRETSSTAASPSCFKQSRVPPS
NDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSLDIQPIGT
CERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKEPASPAKNYFQPGMKLEA
VDRKNPYLICPATVGEVRGQEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCALTKHNLQPP
GNFFTLPGALLAPVSSTSSTRRSSFNSSSMQTSYRLPNPLPPLPVRKGVRGRRPKSQTIA
LLKAAAEAAAAAAAVNGASQSPARTSTETQLAPRPHKKRGPKPKNKKKPRVVQSLGASSV
TAPPPETRLSISHVSADNNNLNNSTNVVCTVCVYVNKHGDYGPHLDRKLVQQLPDHFGPA
PVNAVLQQAVQACVDCTYQPSVLLSFLQSQSHTGGEVIRVRSEHGIRYVKLPSASSASSV
LRFLENMCQHLESDSLFSSQPFSPYSNNTRFYNRAKSEPLSVAENGLPNNDSSKDPTPSP
RPLHNTPDYRAAKRERPYYPGHAQTPPPLRRVSSNPTEPGPVCAHRRVEAASSTTGPDHM
KQDKDASGNSASSWSVDDVIRFVQEADPHTLGPHVELFRKHEIDGKALMLLRSDVIMKYM
GLKLGPALKLCHHIEKLKQTKQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaacgccacacagagatcaaaaggaggagaagaaggagagacggagcagcatc
acagcgggctctgctctcgacaagtctaatgaaccgttcagctgggaggaatatctgaga
gaaacttcctccactgcagcgtcgccctcttgcttcaaacagtccagagtccccccctcc
aatgacttcaaggcaggtatgaaacttgaagcacgggaccctcgcaactctaactcggtg
tgcatcgcaacggtgatggggatgatgggcactcggctacgcctgcgtctggatggtagc
gacaacaccaacgatttctggcggctggtcgactcgttggacatccagccaataggaacc
tgtgagaggaacggagacatgctgcagccgccgctcggtttcaggatgaatgcatcctcc
tggcccatgttcctcttacggacgctcagcggtgcagagatggccccagcttcggctttt
aagaaggaacctgccagccctgccaaaaactactttcagcctggtatgaagctggaggct
gtggacaggaagaacccttacctgatttgtcccgccacggtgggtgaggtcagaggtcag
gagatttttgtcatgttcgacggctggcgaggcgcctttgactactggtgccccttcgac
tccagagacatcttccctgtcggctggtgtgccctgacaaaacacaacctgcagccaccc
ggaaacttctttaccctccctggtgccctgcttgcccctgtttcttccacctcatctaca
cgtcgctcgtcttttaactcctcctccatgcagacctcgtaccgactgcccaaccccttg
cctcccctccctgtacgcaagggtgtccgcggtcgtcgtcccaaatcccagactatcgct
ttattgaaagcagcggcagaagctgcagcagcagcagcagcggtaaatggagcgtcacaa
agcccggccagaactagcactgagactcaactggcccccagaccacacaagaagagagga
cctaagcctaagaacaagaagaagcctcgggtggtacagtccctgggggcgtcatcagtt
acagctccacctccagagaccagattgagtatcagccacgtctcagcggacaacaacaac
cttaacaacagcacaaatgtagtttgcacagtgtgtgtctatgtgaacaagcacggtgac
tacggcccgcatcttgatcgaaaactggtgcagcaactcccagaccacttcggtccagct
ccagtcaacgcagtgcttcagcaggctgttcaggcctgcgtcgactgcacataccagccc
tctgtactgctgtcatttctgcagagccagtcccatacaggaggagaagtcattagagtg
cggtcagagcatggaatccgctatgtgaagctgccctctgcctccagtgcttcttctgtg
ctgcggttcctggagaacatgtgccaacatctggagagtgacagtctcttcagctcgcag
cctttcagcccctacagcaacaacactcgcttctacaatagggccaagtcagaaccgctg
tctgttgctgagaacggcctgcctaacaacgattcctctaaggatcccactccgagcccc
cgcccccttcacaacacgccagactacagagcagccaagagggagcgtccgtattaccct
ggacacgcacagacgccgccgcctctccgacgagtcagctccaaccccactgaacctggc
ccagtgtgtgcacacagacgagtggaggcagctagctcaacaacaggtccagaccacatg
aaacaggacaaagatgcttccggaaacagcgcttcctcctggtcggttgatgatgtcata
cggttcgtccaagaagccgatccccacactctcgggccgcacgtggaactgttcaggaaa
cacgagattgatgggaaggcactgatgctgctgcgcagtgacgtcattatgaagtacatg
ggtctgaagctgggccctgcgctgaagctctgtcatcacattgagaagctgaagcagacc
aaacagtag
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