Oreochromis niloticus (Nile tilapia): 100700243
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Entry
100700243 CDS
T06104
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100700243 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100700243 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100700243 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100700243 (rb1cc1)
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100700243 (rb1cc1)
Membrane trafficking [BR:
onl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100700243 (rb1cc1)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100700243 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100700243
NCBI-ProteinID:
XP_003437914
Ensembl:
ENSONIG00000009527
UniProt:
A0A669AV43
LinkDB
All DBs
Position
LG18:complement(18735187..18751819)
Genome browser
AA seq
1624 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVQELKHAIQAKYKIAIPHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLIKFNTAYTNYQH
DLEEIKVKLTKLGTAVSVMAKIPLLECLTRQSYRESMEKSSSTPEKDSDETEEEKSTDSV
LCTTEAQMHSKSSASFSASGTATCEPAEDQESNEMTDSGGLRAALLDDDTPELTNPSVFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECHDTISKLDNQNMKSIKGL
EDRLYALDQMLASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCMSHTNQLMIMLN
NHRKLLEIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDAEKLQALFRLLTELMERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKQLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRRPRRFDDELPDISLEDLQYLKSCCPVEVQPFLMLPTVCN
FEPLNHHIETLHQLVQAAQSVDEMSQTITDLLSEQRASYSQSAHRSTTLSPQSEMPATTT
PVSPKTPSSLSLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSL
DLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQD
TTILERENSKIAVLQQVIERYRIAAEESHSSLRNVKDDLCHLRGLVLKEQHDFGFVLRSM
STEVHNIVDSICQTHEQALKEQHQSELLAIRQDFEKEVKTLTEENQVNQSIVRDVQRAML
ELEGLMERKEKELTQLENERERWIQTDGIQTDKITNLEQIVSDQVEENKKLAASRDSLST
QLENLHFEIERSQQKIRQELEVVAQNNLKELEDRMKHEHKAEMETLTKDNQEALENLAVE
NSAKLSKAADHHATAIKEKDSQVKDLEARIAELAELRCKLEVELALKESETEDLKRLFEE
SRIQQEEDVKSQIEAKTKVLGEELAVVKKELQLKNEEYEVDLAELRTLMRIEKDHCISEL
VDRHEEETILLRNKLSSLQQQAQEAGRNHAEQHRKLKEELDQQLAAVCEEKEKQLNSFQE
REQELRTVISSLQQENDLLSQKVEQDRLAFEKHLEKEKATEAAAPDAFKELEHEKEEMEK
RLLGKIRQLENELHEVRSSKSDEGLSLHADGRADAGAPLSLDSALQERLQQERASLQAQM
ELMEKKKNEEIQNMKTSLIAEQQTNFNTVLTREKMKKEQIISDLTEKLHKVTQQQEKDKA
LIEKLSEDRASVMQEKKHLEEELNRLRSTALVSSAFFNPNPSAQDASEAGAAAAAAARAL
PVAGACSSEPFAETDRLASVAAIRDDEHVDSAVEASMVTVHDTTMSEEKQRIILLERTLH
MKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTL
YFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPW
NRKV
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacactgacatttgatactgacctt
gctgtccaaactgtacaggagctcaaacatgccatccaagccaaatataaaattgcaatt
ccacatcaagtccttgttgttaatggaggagaatgtatggctgcagagagacgggtctgc
agctacagtgctggcactgaaaccaacccaatattcctgttcaacaaagagatgatcttg
tctgaccgggatccaacgatccctaaaaccaccttctcaattgagagtgagattcaggtc
aaggtggaggagtctcttttgatgccagctgtctttcacactgttgcctctcgaacacaa
cttgctctggaaatgtttgaagttgccaacaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgctataatggctaatctggatgactgc
accctatcttatcagaagttgcttataaaattcaacacagcttatacaaattatcagcat
gacctggaggaaatcaaagtgaaacttacaaagttagggacagcagtttcagtaatggcc
aagatacctctgctggaatgtttaacacgtcagagttacagagagagcatggagaagtcc
agctcaacccctgaaaaggattcagatgagacggaagaagaaaaatccactgactctgtg
ctctgcacaactgaagcacagatgcactccaagtcatcagcatccttctccgcttcaggg
acagccacttgtgagccagctgaggaccaggaatcaaatgaaatgactgacagtggtggc
ctgagagctgcactattagatgatgacacaccagagctcaccaacccgtccgtcttcaat
gttacattattagattggatcaacgtccaggacaggcccaatgatgtggaatcagttgta
aggaaatgttttgactccatcaataggcttgacccgcggatcattcagcctttcctaaca
gaatgtcatgacacaatttccaagctagataatcaaaacatgaaatccatcaaagggctt
gaagacaggttgtatgctctagaccaaatgcttgcaagctgcaagaagttggtgaatgaa
cagaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggat
acatctgttctgcctgatttgtgtatgagtcacaccaaccagctgatgatcatgctgaac
aaccacagaaagctgctggaaattaaaaagaagtgcaccactgccaaacaagagctagca
aacaaccttcaagtcagacttaaatggtgctgctacgtgatgcttcatgcagaccaggat
gcagagaagcttcaggctctattcagacttctaactgagctaatggaaagagtgagggtg
gtggaggccctcagtaccgtgccccagatgtactgcttggcagtcgttgaagtagtcagg
agaaaaatgttcatgcgccactacagagagtgggccaatgcacttgtcaaggatggaaaa
caactgtatgaggcagagaaatttaaacgggaatcctttgggaaactctttcgaaagtct
tttctccgaaatcggttgtttagaggacttgattcatggcctccaacatcattttgtaca
cgaaggccaagaaggtttgatgatgaacttccagacatctcacttgaggacctgcagtac
ttgaaatcttgttgtcctgttgaggtgcagcctttcctcatgcttcccacagtgtgcaac
tttgagcccttaaatcaccacatagagacacttcaccagctggtccaagctgcgcagagc
gtggatgagatgtcacagacaattactgacctgctaagtgaacaaagggcatcttatagt
cagagtgcccacagatcaactacattgtctcctcagtctgaaatgcctgctaccacaaca
ccggtgtcgcccaaaactccttcctctctcagccttcagggccccagctgccaacccctt
catgttcctgtcccagctcctctagaggacttatcgccagacagcattgatgcacaaaca
tttgactttgaaaccattggccatccaaacatggatccagtcctacagcagggatccctt
gatttagattctctggcagaaagccctgaatcagacttcatgtctgctgtcaacgagttt
gtgattgaagagaacttgacctctccgaaccctatcagtgatcctactagccctgaaatg
atggtggaatctttgtattcatcagtcattaatgctattgataacaagcgaatgcaagat
accacaatactagagagagagaactcaaagatcgctgttcttcagcaagttattgagagg
tatcgaattgctgcagaggagtcccattccagcttaagaaatgtaaaggatgacctgtgt
catttacgaggtctagtattaaaagaacaacatgactttggctttgttctgcgtagtatg
agcacagaggtgcacaatattgtggacagcatctgccagacccatgaacaagcgctgaag
gagcagcatcaaagtgagcttctggccatacggcaggactttgagaaggaggtaaagaca
ctaaccgaggaaaaccaagtaaaccagagtattgttagagatgttcagcgtgcaatgctg
gagcttgaagggcttatggagcgcaaggagaaggaactgactcagcttgagaatgagaga
gagcgatggattcaaacagatggtattcagactgataagatcaccaacctggaacagatt
gtcagtgatcaagttgaagaaaataagaagcttgcagcctcgagagactctttgtccact
cagcttgagaatctgcactttgagattgaacgcagtcagcagaagatccgacaggagctg
gaagttgttgcacagaacaatttaaaagagttggaggacagaatgaagcatgaacacaag
gcagaaatggagaccctgaccaaggataaccaagaggctctggaaaatcttgctgttgaa
aatagtgctaagttaagcaaggcagctgatcaccatgccactgctataaaagagaaggac
agtcaggtcaaggacttggaggctcggatagctgagcttgcagaactccgctgcaagtta
gaggtggagttagccctcaaagaatcagagacagaagacttaaagcgcttgtttgaggag
tccaggatacagcaggaagaggatgtcaaatcccaaatagaggctaagaccaaagttctt
ggtgaagaactggcagttgtcaaaaaagagcttcagctaaagaatgaagagtatgaagtg
gacctagcagagcttaggactctcatgaggattgagaaggaccactgcatctcagagctt
gttgacagacacgaagaggagactattttgttgaggaacaagctctcttccctgcagcag
caagcccaggaggctgggaggaaccacgctgagcagcatcggaaacttaaagaggaatta
gatcagcaactggctgctgtctgtgaagaaaaagaaaagcaactgaatagtttccaagaa
cgggagcaggagttgaggactgttatcagcagtttgcagcaagaaaatgacctgctttcg
caaaaagtagagcaggacagacttgcatttgagaaacatttagagaaagaaaaggccact
gaggctgcagcaccagatgcctttaaagagttagagcatgagaaagaggagatggagaag
agactcttaggcaagattagacaacttgaaaatgagcttcatgaggtccggtcctcaaaa
agtgatgaagggttgtccctgcatgctgacggacgtgcagatgccggagcacctctgtct
ctagactcagcactacaagagcgtctgcaacaggaaagggcctctctgcaggcacagatg
gagctcatggagaaaaagaagaatgaggagatacagaatatgaaaacatcacttattgca
gagcagcagacaaatttcaacacagttctaacacgagagaagatgaaaaaggagcagatc
atcagtgatctcacggagaagttacataaagttacccagcagcaggagaaagataaagct
ctgatagagaaactgtctgaggatcgggctagtgtgatgcaggaaaagaaacatttggaa
gaggagctcaaccgtttgcgcagcactgcactggtctcctctgccttcttcaaccctaac
ccctcagctcaagatgcctcagaagccggggcggcagcagcagcagcagctagagctctg
cccgttgctggggcttgttcttctgagcccttcgctgaaactgacagattggcctctgtg
gcagccattcgagatgacgaacatgttgattcagcagtggaagccagcatggtgaccgtc
catgatactacgatgtcagaggagaaacagcggataatcttacttgagaggactttgcac
atgaaggaagaagaaaacaagcgtctcagtcaaagactgatgtctcagagcatgtcgtct
gtgtcatcacggcattcagacaaaatcgccatcagagatttccaggtaggcgatttggtt
ctaatcatcttggatgaaaggcacgacaactacgtgctcttcacagttggtcccaccctc
tacttcctccattctgagtctcttactgcactggacctcaaaccagcatcagggacctca
agacggccgtgggtgcttggaaaggtgatggagaaggagtattgccaggcaaaaaaggcc
cagaacagattcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatgg
aatagaaaagtataa
DBGET
integrated database retrieval system
