Oreochromis niloticus (Nile tilapia): 100700340
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Entry
100700340 CDS
T06104
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100700340 (vps52)
Membrane trafficking [BR:
onl04131
]
Protein recycling
Others
EARP complex
100700340 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
100700340 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF3440
MscS_porin
Motif
Other DBs
NCBI-GeneID:
100700340
NCBI-ProteinID:
XP_013123062
Ensembl:
ENSONIG00000007398
LinkDB
All DBs
Position
LG22:237869..252828
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AA seq
724 aa
AA seq
DB search
MAEGTATAAGAGPDVNTAGNPTEVAMAYLQDEKTEADIANLNLGELDITTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVEAELQRIEQASIKDYIKESQNIALLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
AMISTILDSPVTEQEFLEQLHELNTKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPAEL
EGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREYLFLSDFFMVAGNSALDLFNSIM
GKTLSMFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITAKRNIPALDKYWEAVLELLWPR
FELILEMNISSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQL
QIEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLLARTQE
FIEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNDEARITQLVRGFSSTWKQSVEAMSQD
VMRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaaccgcgaccgctgctggagctgggcccgatgtaaacacagctgggaac
ccgacagaagtcgccatggcgtatttacaggacgagaagactgaagcagacatcgctaac
ctgaacctgggagagctggacatcaccaccgacgagtttatcctggatgaagtggacatt
cacattcaggccaacctggaagacgacctggtgaaggaagcgctcaaaacgggtgtcgac
ctccgtcagtactccaaacaggtggaggcagagctgcagaggattgaacaagcctccatc
aaagactacatcaaagagagtcagaacatcgccctgctgcacaaccagatcactgcctgt
gactccatcctggagcgtatggagggcatgctgagcggcttccagagcgacctgtcctcc
atcagcagtgagatccagaccctgcagcagcagtcggttagcatgaacgtgcggctgaag
aaccggcaggccgtgcgcagccacctcagccagctggtggacgagctggtggtgcccgga
gccatgatctccaccatcctggacagtcctgtgacggagcaggagtttctggagcagctc
cacgagctcaacactaagatcaactttgccaaagagctgagcttcagagagacgctggct
tgctccgacatccaggacatcgtcgaccgcctcaaactcaaggcggtgtcaaagatcaga
gagttcattcttcagaagatttactccttcaggaaaccgatgaccaactaccagatccca
cagaacactctgctgaagtaccggttcttctaccagttccttctggccaatgagagaacg
gttgccaaggagatcagagacgagtacgtggacaccatgagcaagatttactacagttac
ttcaagtcgtacagcggcaggctgctcaaagtgcagtacgaggaggtggcagacaaagac
gacctgatgggagttgaggacacagccaagaaaggtttcttctccaaaccgtctctgaag
agcaggaacaccatcttcactctgggccagaggggggccatcctgagcccggccgagctg
gaggggcccatcctggtcccgcacacggctcagagaggagacagcaggtatccctatgag
acgctgtttcgcagccagcactacgctctgctcgacaacggctgcagagaatacctcttc
ctgtcagacttcttcatggtggctggaaactccgccctcgacctcttcaacagcatcatg
ggaaagactctcagcatgttcctgaagagcatgtccacctacgtgtccgactgctacgac
agcatcgccgtcttcctctgcatccacatcatcctccggttcagagccatcacggccaag
aggaacatcccagctctcgacaagtactgggaggcggtgctggagctgctgtggccgagg
tttgagctcattttggagatgaacatcagcagcatcagaaacacagaccctcagaaactg
ggagtactggacaccagaccgcactacatcactcgccgttacgcagagttctcctcagcc
atcgtcagcatcaaccagacgttccccaacgagaggaccaacgctctgctgggacagctg
cagattgaggttgaaaactttgtgctgaagatggcggcagagttcccgtcgaggagagat
cagctcatcttcctcatcaacaactacgacatgatgctcagcgtcctcatggagagggca
gcagacgacagtaaagaggtggaaggcttccagcagctgctgctggccagaactcaggag
ttcatcgaggagattctctctccgccgttcggagggatgatcgcctttgtgaaggaggcc
gaggcgctgatggagaaagggcagctggaccggctgaagaacgacgaagctcgaatcact
cagctggttcgggggttttccagtacctggaaacagtcggtggaggcgatgagtcaggac
gtcatgaggtccttcaccaacttcaaaaatggaaccagcatcatccagggcgccctgacg
cagctcatccagtactaccacggcttccacaaagtcctgaaccagcccacgttccgcagc
ctggccgtccgctccgagctcatcaacctccaccacctcatggtggaggtcaagaagcac
aaacccaacttctaa
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integrated database retrieval system
