Oreochromis niloticus (Nile tilapia): 100700618
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Entry
100700618 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100700618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100700618
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100700618
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100700618
NCBI-ProteinID:
XP_025753814
Ensembl:
ENSONIG00000005182
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All DBs
Position
LG14:complement(16874221..16906262)
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AA seq
578 aa
AA seq
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MKRKSIQRDTQPKVEERGHWGNKVEFLLAVAGNIVGVGNVWRFPYLCYKNGGGAFLVPYL
AFAVTCGVPVFLLETTIGQFTQEGGITCWRKLCPLAEGIGFGGQLILFYNCMTYIIILSW
ALLYLVFSFSSQLPWASCNNYWNTEGCVDFSTQNNTVHWTNQTNSTSAATEFWERRVLMI
SGGIEEIGSIQWEVLLCLSAMWIVCYFCIWKGVRSTGKVVYVTATFPYVMLLILLIRGLS
LPGALEGVMFYLLPEPSRLMDPQVWMEAVSQIFFSYSIGLGSLTVLGSYNKYNNNCYKDS
LMLCLLNSGTSVVAGFAVFSVLGFMAHEQGVPIAEVAESGPGLAFIAYPQAVAMMPLPQL
WSICFFVMLILLGLDSQFVNMEVLMTSFIDVFPKVLRRAGRREIFLLLFCLICFFSQLVM
VTEGGMFVFQLFDYYACNGACLLFLCVFETLALGWIFGVDKLYDIIKDMTGTRANYFFKL
CWLYLTPLVSLGSFICSLIEYQPLTFNRWYVYPSWAYVLGWILALSSILLVPGWALYKLG
TGTGTLSQRFHHLCQPNLENLENQKRETELETIRELLQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaatctatacagagagacacacagccaaaggtggaggagcgaggacactgg
ggaaataaggtcgaatttctccttgctgtggcaggaaatattgtcggcgtggggaacgtg
tggaggtttccctacctctgttacaaaaatggagggggtgcattcctggtgccatatctg
gcatttgctgtaacctgtggtgtacctgtgttcctgctggagacaactatagggcagttc
acccaggagggtggcattacctgctggaggaagctttgcccactagcagaagggattggc
tttggtggacagctaatcctcttctataactgtatgacctacatcattattctgtcctgg
gctttgctctacctcgtgttctccttcagctctcagcttccttgggcctcctgcaacaac
tactggaacacagagggctgtgtagacttttcaacacaaaataacaccgtccactggacc
aaccagacaaactcgacctctgcagccaccgaattttgggaacgacgagtgctgatgatc
tcagggggcattgaggaaataggcagcatccagtgggaggtgctgttgtgcctcagtgct
atgtggatcgtctgctacttttgtatctggaaaggagtcagatctacaggaaaggtggta
tatgtcacagctaccttcccctatgtgatgttgttaattctgctgattcgtggcctctct
cttcccggagcattagaaggagtgatgttttatcttctgcctgaaccctcacgactaatg
gaccctcaggtgtggatggaggctgtgagtcagatcttcttctcctacagtatcggtttg
ggttccctaactgtgctgggaagctacaacaaatacaacaacaactgctataaagattct
ctgatgctgtgtttgctgaacagtggtaccagtgttgtagctggttttgctgtcttctca
gtgctgggattcatggctcatgagcaaggcgttcccattgcagaagtggccgagtcaggt
ccaggcctggcgttcattgcataccctcaggctgtagccatgatgcccctgcctcaactg
tggtccatctgtttctttgttatgctcattctcttgggtctggattcacaatttgttaac
atggaggtgttgatgacgtccttcatcgatgtgtttcccaaagtgttgcgcagggccggc
cgaagggagatttttctccttctcttctgcctaatatgcttcttctctcagcttgtcatg
gttactgagggagggatgtttgtgttccagttgtttgactactatgcttgtaatggagcc
tgcctcctcttcctatgtgtgtttgaaactctggcactcggttggatatttggggtagat
aagttgtatgacattataaaggacatgacaggaacacgagccaattacttctttaaactc
tgctggctctacctcacaccactggtctcactgggctcttttatatgttctttaatcgag
taccagcctctgacctttaatcggtggtacgtctacccatcctgggcatatgtgctgggg
tggatactggctctctcctccatcctgcttgttccaggatgggccctgtataagctgggc
actgggactgggactctaagtcagcgtttccatcatctgtgccagcctaatcttgaaaat
ttagagaaccaaaagagggaaactgagctagagaccatcagagaacttctgcagtag
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