Oreochromis niloticus (Nile tilapia): 100700620
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Entry
100700620 CDS
T06104
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03272
Virion - Hepatitis viruses
onl04145
Phagosome
onl04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100700620 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100700620 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100700620 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100700620 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100700620 (scarb1)
Membrane trafficking [BR:
onl04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100700620 (scarb1)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100700620 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
100700620
NCBI-ProteinID:
XP_005449529
Ensembl:
ENSONIG00000011465
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All DBs
Position
LG7:complement(9558467..9573868)
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AA seq
507 aa
AA seq
DB search
MAIKRPKVAIGFIVAGVLMVVFGTIMCFVVPLVIDDQIVKNTVIDPKNDLTYTMWKDIPV
PFFMSVYFFNVLNPAEILKGEKPMVEQRGPYVYRKQCQKENITFHPNGTVSYREYRQYHF
EPSMSAGNESDVVTIPNMLVLGASVMMENLPYVLRLMMSATFKTFKEGAFLTKPVGELMW
GYDSGLVDFLNQYLPGMIPTSGKFGLFSEFNNSNTGLFTVFTGKDDIRKVHRVDSWNGLT
ELPYWRTAQSNMINGTAGQMWPPFMTKESTLPFYSPDACRSMELVYQRPGEMYGIPLYRY
VAPKTLFANGTDYAPNEGFCPCRQSGLLNVSTCRHNSPVFISHPHFFNADPVLLDYVQGL
NPSEEKHGLFIDIHPQTGVPLNVSIRLQLNLYMKKVSGITETGKISDVVMPMIWFEENGY
IDGPIVNTFHTNLVVLPTVLEYLQYILIGLGLATIIVAAVVYHKVKRSNLNVSVSSTFIE
NVGAAQKEPVKGSHGLETKKKSISTSD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaaacgacctaaagtcgctattggattcatagtggcaggtgtgctgatggtg
gttttcggcacaattatgtgttttgtggtaccattagtcatcgacgatcaaatagtaaag
aacacagtaattgatccaaagaatgatctcacatacaccatgtggaaagacatccctgtg
ccgttctttatgtcggtctacttcttcaatgtcctcaatcctgctgagatactgaaggga
gaaaagccgatggtggaacagagaggaccttatgtttacagaaagcagtgtcagaaggaa
aacattacgttccatcccaatggtacagtgtcctacagggaatacagacagtaccacttc
gagccctccatgtctgctggaaacgagtctgatgttgtcacaattccaaacatgttggtg
ttgggtgcatcagtgatgatggaaaacttgccctacgtgctgcgcctcatgatgagtgca
acctttaaaacttttaaagaaggtgccttcctgaccaagcctgtaggggagcttatgtgg
ggttatgacagtggactagtggattttctaaatcaatacctgccaggaatgattcccaca
tcaggaaaatttggcctcttttcagagttcaacaactccaacactggcctgttcactgtc
tttactggaaaagatgacattagaaaagtccacagagtggactcttggaatggtctgaca
gagctgccgtactggaggactgctcagtctaacatgatcaatggaacagctgggcagatg
tggcctcctttcatgacaaaagagagcactttgcctttctacagccctgacgcctgcagg
tctatggagctggtttatcagcgtcctggagagatgtacgggatccctctatatcgatat
gttgcacccaagaccctttttgccaatgggacagattatgctcccaatgaaggcttctgc
ccctgtagacagtctggactcctcaatgttagcacatgccgccacaactctccagttttc
atctctcatcctcacttctttaatgctgatcctgtgctgctggactacgtgcagggtctt
aatcccagtgaggagaagcacggcctcttcatagacattcacccacaaacaggtgtccct
ctgaatgtgtccatccgcctgcagctgaacctctacatgaaaaaagtctcaggaattact
gaaactggaaagatttctgatgtggtgatgcctatgatctggtttgaggagaacggatat
attgatggccccatcgtcaatacattccatacaaacttggttgttctacctactgttttg
gaatacctacagtacatcctcatagggcttggtctggcaaccatcatcgttgctgctgtg
gtgtatcacaaagtgaagcggtctaacttaaatgtttcagtgagctccacatttattgag
aatgttggggcagcccagaaagagccggtaaaaggctcacatggccttgaaacaaagaag
aaaagtatcagtacttcagactaa
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