Oreochromis niloticus (Nile tilapia): 100700665
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Entry
100700665 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl02010
ABC transporters
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100700665
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100700665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100700665
Transporters [BR:
onl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100700665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
R1_ABCA1
ABC_tran
AAA_21
Motif
Other DBs
NCBI-GeneID:
100700665
NCBI-ProteinID:
XP_025752881
LinkDB
All DBs
Position
LG12:complement(13146001..13180668)
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AA seq
1772 aa
AA seq
DB search
MSPVTVEELLNARLNFQTTLAVVEMQLKDMVCNRSILEQLLTVDGGEAAMTDLQTQMCDL
PADVLQETERLFLSQLDLTKFLTRDRLMANAGELRAISQAVTSVSQELTALLDDIASLSS
FADMSAALRVLSPENRTAMPRESFRAFSKIVCGHHELDGERIPSLNWYEDNDIKSFLGKN
GTEDVNVEHNNNTTPFCKNLVQALESIPLSRIVWRGIKPLFIGKLLYTPNTPAVQQVMKE
VNQTLEDLQIIQELNEAWLEVGPQIKSYMETSVEVKMLQDLLRQPEIAVLVNLRLEDTPW
TASRIARFLSTPSPDIPQRPGAPLTWLDIYNDINQTISTLAQVTECFSLNKLEGLETEGQ
LIERALELLEDRQFWADVVFLLPNTSSSELPPHVTYKIRMDIDDVTRTNKLKDRFWDPGP
AADPFSDMRYIWGGFVXVQDLVERPVSRVLTGDRQTTGIYIQQMPYPCYVDDVLTVEEHV
WFYGCMKGLSEAEVKAELDTLLEDVGLLHKRHKQTKNLLGGMQRKLSVAIAFAGGLYSVF
LKSQLGSGYYLTVVKREGLDTSTPSNFRISTSASSNKLPPLIKGSDSSLSEDTGLGSEDS
SSSLLSLVQHHIPGAGLVQESRREAVINLPQMAAKDSSLAILLIALDQRLTELGISSYGL
LDSTLEEIFLQVAEETGVDTEAEVQPESPHSQPPSGQGTDGHPLEAETAEPQETDLLNGD
GHGGVPATGWWLTWQQLRALFIKRWLYARRSRRGIFAQIVLPDVFVLIALLFSLIVPPFG
KCPXQLHPWMYGEQYTFFSNDDPGNPAMENLLEALLDQPGFGTKCMEKEDNMTDPQCEAG
RGGLFMRPQLSYSTWDMFSRGNWSRDRPSPECQCSTEDVYRMLPECPEGAGGLPPPQIKR
PTGDILQNLTSYNISDYLVKTYAQILHNSLKTKKWVNEFRYGGFSLGGRAVSQTQYLQDS
VMAIRTRFRVPQNSSLGNLLHRLPEVLGGLNSENNVKVWYNNKGWHAMVSFVNVMNNGLL
RASLPPGPERRKHGITAYNHPLNLTKEQLTEVTMMTTSVDVLVSICVIFAMSFVPASFIL
FLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTIPAIMVVLIFISFQQQSYVSETN
LPALILLLLFYGWSITPLMYPASFVFTVPSTAYVFLTSNLFIGINGSIATFVLELFVAEY
LNEVNRILEVFLIFPHFCLGRGLIDMAKNQAMVDAFKRLGTKPSLDPLQWDFVGKNLFAM
AVEGVIFFIFTILLQYKFFIRYRPWWTKPELPPLGPEDEDVARXRVKSGKAHSDILTMID
LSKVYKAGRKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPVTHGEAFLSQHS
VLTEMEWVHQLMGYCPQFDAISDLLTGREHLELYARLQGVPEEFVSKVAQWGVKKLGLAQ
YADQEAGGYSGGNERKLSTAISVIGSPPVIFLDEPTTGMDPKAKRFLWNCILSVTQEGRA
VLLTSHSMEKCEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRLADTKSDPDSCP
VSAYMKECFPSIELKERHQNVLQYQLPSHACCLARVFYVLAKKYEELGIVDFSISQTTLD
QVFVNFAKDQTDDDCLTDVVVSNGTVQPNAPEHRVNPPVNKPQPPIVPPQPSKSPHLPEK
SSDSKSKAGKLKKEKSSKGKSGSVAMRALPQPEEMAREVAKVSRRASTESDGSNSGVQGE
SGKSRGSKRRASSSKDPSVLFIVGGNSEESTL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgtgactgtggaagaactgctgaatgctagacttaattttcagactacactg
gctgtagtggagatgcagctaaaggacatggtgtgtaataggagcatcctagaacagctg
ctgacagtggatggaggagaagccgccatgactgatcttcagacccagatgtgtgactta
ccagctgatgtgctgcaggagaccgagcgccttttcctgtctcagctcgacttgacgaag
ttcttgacgagagaccgtctaatggccaacgctggagaactcagggccatcagtcaggct
gtcacctcagtttcccaggagctcactgccctcctggatgatatcgcctccctctccagt
tttgcagacatgagcgcggctcttcgtgtcctgtctccagaaaatcgcacagcgatgccc
agagaaagtttcagagctttttcaaagatcgtgtgcggtcaccatgaacttgacggtgaa
cgcatcccgtcccttaactggtatgaagacaatgacatcaagtcctttttgggcaaaaat
ggcacagaggatgtgaatgtggagcacaacaacaatacaactcccttctgtaaaaatctg
gtccaggcgctggagtccatccctctgtctcgcattgtgtggagaggaatcaaacctttg
ttcataggaaaactcctctacacacccaacactcccgcagtccagcaagttatgaaagag
gtgaaccaaacattagaagacctgcagattatccaggagctaaatgaagcctggcttgag
gtgggaccacaaatcaagagctacatggagaccagtgtggaggttaagatgctacaggat
ttgttaaggcagccagagattgcagtactggttaacctgcgtttggaagacacaccctgg
acagcttcacgcatcgcacgcttcctatcgacaccctctccagatatcccacagaggccc
ggagcaccgctgacctggctggacatctacaatgacataaaccaaactatctccactctt
gcacaagttacagagtgcttctctctgaacaaactggaggggctggaaactgagggtcag
ctgattgaaagagcgctggagctactagaggacaggcagttctgggcagacgtggttttc
ctgctgcccaacacttcctcgtctgagctgcccccacatgtcacctacaagatccgaatg
gacattgatgatgtgacccgcaccaacaagctcaaagaccggttttgggatccgggtcca
gctgctgaccccttcagtgacatgcgttacatttggggtggtttcgtgtaagttcaggac
ctagtggagagaccggtgagccgagtgcttaccggagatcgacagactactggcatctac
atccagcagatgccctacccctgctatgtggacgatgtgctgacggtagaggagcatgtg
tggttttatggctgtatgaagggtctgtctgaagcagaggtgaaggcggagctggacact
ttgctggaggatgtgggcctcctgcacaagcgacacaaacagaccaaaaaccttttaggc
ggcatgcagaggaagctgtctgtggcgatagcgtttgccggaggcctttattcagtcttc
cttaaatctcagctggggtctggctactacctcactgtggtgaagagggaaggactggac
accagcactcccagtaatttccgtatttccaccagtgccagctccaacaagctccctcct
ctcataaagggcagcgactcatcactgagtgaagacaccgggctgggaagtgaggatagc
agctcatctttgctgtcgctggttcaacaccacatccctggtgccggactggtgcaggag
tctagacgtgaggcggtaatcaacctgccgcagatggccgccaaagacagcagcctggcc
atcctactgatcgcactggaccagagactgactgaactgggaatcagcagctacgggctg
ttggacagcacgctggaggagatctttctgcaggtggcagaggagacaggtgtggacact
gaagcagaggtgcagcctgaatcaccccacagccagccgccgtcaggacagggaactgat
ggccatcctctagaagcagaaacagcagaacctcaggagacagacctgctgaatggcgat
ggccacggtggggtgcctgcaaccggctggtggctgacgtggcagcagctgagagcgctc
ttcatcaaacgctggctttacgctcggaggagccgtcggggaatctttgcccagatcgtt
ctccctgatgtatttgtgctgatcgccctgctcttcagccttattgttcctccttttggg
aagtgccctnngcagttgcatccctggatgtacggcgagcagtacaccttcttcagcaac
gatgatcctggaaacccagccatggagaatctgcttgaagctctccttgaccagcctgga
tttggtaccaagtgcatggaaaaggaggacaacatgacggatcctcagtgtgaagctggg
cggggtggtttattcatgaggccacagttatcttactctacctgggacatgttcagcaga
ggcaactggagcagagacagaccctcacctgaatgtcagtgcagcacagaagacgtctac
cgaatgctccccgagtgtcctgagggtgctggagggcttccacctccacagattaaaagg
ccgactggagacatcctgcaaaatctgacaagttataacatctcagattacctggtgaag
acctacgctcaaatccttcataatagcctaaaaaccaagaagtgggtgaatgaattcaga
tatggtggcttctccctcggaggcagagctgtatctcaaacgcaatatctccaagactcg
gtcatggccatcaggactcgtttccgagtcccacagaacagttcactgggaaacctgctg
cacagactcccagaggtcttaggagggctgaacagtgaaaacaatgtgaaggtgtggtac
aacaacaaaggctggcacgccatggtgtcatttgtcaatgtgatgaacaatggcctgctg
agagcgagtctgccaccaggtcctgagaggaggaagcacggcatcactgcctacaatcac
ccactcaacctcaccaaggagcagctcaccgaagtaaccatgatgactacatcggtggat
gtcctggtttccatctgtgtgatctttgccatgtccttcgtgccggccagtttcatcctt
tttctgatcgaggagcgagtcagcaaagctaaacacctgcagtttgtcagcggggtcaaa
ccgattctctactggctggccaattttacctgggacatgttaaactacaccattcctgct
atcatggtggtgctgattttcatcagtttccagcagcagtcatacgtttctgagaccaac
ctgcccgctcttatcctgctcctcctgttctacgggtggtccataacccctcttatgtac
ccagcatcctttgtgttcactgtcccaagcacagcttatgtatttttgacctccaacctc
ttcattggaatcaacggcagcattgccaccttcgtcctggagctgtttgtagctgagtat
ctgaacgaggtgaacagaatcctggaggtgtttttaatcttccctcatttctgtttggga
cgaggacttatcgacatggccaaaaaccaggccatggtggatgccttcaaaagactgggt
accaaaccaagcctggacccccttcagtgggactttgtaggaaagaacctttttgcaatg
gcagtagaaggtgtcatcttcttcatctttaccatactccttcagtacaaattcttcatc
cgctacaggccttggtggactaagcctgagttgcctcctcttggtccagaggatgaggat
gttgcgaganngagggtcaaaagtgggaaagcacactcagacatcctcaccatgatcgac
ctgagcaaggtttataaagctggcagaaagccagccgtagaccgtctttgcctcgggatt
cctcgcagcgagtgttttgggctgcttggggtcaacggagctgggaagacttcaacattt
cggatgctgactggagatacacctgtcactcatggagaggctttcctcagccagcacagt
gtgctgacagaaatggagtgggtccaccagctgatgggttactgcccacagttcgatgcc
atcagcgacctgctcacaggccgggaacatctggagctgtacgcccgcctgcagggggtg
ccagaggagttcgtctctaaggtggcgcagtggggtgtgaagaagctggggcttgctcag
tatgcagatcaggaggctggaggctacagcgggggcaacgagaggaaactctccacagcc
atctccgtcatcgggtctccacctgtcatattcctggatgagcccaccactggcatggac
ccaaaagccaaaagatttttgtggaactgcatcctcagtgtcacccaagagggaagagct
gtactgctaacctcacacagcatggagaagtgtgaggcactttgcaccaggatggccatc
atggtcaacggcaggtttcggtgtcttgggtctgtgcagcacctgaagaacaggtttggt
gatggatacaccatcatccttcgtttggcagacaccaaatcggaccctgactcgtgtccc
gtcagcgcctacatgaaggagtgttttcctagtattgagctgaaggagcggcaccagaat
gtgctgcagtaccagctaccttcgcacgcctgctgcctcgctcgcgtcttctacgtgctg
gcaaaaaaatacgaggagctgggcatcgttgatttctccatttcacagaccacgctggac
caggtgtttgtcaactttgccaaggatcagactgatgacgactgcctcacagatgtggtc
gtcagtaatgggacagtacagccaaacgcacccgagcacagagttaatcctcccgtcaat
aaaccacaaccaccaatcgttcctcctcaaccaagcaaaagtccacacctgcctgaaaaa
tcatctgacagcaagtcaaaggcgggtaagctgaaaaaagaaaaatctagcaaaggcaaa
tctggctctgtggcaatgcgcgcactaccacagccagaggaaatggcccgggaggtggct
aaggtgagccgcagagccagcactgaatcagacggcagtaacagcggtgttcagggagaa
tcaggcaaatctcgtgggtcaaaacgcagagcaagttccagcaaagatccatctgttctc
tttatagtcggcggcaactcagaggagagcacgctatga
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